Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12448 Sequoiadendron giganteum HOM05D001343 ORTHO05D007223 0.0e+00 1626.7 1079 100.0
Mapoly0179s0009 Marchantia polymorpha HOM05D001343 ORTHO05D007223 3.8e-133 480.3 1166 33.7
ATR0661G538 Amborella trichopoda HOM05D001343 ORTHO05D007223 5.5e-124 449.9 752 48.3
Dinv08526 Davidia involucrata HOM05D001343 ORTHO05D007223 4.7e-115 420.2 778 41.4
Actinidia17384 Actinidia chinensis HOM05D001343 ORTHO05D007223 1.3e-109 402.1 771 42.2
Duzib187G0329 Durio zibethinus HOM05D001343 ORTHO05D007223 8.5e-109 399.4 769 42.5
CANSAT25G1453 Cannabis sativa HOM05D001343 ORTHO05D007223 1.8e-106 391.7 749 43.8
CANSAT25G0854 Cannabis sativa HOM05D001343 ORTHO05D007223 8.8e-106 389.4 749 43.7
MD15G1233300 Malus domestica HOM05D001343 ORTHO05D007223 1.8e-103 381.7 751 40.1
Hma1.2p1_0300F.1_g118160 Hydrangea macrophylla HOM05D001343 ORTHO05D007223 4.1e-103 380.6 799 39.5
Aqoxy5G01035 Aquilegia oxysepala HOM05D001343 ORTHO05D007223 9.1e-103 379.4 780 39.5
Lalb_Chr05g0211921 Lupinus albus HOM05D001343 ORTHO05D007223 2.7e-102 377.9 763 42.5
Dinv40173 Davidia involucrata HOM05D001343 ORTHO05D007223 4.5e-102 377.1 508 46.3
QL06p052741 Quercus lobata HOM05D001343 ORTHO05D007223 5.0e-101 373.6 808 40.2
SGA_v2.0_scaffold12G05990 Striga asiatica HOM05D001343 ORTHO05D007223 2.5e-100 371.3 785 40.1
Sed0023593 Sechium edule HOM05D001343 ORTHO05D007223 3.3e-100 370.9 768 43.8
TAR381G1734 Trochodendron aralioides HOM05D001343 ORTHO05D007223 5.5e-100 370.2 755 41.1
CsaV3_3G000380 Cucumis sativus L. HOM05D001343 ORTHO05D007223 9.5e-100 369.4 769 43.3
Duzib147G0638 Durio zibethinus HOM05D001343 ORTHO05D007223 1.2e-99 369.0 772 42.4
Atru.chr3.956 Acer truncatum HOM05D001343 ORTHO05D007223 6.1e-99 366.7 773 40.6
Prupe.7G179600 Prunus persica HOM05D001343 ORTHO05D007223 6.1e-99 366.7 764 42.8
TWI09G1271 Tripterygium wilfordii HOM05D001343 ORTHO05D007223 1.0e-98 365.9 790 41.4
PSO210G1702 Papaver somniferum HOM05D001343 ORTHO05D007223 2.3e-98 364.8 777 39.1
Hund03615 Selenicereus undatus HOM05D001343 ORTHO05D007223 3.0e-98 364.4 750 40.7
GSVIVG01003839001 Vitis vinifera HOM05D001343 ORTHO05D007223 1.2e-97 362.5 744 40.7
ClCG10G000340 Citrullus lanatus HOM05D001343 ORTHO05D007223 1.5e-97 362.1 778 42.8
Phvul.002G114800 Phaseolus vulgaris HOM05D001343 ORTHO05D007223 4.1e-95 354.0 772 39.1
PGR083G0487 Punica granatum HOM05D001343 ORTHO05D007223 1.7e-93 348.6 754 44.6
MSTRG.15594 Avicennia marina HOM05D001343 ORTHO05D007223 2.3e-93 348.2 798 44.2
FAN23G1852 Fragaria x ananassa HOM05D001343 ORTHO05D007223 5.0e-93 347.1 759 42.8
Gohir.A10G099100 Gossypium hirsutum HOM05D001343 ORTHO05D007223 5.0e-93 347.1 766 42.4
CiPaw.07G004100 Carya illinoinensis HOM05D001343 ORTHO05D007223 1.9e-92 345.1 774 41.1
AT5G66030 Arabidopsis thaliana HOM05D001343 ORTHO05D007223 4.7e-91 340.5 769 40.1
THA.LOC104826465 Tarenaya hassleriana HOM05D001343 ORTHO05D007223 3.1e-90 337.8 765 40.8
HanXRQChr14g0442391 Helianthus annuus HOM05D001343 ORTHO05D007223 4.4e-89 334.0 758 39.4
Haze_03675 Corylus avellana HOM05D001343 ORTHO05D007223 5.8e-89 333.6 835 37.6
CSS0043948 Camellia sinensis var. sinensis HOM05D001343 ORTHO05D007223 2.2e-88 331.6 774 43.9
PSO170G3735 Papaver somniferum HOM05D001343 ORTHO05D007223 2.2e-88 331.6 749 39.1
BcaB04g20130 Brassica carinata HOM05D001343 ORTHO05D002008 2.9e-88 331.3 734 41.3
Thecc.01G007100 Theobroma cacao HOM05D001343 ORTHO05D007223 3.7e-88 330.9 784 41.6
TPR.G25095 Trifolium pratense HOM05D001343 ORTHO05D007223 4.9e-88 330.5 770 40.6
SalBow5G5069 Salvia bowleyana HOM05D001343 ORTHO05D007223 1.9e-87 328.6 698 45.4
FvH4_1g10521 Fragaria vesca HOM05D001343 ORTHO05D007223 7.0e-87 326.6 759 41.1
EL10Ac6g15468 Beta vulgaris HOM05D001343 ORTHO05D007223 7.8e-86 323.2 770 39.1
Thhalv10003686m.g Eutrema salsugineum HOM05D001343 ORTHO05D007223 1.7e-85 322.0 511 41.9
MD02G1119300 Malus domestica HOM05D001343 ORTHO05D007223 3.9e-85 320.9 751 38.2
FAN28G2189 Fragaria x ananassa HOM05D001343 ORTHO05D007223 6.6e-85 320.1 759 40.4
vmacro20524 Vaccinium macrocarpon HOM05D001343 ORTHO05D007223 8.6e-85 319.7 739 39.4
Zm00001eb104860 Zea mays HOM05D001343 ORTHO05D007223 1.1e-84 319.3 763 36.3
Potri.005G099800 Populus trichocarpa HOM05D001343 ORTHO05D007223 2.5e-84 318.2 771 37.9
Nn5g30956 Nelumbo nucifera HOM05D001343 ORTHO05D007223 3.3e-84 317.8 711 40.5
Sabra05G0082500 Salix brachista HOM05D001343 ORTHO05D007223 4.3e-84 317.4 771 37.9
CAN.G890.76 Capsicum annuum HOM05D001343 ORTHO05D007223 2.1e-83 315.1 773 39.8
Os07g0472500 Oryza sativa ssp. japonica HOM05D001343 ORTHO05D007223 2.1e-83 315.1 449 44.8
Gohir.D10G089000 Gossypium hirsutum HOM05D001343 ORTHO05D007223 8.1e-83 313.2 766 40.6
FAN19G1061 Fragaria x ananassa HOM05D001343 ORTHO05D007223 1.1e-82 312.8 759 40.4
Cpa.g.sc55.186 Carica papaya HOM05D001343 ORTHO05D007223 4.0e-82 310.8 768 37.4
Gorai.011G097900 Gossypium raimondii HOM05D001343 ORTHO05D007223 4.0e-82 310.8 766 40.5
HPP92_003502 Vanilla planifolia HOM05D001343 ORTHO05D007223 8.9e-82 309.7 763 42.6
AagrBONN_evm.TU.Sc2ySwM_344.163 Anthoceros agrestis HOM05D001343 ORTHO05D007223 5.8e-81 307.0 674 36.4
Manes.02G112700 Manihot esculenta HOM05D001343 ORTHO05D007223 7.5e-81 306.6 794 39.9
Nitab4.5_0000702g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 1.7e-80 305.4 782 34.1
Carub.0008s2848 Capsella rubella HOM05D001343 ORTHO05D007223 2.9e-80 304.7 789 36.0
QL06p053829 Quercus lobata HOM05D001343 ORTHO05D007223 6.4e-80 303.5 791 38.4
COL.COLO4_22537 Corchorus olitorius HOM05D001343 ORTHO05D007223 5.4e-79 300.4 507 41.6
arahy.Tifrunner.gnm1.ann1.AU9Y8G Arachis hypogaea HOM05D001343 ORTHO05D007223 2.1e-78 298.5 789 42.7
arahy.Tifrunner.gnm1.ann1.SLQH96 Arachis hypogaea HOM05D001343 ORTHO05D007223 2.1e-78 298.5 789 42.7
ECA238G2213 Erigeron canadensis HOM05D001343 ORTHO05D007223 2.1e-78 298.5 761 35.5
Migut.L00734 Erythranthe guttata HOM05D001343 ORTHO05D007223 1.0e-77 296.2 450 42.7
AL8G45590 Arabidopsis lyrata HOM05D001343 ORTHO05D007223 1.7e-77 295.4 782 38.2
Manes.01G153700 Manihot esculenta HOM05D001343 ORTHO05D007223 1.7e-77 295.4 586 49.0
MELO3C013733.2 Cucumis melo HOM05D001343 ORTHO05D007223 6.6e-77 293.5 776 39.4
Ah.03g148390 Amaranthus hybridus HOM05D001343 ORTHO05D007223 1.1e-76 292.7 750 38.9
Ciclev10024922m.g Citrus clementina HOM05D001343 ORTHO05D007223 1.1e-76 292.7 774 35.1
A09p10220 Brassica napus HOM05D001343 ORTHO05D002008 2.5e-76 291.6 744 38.6
BolC9t54101H Brassica oleracea HOM05D001343 ORTHO05D002008 5.6e-76 290.4 756 38.4
AUR62029449 Chenopodium quinoa HOM05D001343 ORTHO05D007223 5.6e-76 290.4 761 37.6
Nitab4.5_0002967g0060 Nicotiana tabacum HOM05D001343 ORTHO05D007223 5.6e-76 290.4 508 40.0
BcaC04g23105 Brassica carinata HOM05D001343 ORTHO05D002008 7.3e-76 290.0 749 39.1
C09p12110 Brassica napus HOM05D001343 ORTHO05D002008 7.3e-76 290.0 749 39.1
AUR62003379 Chenopodium quinoa HOM05D001343 ORTHO05D007223 9.5e-76 289.7 753 39.2
Glyma.01G159900 Glycine max HOM05D001343 ORTHO05D007223 9.5e-76 289.7 770 37.1
BraA09t36667Z Brassica rapa HOM05D001343 ORTHO05D002008 1.6e-75 288.9 753 38.2
Peaxi162Scf01446g00025 Petunia axillaris HOM05D001343 ORTHO05D007223 1.6e-75 288.9 765 34.2
Solyc02g082840.3 Solanum lycopersicum HOM05D001343 ORTHO05D007223 4.7e-75 287.3 773 40.9
Medtr5g023770 Medicago truncatula HOM05D001343 ORTHO05D007223 6.2e-75 287.0 771 40.2
VMungo1215G1031 Vigna mungo HOM05D001343 ORTHO05D007223 6.2e-75 287.0 781 42.1
Lj2g0004784 Lotus japonicus HOM05D001343 ORTHO05D007223 5.2e-74 283.9 777 38.5
Actinidia22910 Actinidia chinensis HOM05D001343 ORTHO05D007223 6.8e-74 283.5 755 39.9
Sp2g30660 Schrenkiella parvula HOM05D001343 ORTHO05D007223 6.8e-74 283.5 513 39.8
Pp3c20_18210 Physcomitrium patens HOM05D001343 ORTHO05D007223 3.4e-73 281.2 723 31.3
Atru.chr3.968 Acer truncatum HOM05D001343 ORTHO05D007223 2.9e-72 278.1 771 35.8
Sopen02g027640 Solanum pennellii HOM05D001343 ORTHO05D007223 6.4e-72 276.9 773 39.7
Sc16g0001690 Simmondsia chinensis HOM05D001343 ORTHO05D007223 4.1e-71 274.2 747 38.3
Lsat_1_v5_gn_2_74420 Lactuca sativa HOM05D001343 ORTHO05D007223 7.1e-71 273.5 759 39.5
CARHR281730 Cardamine hirsuta HOM05D001343 ORTHO05D007223 9.2e-71 273.1 316 52.2
Cc07_g11650 Coffea canephora HOM05D001343 ORTHO05D007223 1.5e-68 265.8 508 45.3
unitig_88.g27773 Utricularia gibba HOM05D001343 ORTHO05D007223 4.3e-68 264.2 762 32.9
Eucgr.J02528 Eucalyptus grandis HOM05D001343 ORTHO05D007223 8.1e-67 260.0 759 41.9
CDE06G1375 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 7.6e-65 253.4 275 52.7
Glyma.11G084200 Glycine max HOM05D001343 ORTHO05D007223 1.7e-64 252.3 780 37.2
Ca_24963_v3 Cicer arietinum L. HOM05D001343 ORTHO05D007223 2.9e-64 251.5 797 37.4
CDE07G1064 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 6.0e-62 243.8 255 54.5
Lj4A232G45 Lonicera japonica HOM05D001343 ORTHO05D007223 6.0e-62 243.8 405 42.0
Pp3c23_9770 Physcomitrium patens HOM05D001343 ORTHO05D007223 2.3e-61 241.9 776 34.1
CBR_g34809 Chara braunii HOM05D000019 ORTHO05D000002 3.3e-52 211.5 367 40.6
RcHm_v2.0_Chr2g0097451 Rosa chinensis HOM05D001343 ORTHO05D007223 9.6e-52 209.9 193 64.2
Psat2g150480 Pisum sativum HOM05D001343 ORTHO05D007223 5.3e-50 204.1 202 56.9
DCAR_011583 Daucus carota HOM05D001343 ORTHO05D007223 4.9e-48 197.6 451 35.3
Migut.L00811 Erythranthe guttata HOM05D001343 ORTHO05D007223 3.3e-36 158.3 136 65.4
QL06p053793 Quercus lobata HOM05D001343 ORTHO05D007223 5.3e-34 151.0 141 66.7
Rhsim10G0198000 Rhododendron simsii HOM05D001343 ORTHO05D007223 2.6e-33 148.7 227 47.6
RcHm_v2.0_Chr2g0097571 Rosa chinensis HOM05D001343 ORTHO05D007223 4.8e-27 127.9 123 61.0
arahy.Tifrunner.gnm1.ann1.9PSP05 Arachis hypogaea HOM05D001343 ORTHO05D007223 2.1e-22 112.5 166 49.4
arahy.Tifrunner.gnm1.ann1.ISY8LN Arachis hypogaea HOM05D001343 ORTHO05D007223 2.8e-19 102.1 176 40.3
arahy.Tifrunner.gnm1.ann1.6P6C0I Arachis hypogaea HOM05D001343 ORTHO05D007223 3.1e-18 98.6 95 64.2
RcHm_v2.0_Chr2g0097461 Rosa chinensis HOM05D001343 ORTHO05D007223 4.1e-18 98.2 540 34.3
Psat2g150520 Pisum sativum HOM05D001343 ORTHO05D007223 2.2e-16 92.4 360 41.9
arahy.Tifrunner.gnm1.ann1.T78FCF Arachis hypogaea HOM05D001343 ORTHO05D007223 4.2e-15 88.2 76 61.8
QL06p052753 Quercus lobata HOM05D003687 ORTHO05D007223 2.1e-14 85.9 54 77.8
RcHm_v2.0_Chr2g0097581 Rosa chinensis HOM05D001343 ORTHO05D007223 3.6e-14 85.1 540 35.2
HPP92_003508 Vanilla planifolia HOM05D001343 ORTHO05D007223 9.7e-12 77.0 56 69.6
CDE07G1287 Ceratophyllum demersum HOM05D001343 ORTHO05D007223 8.2e-11 73.9 214 35.5
Cre09.g398808 Chlamydomonas reinhardtii HOM05D001343 ORTHO05D007223 5.3e-10 71.2 96 42.7
Actinidia26548 Actinidia chinensis HOM05D001343 ORTHO05D007223 2.2e-08 65.9 176 29.0
Lsat_1_v5_gn_4_84780 Lactuca sativa HOM05D003172 ORTHO05D007223 8.0e-06 57.4 52 61.5


User provided reference genes

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