Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12457 Sequoiadendron giganteum HOM05D005467 ORTHO05D006523 2.0e-158 562.4 284 100.0
arahy.Tifrunner.gnm1.ann1.U1J3BU Arachis hypogaea HOM05D005467 ORTHO05D006523 1.4e-87 327.0 253 62.8
CSS0047900 Camellia sinensis var. sinensis HOM05D005467 ORTHO05D006523 1.2e-86 323.9 233 67.8
MD16G1031500 Malus domestica HOM05D005467 ORTHO05D006523 1.2e-86 323.9 268 61.6
Sed0008724 Sechium edule HOM05D005467 ORTHO05D006523 2.0e-86 323.2 224 71.4
CiPaw.05G246600 Carya illinoinensis HOM05D005467 ORTHO05D006523 2.7e-86 322.8 262 62.6
QL01p002615 Quercus lobata HOM05D005467 ORTHO05D006523 3.5e-86 322.4 256 62.5
MELO3C012295.2 Cucumis melo HOM05D005467 ORTHO05D006523 1.0e-85 320.9 248 65.7
VMungo0720G1946 Vigna mungo HOM05D005467 ORTHO05D006523 1.0e-85 320.9 259 60.6
Gohir.A04G099200 Gossypium hirsutum HOM05D005467 ORTHO05D006523 2.3e-85 319.7 257 61.5
vmacro10622 Vaccinium macrocarpon HOM05D005467 ORTHO05D006523 2.3e-85 319.7 229 68.6
Gohir.D04G138632 Gossypium hirsutum HOM05D005467 ORTHO05D006523 5.0e-85 318.5 257 61.1
Rhsim09G0101300 Rhododendron simsii HOM05D005467 ORTHO05D006523 5.0e-85 318.5 247 64.0
Thecc.02G211500 Theobroma cacao HOM05D005467 ORTHO05D006523 8.6e-85 317.8 257 61.1
CsaV3_5G034840 Cucumis sativus L. HOM05D005467 ORTHO05D006523 1.1e-84 317.4 246 65.0
Manes.06G062500 Manihot esculenta HOM05D005467 ORTHO05D006523 1.1e-84 317.4 261 61.7
RcHm_v2.0_Chr4g0433781 Rosa chinensis HOM05D005467 ORTHO05D006523 1.1e-84 317.4 249 63.5
Cfa008565 Carpinus fangiana HOM05D005467 ORTHO05D006523 1.5e-84 317.0 254 61.8
Gorai.012G123600 Gossypium raimondii HOM05D005467 ORTHO05D006523 1.5e-84 317.0 257 60.7
Phvul.007G035400 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 1.5e-84 317.0 259 60.2
FAN12G3855 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.9e-84 316.6 234 65.4
Eucgr.G02222 Eucalyptus grandis HOM05D005467 ORTHO05D006523 3.3e-84 315.8 248 62.9
FvH4_4g26200 Fragaria vesca HOM05D005467 ORTHO05D006523 5.6e-84 315.1 245 63.3
PGR119G0286 Punica granatum HOM05D005467 ORTHO05D006523 9.5e-84 314.3 252 61.9
FAN12G1869 Fragaria x ananassa HOM05D005467 ORTHO05D006523 1.2e-83 313.9 245 63.3
Nn3g18021 Nelumbo nucifera HOM05D005467 ORTHO05D006523 1.2e-83 313.9 262 60.3
TAR629G1677 Trochodendron aralioides HOM05D005467 ORTHO05D006523 1.2e-83 313.9 269 58.7
SMO172G0164 Selaginella moellendorffii HOM05D005467 ORTHO05D006523 1.6e-83 313.5 213 69.5
Ciclev10015390m.g Citrus clementina HOM05D005467 ORTHO05D006523 2.8e-83 312.8 254 59.4
Glyma.20G124100 Glycine max HOM05D005467 ORTHO05D006523 4.7e-83 312.0 255 60.0
Migut.L00653 Erythranthe guttata HOM05D005467 ORTHO05D006523 6.2e-83 311.6 265 61.1
Glyma.10G266400 Glycine max HOM05D005467 ORTHO05D006523 8.1e-83 311.2 259 58.7
Actinidia14942 Actinidia chinensis HOM05D005467 ORTHO05D006523 1.1e-82 310.8 257 62.3
arahy.Tifrunner.gnm1.ann1.F0PHAM Arachis hypogaea HOM05D005467 ORTHO05D006523 1.1e-82 310.8 275 57.1
Migut.L00826 Erythranthe guttata HOM05D005467 ORTHO05D006523 1.1e-82 310.8 265 61.1
Medtr1g108650 Medicago truncatula HOM05D005467 ORTHO05D006523 1.1e-82 310.8 245 61.2
Dinv05879 Davidia involucrata HOM05D005467 ORTHO05D006523 2.3e-82 309.7 252 61.9
FAN07G0694 Fragaria x ananassa HOM05D005467 ORTHO05D006523 2.3e-82 309.7 245 62.4
HanXRQChr15g0477671 Helianthus annuus HOM05D005467 ORTHO05D006523 2.3e-82 309.7 223 65.9
Potri.010G116200 Populus trichocarpa HOM05D005467 ORTHO05D006523 2.3e-82 309.7 264 59.1
Pp3c22_2590 Physcomitrium patens HOM05D005467 ORTHO05D006523 5.2e-82 308.5 234 63.7
CANSAT01G3134 Cannabis sativa HOM05D005467 ORTHO05D006523 6.8e-82 308.1 260 61.2
PSO063G5439 Papaver somniferum HOM05D005467 ORTHO05D006523 6.8e-82 308.1 244 62.7
Lj6C750G3 Lonicera japonica HOM05D005467 ORTHO05D006523 1.5e-81 307.0 234 63.7
Os01g0506200 Oryza sativa ssp. japonica HOM05D005467 ORTHO05D006523 1.5e-81 307.0 223 65.0
Lalb_Chr21g0308561 Lupinus albus HOM05D005467 ORTHO05D006523 2.0e-81 306.6 256 59.8
GSVIVG01011792001 Vitis vinifera HOM05D005467 ORTHO05D006523 2.0e-81 306.6 251 60.2
ECA246G2902 Erigeron canadensis HOM05D005467 ORTHO05D006523 2.6e-81 306.2 249 59.8
Lj5g0001822 Lotus japonicus HOM05D005467 ORTHO05D006523 2.6e-81 306.2 252 60.3
PSO782G0553 Papaver somniferum HOM05D005467 ORTHO05D006523 2.6e-81 306.2 220 66.8
Sc04g0005780 Simmondsia chinensis HOM05D005467 ORTHO05D006523 2.6e-81 306.2 224 65.6
TPR.G4835 Trifolium pratense HOM05D005467 ORTHO05D006523 5.8e-81 305.1 261 57.5
Atru.chr11.358 Acer truncatum HOM05D005467 ORTHO05D006523 7.5e-81 304.7 260 58.8
Peaxi162Scf00205g00928 Petunia axillaris HOM05D005467 ORTHO05D006523 1.3e-80 303.9 224 65.6
Psat6g222960 Pisum sativum HOM05D005467 ORTHO05D006523 2.2e-80 303.1 262 56.5
Nitab4.5_0000350g0200 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.9e-80 302.8 248 61.7
MSTRG.879 Avicennia marina HOM05D005467 ORTHO05D006523 8.3e-80 301.2 260 58.5
TWI31G0476 Tripterygium wilfordii HOM05D005467 ORTHO05D006523 8.3e-80 301.2 260 58.1
Aqoxy3G00153 Aquilegia oxysepala HOM05D005467 ORTHO05D006523 1.9e-79 300.1 268 57.1
Ca_11108_v3 Cicer arietinum L. HOM05D005467 ORTHO05D006523 9.2e-79 297.7 261 57.5
Hma1.2p1_0114F.1_g055340 Hydrangea macrophylla HOM05D005467 ORTHO05D006523 2.1e-78 296.6 267 57.3
Nitab4.5_0004524g0030 Nicotiana tabacum HOM05D005467 ORTHO05D006523 2.1e-78 296.6 248 60.9
Oeu064202.3 Olea europaea HOM05D005467 ORTHO05D006523 2.7e-78 296.2 259 58.3
Sabra10G0087600 Salix brachista HOM05D005467 ORTHO05D006523 6.0e-78 295.0 280 55.4
Sabra10G0086000 Salix brachista HOM05D005467 ORTHO05D006523 1.3e-77 293.9 284 54.6
CAN.G1489.4 Capsicum annuum HOM05D005467 ORTHO05D006523 6.6e-77 291.6 244 59.8
Sopen05g004250 Solanum pennellii HOM05D005467 ORTHO05D006523 5.2e-74 282.0 248 58.1
CDE06G2222 Ceratophyllum demersum HOM05D005467 ORTHO05D006523 2.6e-73 279.6 246 56.5
ClCG05G022280 Citrullus lanatus HOM05D005467 ORTHO05D006523 4.4e-73 278.9 323 50.5
Solyc05g008420.4 Solanum lycopersicum HOM05D005467 ORTHO05D006523 5.8e-73 278.5 248 57.7
AagrBONN_evm.TU.Sc2ySwM_344.4352 Anthoceros agrestis HOM05D005467 ORTHO05D006523 1.3e-72 277.3 221 60.6
AUR62014129 Chenopodium quinoa HOM05D005467 ORTHO05D006523 4.9e-72 275.4 253 55.7
ATR0041G011 Amborella trichopoda HOM05D005467 ORTHO05D006523 2.4e-71 273.1 260 53.8
MBI10_g46301_MAGBIO Magnolia biondii HOM05D005467 ORTHO05D006523 2.7e-70 269.6 204 65.2
Prupe.1G321400 Prunus persica HOM05D005467 ORTHO05D006523 2.7e-70 269.6 201 66.7
Ah.02g128100 Amaranthus hybridus HOM05D005467 ORTHO05D006523 4.6e-70 268.9 244 54.9
DCAR_007277 Daucus carota HOM05D005467 ORTHO05D006523 7.8e-70 268.1 231 57.6
TAR622G1271 Trochodendron aralioides HOM05D005467 ORTHO05D006523 2.5e-68 263.1 176 72.2
Hund24998 Selenicereus undatus HOM05D005467 ORTHO05D006523 5.6e-68 261.9 238 55.9
Dinv04888 Davidia involucrata HOM05D005467 ORTHO05D006523 6.8e-66 255.0 187 66.3
Duzib248G1088 Durio zibethinus HOM05D005467 ORTHO05D006523 7.6e-65 251.5 259 52.9
SGA_v2.0_scaffold50G18532 Striga asiatica HOM05D005467 ORTHO05D006523 5.4e-63 245.4 254 50.4
Cpa.g.sc65.104 Carica papaya HOM05D005467 ORTHO05D006523 6.4e-56 221.9 224 51.8
Nitab4.5_0000293g0010 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.3e-51 207.6 233 45.1
CBR_g17592 Chara braunii HOM05D005467 ORTHO05D006523 8.1e-51 204.9 209 51.2
unitig_21.g20024 Utricularia gibba HOM05D000903 ORTHO05D000731 6.9e-50 201.8 259 45.6
AUR62039552 Chenopodium quinoa HOM05D005467 ORTHO05D006523 2.6e-49 199.9 257 45.5
Cc11_g09120 Coffea canephora HOM05D005467 ORTHO05D006523 4.5e-49 199.1 150 66.0
Haze_11049 Corylus avellana HOM05D005467 ORTHO05D006523 7.6e-49 198.4 166 60.2
Nitab4.5_0000350g0270 Nicotiana tabacum HOM05D005467 ORTHO05D006523 7.6e-49 198.4 219 46.6
Peaxi162Scf00159g00824 Petunia axillaris HOM05D005467 ORTHO05D006523 5.3e-42 175.6 227 44.9
Sopen02g012020 Solanum pennellii HOM05D005467 ORTHO05D006523 5.7e-36 155.6 253 35.6
Peaxi162Scf00159g00823 Petunia axillaris HOM05D005467 ORTHO05D006523 1.2e-33 147.9 239 35.1
Sopen02g012000 Solanum pennellii HOM05D005467 ORTHO05D006523 5.9e-33 145.6 259 32.8
PRCOL_00002109 Prasinoderma coloniale HOM05D005467 ORTHO05D006523 2.2e-32 143.7 207 38.2
MCO12G173 Micromonas commoda HOM05D005467 ORTHO05D006523 1.4e-31 141.0 192 41.7
Sopen02g012010 Solanum pennellii HOM05D005467 ORTHO05D006523 3.2e-31 139.8 225 36.0
PGSC0003DMG400017873 Solanum tuberosum HOM05D005467 ORTHO05D006523 2.7e-30 136.7 256 32.4
Gohir.D04G138566 Gossypium hirsutum HOM05D005467 ORTHO05D006523 3.9e-29 132.9 120 55.8
Nitab4.5_0019054g0020 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.3e-27 127.9 168 43.5
Lsat_1_v5_gn_3_54101 Lactuca sativa HOM05D005467 ORTHO05D006523 2.8e-27 126.7 87 67.8
Zm00001eb341680 Zea mays HOM05D005467 ORTHO05D006523 5.3e-26 122.5 91 61.5
Sed0021963 Sechium edule HOM05D005467 ORTHO05D006523 1.2e-25 121.3 250 35.2
Nitab4.5_0002820g0070 Nicotiana tabacum HOM05D005467 ORTHO05D006523 1.5e-25 120.9 148 45.9
Haze_11050 Corylus avellana HOM05D005467 ORTHO05D006523 1.7e-24 117.5 79 68.4
Solyc02g038660.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 2.2e-24 117.1 248 32.3
HPP92_008650 Vanilla planifolia HOM05D005467 ORTHO05D006523 8.5e-24 115.2 115 53.9
Cc11_g09130 Coffea canephora HOM05D005467 ORTHO05D006523 2.5e-23 113.6 119 48.7
Lsat_1_v5_gn_3_86380 Lactuca sativa HOM05D005467 ORTHO05D006523 9.4e-23 111.7 217 32.7
Solyc02g038680.1 Solanum lycopersicum HOM05D005467 ORTHO05D006523 9.4e-23 111.7 250 30.4
Phvul.008G137000 Phaseolus vulgaris HOM05D005467 ORTHO05D006523 1.7e-19 100.9 55 81.8
Lsat_1_v5_gn_3_107041 Lactuca sativa HOM05D005467 ORTHO05D006523 3.7e-19 99.8 172 38.4
Solyc02g038670.3 Solanum lycopersicum HOM05D005467 ORTHO05D006523 1.1e-15 88.2 156 38.5
PGSC0003DMG400038827 Solanum tuberosum HOM05D005467 ORTHO05D006523 1.2e-14 84.7 105 37.1
Peaxi162Scf00205g00812 Petunia axillaris HOM05D005467 ORTHO05D006523 4.7e-14 82.8 103 40.8
Lsat_1_v5_gn_4_96160 Lactuca sativa HOM05D005467 ORTHO05D006523 2.0e-09 67.4 47 63.8
Lsat_1_v5_gn_7_58700 Lactuca sativa HOM05D005467 ORTHO05D006523 2.0e-09 67.4 47 63.8
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 4.2e-07 59.7 60 50.0


User provided reference genes

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