Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12487 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 1.5e-56 222.6 113 100.0
SEGI_18571 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 1.9e-27 125.9 63 95.2
SEGI_20476 Sequoiadendron giganteum HOM05D000580 ORTHO05D001785 1.9e-27 125.9 63 95.2
SEGI_40009 Sequoiadendron giganteum HOM05D005573 ORTHO05D007161 1.9e-27 125.9 63 95.2
SEGI_17366 Sequoiadendron giganteum HOM05D000216 ORTHO05D004227 2.5e-27 125.6 84 76.2
SEGI_21477 Sequoiadendron giganteum HOM05D000216 ORTHO05D004227 1.6e-26 122.9 84 75.0
SEGI_24497 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 2.4e-22 109.0 70 80.0
Medtr6g092730 Medicago truncatula HOM05D000388 ORTHO05D004227 7.3e-19 97.4 64 75.0
Medtr3g035590 Medicago truncatula HOM05D000388 ORTHO05D004227 8.0e-18 94.0 64 73.4
Sed0002050 Sechium edule HOM05D000388 ORTHO05D004227 1.8e-17 92.8 52 84.6
Sed0019997 Sechium edule HOM05D000388 ORTHO05D004227 1.8e-17 92.8 52 84.6
MELO3C027351.2 Cucumis melo HOM05D000388 ORTHO05D004227 2.3e-17 92.4 52 84.6
Sed0002396 Sechium edule HOM05D000388 ORTHO05D004227 2.3e-17 92.4 52 84.6
Medtr0002s0590 Medicago truncatula HOM05D005573 ORTHO05D007161 3.1e-17 92.0 52 84.6
QL93p0270_0008 Quercus lobata HOM05D000388 ORTHO05D004227 6.8e-17 90.9 52 82.7
FAN07G1458 Fragaria x ananassa HOM05D000388 ORTHO05D004227 8.9e-17 90.5 50 86.0
Gohir.A08G157400 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.2e-16 90.1 67 68.7
PGR111G0128 Punica granatum HOM05D000388 ORTHO05D004227 1.2e-16 90.1 67 68.7
Hund28251 Selenicereus undatus HOM05D000388 ORTHO05D009867 1.5e-16 89.7 48 87.5
DCAR_032485 Daucus carota HOM05D000388 ORTHO05D004227 4.4e-16 88.2 67 67.2
Hma1.2p1_0248F.1_g102150 Hydrangea macrophylla HOM05D000388 ORTHO05D004227 4.4e-16 88.2 67 67.2
BolSC45t60867H Brassica oleracea HOM05D000388 ORTHO05D004227 5.8e-16 87.8 52 80.8
Nn055s41933 Nelumbo nucifera HOM05D000388 ORTHO05D004227 1.3e-15 86.7 67 67.2
HanXRQChr00c0268g0572931 Helianthus annuus HOM05D000388 ORTHO05D004227 1.7e-15 86.3 54 77.8
PSO548G0079 Papaver somniferum HOM05D000388 ORTHO05D004227 3.7e-15 85.1 67 65.7
Lj2P1237T81 Lonicera japonica HOM05D000388 ORTHO05D004227 6.4e-15 84.3 48 83.3
Lj2P1238T36 Lonicera japonica HOM05D000388 ORTHO05D004227 6.4e-15 84.3 48 83.3
Lj2P1239T100 Lonicera japonica HOM05D000388 ORTHO05D004227 6.4e-15 84.3 48 83.3
Hund27844 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.4e-15 84.3 46 84.8
Hund31434 Selenicereus undatus HOM05D000388 ORTHO05D004227 6.4e-15 84.3 46 84.8
AL2G20760 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 1.1e-14 83.6 67 64.2
ATCG00360 Arabidopsis thaliana HOM05D000388 ORTHO05D004227 1.1e-14 83.6 67 64.2
EL10As12g24021 Beta vulgaris HOM05D005573 ORTHO05D007161 1.1e-14 83.6 46 84.8
CARHR282020 Cardamine hirsuta HOM05D000388 ORTHO05D004227 1.1e-14 83.6 67 64.2
Medtr4g051210 Medicago truncatula HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund08563 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund18038 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund19311 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund24075 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund27448 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund27566 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund27604 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund27660 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund27703 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund27748 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund27759 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund27801 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund27912 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28002 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28023 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28030 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28054 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28089 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28096 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28119 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28135 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28158 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28166 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28193 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28204 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28242 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28284 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28296 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28340 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28347 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28357 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28368 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28381 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28393 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28409 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28444 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28551 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28582 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28622 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28693 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund28727 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund29031 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund29057 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund29134 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund29411 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund29624 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund29675 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund29906 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund29948 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund30487 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund31284 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund31288 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-14 83.6 45 86.7
Hund15468 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.2e-14 82.0 44 86.4
EL10As20g24206 Beta vulgaris HOM05D000388 ORTHO05D004227 4.1e-14 81.6 45 84.4
LjContig00318g0022419 Lotus japonicus HOM05D000388 ORTHO05D004227 9.2e-14 80.5 45 84.4
ClCG07G007490 Citrullus lanatus HOM05D000388 ORTHO05D009867 1.6e-13 79.7 49 77.6
HanXRQChr08g0210281 Helianthus annuus HOM05D000388 ORTHO05D004227 1.6e-13 79.7 45 84.4
HanXRQChr11g0326711 Helianthus annuus HOM05D000388 ORTHO05D004227 1.6e-13 79.7 45 84.4
HanXRQChr11g0332831 Helianthus annuus HOM05D000388 ORTHO05D004227 1.6e-13 79.7 45 84.4
HanXRQChr14g0430581 Helianthus annuus HOM05D000388 ORTHO05D004227 1.6e-13 79.7 45 84.4
HanXRQChr14g0460931 Helianthus annuus HOM05D000388 ORTHO05D004227 1.6e-13 79.7 45 84.4
Gohir.A03G019600 Gossypium hirsutum HOM05D000388 ORTHO05D004227 2.0e-13 79.3 52 75.0
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 1.7e-12 76.3 42 85.7
A06p23270 Brassica napus HOM05D000388 ORTHO05D004227 3.9e-12 75.1 45 80.0
BNapus_Darmor_BZH_scaffold_253p00140 Brassica napus HOM05D000388 ORTHO05D004227 3.9e-12 75.1 45 80.0
BNapus_Darmor_BZH_scaffold_287p00050 Brassica napus HOM05D000388 ORTHO05D004227 3.9e-12 75.1 45 80.0
C09p29540 Brassica napus HOM05D000388 ORTHO05D004227 3.9e-12 75.1 45 80.0
Thhalv10011045m.g Eutrema salsugineum HOM05D000388 ORTHO05D004227 3.9e-12 75.1 45 80.0
Sed0015902 Sechium edule HOM05D000388 ORTHO05D004227 3.9e-12 75.1 48 75.0
HanXRQChr04g0099361 Helianthus annuus HOM05D000388 ORTHO05D004227 5.0e-12 74.7 48 75.0
Lsat_1_v5_gn_8_77200 Lactuca sativa HOM05D000388 ORTHO05D004227 8.6e-12 73.9 45 75.6
CsaV3_1G025470 Cucumis sativus L. HOM05D000388 ORTHO05D004227 6.2e-10 67.8 36 86.1
CAN.G386.17 Capsicum annuum HOM05D000388 ORTHO05D004888 8.1e-10 67.4 44 68.2
SMO086G0046 Selaginella moellendorffii HOM05D000388 ORTHO05D004227 1.1e-09 67.0 65 55.4
Lsat_1_v5_gn_2_5581 Lactuca sativa HOM05D000388 ORTHO05D004227 1.4e-09 66.6 44 72.7
Solyc00g500058.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 6.8e-09 64.3 35 82.9
Solyc00g500210.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 6.8e-09 64.3 35 82.9
HanXRQChr02g0044971 Helianthus annuus HOM05D000388 ORTHO05D004227 1.2e-08 63.5 34 85.3
HanXRQChr07g0201031 Helianthus annuus HOM05D000388 ORTHO05D004227 1.2e-08 63.5 34 85.3
HanXRQChr10g0289191 Helianthus annuus HOM05D000388 ORTHO05D004227 1.2e-08 63.5 34 85.3
BolSC47t61106H Brassica oleracea HOM05D000388 ORTHO05D004227 2.6e-08 62.4 37 78.4
BolSC47t61117H Brassica oleracea HOM05D000388 ORTHO05D004227 2.6e-08 62.4 37 78.4
BolSC49t61191H Brassica oleracea HOM05D000388 ORTHO05D004227 2.6e-08 62.4 37 78.4
BraSC151t45709Z Brassica rapa HOM05D000388 ORTHO05D004227 2.6e-08 62.4 37 78.4
LjContig00489g0010648 Lotus japonicus HOM05D000388 ORTHO05D004227 4.4e-08 61.6 35 80.0
BolC9t56934H Brassica oleracea HOM05D000388 ORTHO05D004227 1.3e-07 60.1 37 75.7
Mapoly0085s0066 Marchantia polymorpha HOM05D000388 ORTHO05D004227 1.7e-07 59.7 36 72.2
SalBow1G5459 Salvia bowleyana HOM05D000388 ORTHO05D000473 2.2e-07 59.3 34 76.5
Solyc09g015280.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 3.7e-07 58.5 38 71.1
Sopen10g014220 Solanum pennellii HOM05D000388 ORTHO05D004227 4.9e-07 58.2 32 84.4
HanXRQChr02g0041451 Helianthus annuus HOM05D000388 ORTHO05D004227 8.3e-07 57.4 29 89.7
Oeu009352.1 Olea europaea HOM05D003066 ORTHO05D004162 8.3e-07 57.4 51 60.8
BolSC29t60579H Brassica oleracea HOM05D000388 ORTHO05D004227 1.1e-06 57.0 35 74.3
CDE05G2709 Ceratophyllum demersum HOM05D000210 ORTHO05D000247 1.9e-06 56.2 28 92.9
VMungo1127G1446 Vigna mungo HOM05D000388 ORTHO05D000473 3.2e-06 55.5 33 69.7
Sed0007112 Sechium edule HOM05D000388 ORTHO05D004227 9.2e-06 53.9 29 86.2


User provided reference genes

Program Settings