Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12405 Sequoiadendron giganteum HOM05D018424 ORTHO05D010051 1.7e-108 396.0 189 100.0
SEGI_07159 Sequoiadendron giganteum HOM05D018424 ORTHO05D383985 7.1e-35 151.4 190 43.2
SEGI_26515 Sequoiadendron giganteum HOM05D018424 ORTHO05D385050 7.1e-35 151.4 190 43.2
SEGI_12747 Sequoiadendron giganteum HOM05D018424 ORTHO05D002447 2.6e-29 132.9 133 45.9
SEGI_40906 Sequoiadendron giganteum HOM05D018424 ORTHO05D002447 2.6e-29 132.9 150 44.7
SEGI_18751 Sequoiadendron giganteum HOM05D018424 ORTHO05D010051 2.6e-21 106.3 142 42.3
SEGI_22870 Sequoiadendron giganteum HOM05D018424 ORTHO05D010051 9.3e-19 97.8 146 39.0
MBI14_g16339_MAGBIO Magnolia biondii HOM05D008034 ORTHO05D010051 1.0e-12 77.8 145 29.7
Rhsim13G0089800 Rhododendron simsii HOM05D001089 ORTHO05D000920 3.8e-12 75.9 147 27.9
SEGI_07630 Sequoiadendron giganteum HOM05D008034 ORTHO05D010051 4.9e-12 75.5 161 31.1
Ciclev10029356m.g Citrus clementina HOM05D008034 ORTHO05D010051 6.5e-12 75.1 143 26.6
Manes.11G137800 Manihot esculenta HOM05D008034 ORTHO05D010051 1.9e-11 73.6 163 27.0
AUR62009660 Chenopodium quinoa HOM05D008034 ORTHO05D010051 2.5e-11 73.2 140 28.6
RhsimUnG0139800 Rhododendron simsii HOM05D001089 ORTHO05D000920 3.2e-11 72.8 147 27.2
Atru.chr3.3772 Acer truncatum HOM05D008034 ORTHO05D010051 7.1e-11 71.6 143 25.2
Aqoxy4G03114 Aquilegia oxysepala HOM05D008034 ORTHO05D010051 7.1e-11 71.6 150 26.7
GSVIVG01025076001 Vitis vinifera HOM05D008034 ORTHO05D010051 1.2e-10 70.9 153 27.5
Duzib170G0117 Durio zibethinus HOM05D008034 ORTHO05D010051 2.1e-10 70.1 164 26.8
Gohir.D07G098700 Gossypium hirsutum HOM05D008034 ORTHO05D010051 3.5e-10 69.3 161 26.1
Gorai.001G106200 Gossypium raimondii HOM05D008034 ORTHO05D010051 3.5e-10 69.3 161 26.1
Medtr7g060450 Medicago truncatula HOM05D008034 ORTHO05D010051 3.5e-10 69.3 156 25.0
SEGI_17058 Sequoiadendron giganteum HOM05D001120 ORTHO05D002447 3.5e-10 69.3 129 31.8
TWI75G0515 Tripterygium wilfordii HOM05D008034 ORTHO05D010051 3.5e-10 69.3 165 26.1
Ah.15g096410 Amaranthus hybridus HOM05D008034 ORTHO05D010051 4.6e-10 68.9 139 27.3
FAN10G0756 Fragaria x ananassa HOM05D001787 ORTHO05D007379 6.1e-10 68.6 139 29.5
Psat3g140960 Pisum sativum HOM05D008034 ORTHO05D010051 6.1e-10 68.6 142 26.8
Thecc.09G333100 Theobroma cacao HOM05D008034 ORTHO05D010051 6.1e-10 68.6 164 27.4
FAN03G1672 Fragaria x ananassa HOM05D001787 ORTHO05D007379 7.9e-10 68.2 139 29.5
FAN06G2736 Fragaria x ananassa HOM05D001787 ORTHO05D007379 7.9e-10 68.2 139 29.5
RcHm_v2.0_Chr1g0364691 Rosa chinensis HOM05D008034 ORTHO05D010051 7.9e-10 68.2 169 27.8
TAR623G1523 Trochodendron aralioides HOM05D008034 ORTHO05D010051 7.9e-10 68.2 143 26.6
arahy.Tifrunner.gnm1.ann1.JRZ5DE Arachis hypogaea HOM05D008034 ORTHO05D010051 1.3e-09 67.4 130 27.7
FvH4_7g20661 Fragaria vesca HOM05D008034 ORTHO05D010051 1.3e-09 67.4 141 29.1
FAN06G3907 Fragaria x ananassa HOM05D001787 ORTHO05D007379 1.3e-09 67.4 141 29.1
COL.COLO4_18407 Corchorus olitorius HOM05D008034 ORTHO05D010051 1.8e-09 67.0 168 24.4
Gohir.A07G094200 Gossypium hirsutum HOM05D008034 ORTHO05D010051 1.8e-09 67.0 161 26.1
Hma1.2p1_0018F.1_g012390 Hydrangea macrophylla HOM05D001120 ORTHO05D002447 1.8e-09 67.0 127 31.5
Lalb_Chr22g0350901 Lupinus albus HOM05D001120 ORTHO05D002447 3.0e-09 66.2 137 30.7
SEGI_26238 Sequoiadendron giganteum HOM05D008034 ORTHO05D010051 3.0e-09 66.2 173 28.9
SEGI_39089 Sequoiadendron giganteum HOM05D008034 ORTHO05D010051 3.0e-09 66.2 173 28.9
ATR0594G086 Amborella trichopoda HOM05D008034 ORTHO05D010051 3.9e-09 65.9 148 27.0
Nitab4.5_0007786g0020 Nicotiana tabacum HOM05D008034 ORTHO05D010051 3.9e-09 65.9 153 25.5
FvH4_3g34350 Fragaria vesca HOM05D008034 ORTHO05D010051 5.1e-09 65.5 158 27.2
QL01p035245 Quercus lobata HOM05D008034 ORTHO05D010051 5.1e-09 65.5 157 27.4
CAN.G84.9 Capsicum annuum HOM05D008034 ORTHO05D010051 6.7e-09 65.1 147 24.5
Lalb_Chr03g0035081 Lupinus albus HOM05D008034 ORTHO05D010051 6.7e-09 65.1 142 25.4
Nitab4.5_0002380g0020 Nicotiana tabacum HOM05D008034 ORTHO05D010051 6.7e-09 65.1 147 25.2
FAN11G2200 Fragaria x ananassa HOM05D008034 ORTHO05D010051 8.7e-09 64.7 185 25.4
Hma1.2p1_0035F.1_g021690 Hydrangea macrophylla HOM05D008034 ORTHO05D010051 8.7e-09 64.7 138 25.4
EL10Ac7g15930 Beta vulgaris HOM05D008034 ORTHO05D010051 1.1e-08 64.3 137 28.5
CsaV3_4G001510 Cucumis sativus L. HOM05D001120 ORTHO05D002447 1.1e-08 64.3 125 29.6
Lalb_Chr03g0042121 Lupinus albus HOM05D008034 ORTHO05D010051 1.1e-08 64.3 142 26.1
Medtr8g090315 Medicago truncatula HOM05D001623 ORTHO05D001473 1.1e-08 64.3 180 26.7
arahy.Tifrunner.gnm1.ann1.YB7TH1 Arachis hypogaea HOM05D008034 ORTHO05D010051 1.5e-08 63.9 130 26.2
Nn2g10579 Nelumbo nucifera HOM05D001120 ORTHO05D010051 1.5e-08 63.9 174 27.6
Aqoxy7G02184 Aquilegia oxysepala HOM05D001120 ORTHO05D002447 1.9e-08 63.5 119 30.3
Phvul.002G254900 Phaseolus vulgaris HOM05D001623 ORTHO05D001473 1.9e-08 63.5 177 26.6
Eucgr.B02437 Eucalyptus grandis HOM05D008034 ORTHO05D010051 2.5e-08 63.2 140 25.7
Nn2g10576 Nelumbo nucifera HOM05D008034 ORTHO05D010051 2.5e-08 63.2 173 26.6
Prupe.6G089000 Prunus persica HOM05D008034 ORTHO05D010051 3.3e-08 62.8 161 25.5
Ah.03g143370 Amaranthus hybridus HOM05D001623 ORTHO05D001473 4.3e-08 62.4 154 30.5
Cfa011409 Carpinus fangiana HOM05D008034 ORTHO05D010051 4.3e-08 62.4 159 23.9
Lalb_Chr07g0185121 Lupinus albus HOM05D001623 ORTHO05D001473 4.3e-08 62.4 185 28.1
SEGI_22646 Sequoiadendron giganteum HOM05D001623 ORTHO05D001473 4.3e-08 62.4 141 30.5
SEGI_39204 Sequoiadendron giganteum HOM05D001623 ORTHO05D001473 4.3e-08 62.4 141 30.5
Phvul.008G100300 Phaseolus vulgaris HOM05D008034 ORTHO05D010051 5.7e-08 62.0 138 24.6
Glyma.18G177500 Glycine max HOM05D008034 ORTHO05D010051 9.7e-08 61.2 138 23.9
Sc21g0005330 Simmondsia chinensis HOM05D008034 ORTHO05D010051 9.7e-08 61.2 78 33.3
CSS0025126 Camellia sinensis var. sinensis HOM05D008034 ORTHO05D010051 1.3e-07 60.8 138 24.6
Glyma.05G179300 Glycine max HOM05D001623 ORTHO05D001473 1.3e-07 60.8 176 26.1
Glyma.08G137000 Glycine max HOM05D001623 ORTHO05D001473 1.3e-07 60.8 152 27.0
Medtr3g087510 Medicago truncatula HOM05D001623 ORTHO05D001473 1.6e-07 60.5 143 28.0
Haze_23982 Corylus avellana HOM05D008034 ORTHO05D010051 2.2e-07 60.1 137 24.8
Peaxi162Scf00148g00114 Petunia axillaris HOM05D001120 ORTHO05D002447 2.2e-07 60.1 121 32.2
Ca_17730_v3 Cicer arietinum L. HOM05D001623 ORTHO05D001473 2.8e-07 59.7 192 27.1
Solyc11g072765.1 Solanum lycopersicum HOM05D008034 ORTHO05D010051 3.7e-07 59.3 149 22.1
Lalb_Chr12g0203781 Lupinus albus HOM05D001623 ORTHO05D001473 4.8e-07 58.9 136 26.5
SGA_v2.0_scaffold54G19491 Striga asiatica HOM05D001623 ORTHO05D001473 4.8e-07 58.9 164 28.0
CiPaw.13G103300 Carya illinoinensis HOM05D008034 ORTHO05D010051 6.3e-07 58.5 137 24.8
Migut.H02367 Erythranthe guttata HOM05D001623 ORTHO05D001473 6.3e-07 58.5 142 28.2
Hund13636 Selenicereus undatus HOM05D001623 ORTHO05D001473 6.3e-07 58.5 150 28.0
VMungo1383G3175 Vigna mungo HOM05D008034 ORTHO05D010051 6.3e-07 58.5 97 27.8
AUR62003780 Chenopodium quinoa HOM05D001623 ORTHO05D001473 8.2e-07 58.2 149 29.5
VMungo0251G1170 Vigna mungo HOM05D001623 ORTHO05D001473 1.1e-06 57.8 189 27.0
Lalb_Chr08g0231141 Lupinus albus HOM05D001623 ORTHO05D001473 1.4e-06 57.4 157 25.5
Lalb_Chr13g0296011 Lupinus albus HOM05D001623 ORTHO05D001473 1.8e-06 57.0 152 27.6
Medtr4g036345 Medicago truncatula HOM05D001623 ORTHO05D001473 1.8e-06 57.0 143 29.4
SalBow5G1073 Salvia bowleyana HOM05D001623 ORTHO05D001473 1.8e-06 57.0 103 33.0
SalBow5G5269 Salvia bowleyana HOM05D001623 ORTHO05D001473 1.8e-06 57.0 103 33.0
MELO3C032900.2 Cucumis melo HOM05D001623 ORTHO05D001473 2.4e-06 56.6 126 32.5
CsaV3_6G045550 Cucumis sativus L. HOM05D001623 ORTHO05D001473 2.4e-06 56.6 138 30.4
Psat7g053840 Pisum sativum HOM05D001623 ORTHO05D001473 2.4e-06 56.6 118 28.0
arahy.Tifrunner.gnm1.ann1.9D9T18 Arachis hypogaea HOM05D001623 ORTHO05D001473 3.1e-06 56.2 176 25.0
Psat5g089400 Pisum sativum HOM05D001623 ORTHO05D001473 3.1e-06 56.2 118 29.7
Ah.03g143410 Amaranthus hybridus HOM05D001623 ORTHO05D001473 4.1e-06 55.8 160 24.4
Lj6g0013317 Lotus japonicus HOM05D001623 ORTHO05D001473 4.1e-06 55.8 173 26.0
Peaxi162Scf00478g00045 Petunia axillaris HOM05D001623 ORTHO05D001473 4.1e-06 55.8 99 33.3
Migut.L00110 Erythranthe guttata HOM05D001623 ORTHO05D001473 5.3e-06 55.5 125 28.0
Oeu056594.1 Olea europaea HOM05D001623 ORTHO05D001473 5.3e-06 55.5 140 27.9
Dinv06338 Davidia involucrata HOM05D008034 ORTHO05D010051 6.9e-06 55.1 84 32.1
SalBow3G3252 Salvia bowleyana HOM05D001623 ORTHO05D001473 6.9e-06 55.1 126 30.2
Actinidia27676 Actinidia chinensis HOM05D008034 ORTHO05D010051 9.0e-06 54.7 165 21.8
arahy.Tifrunner.gnm1.ann1.U8ESB5 Arachis hypogaea HOM05D001623 ORTHO05D001473 9.0e-06 54.7 176 24.4
MSTRG.23336 Avicennia marina HOM05D001623 ORTHO05D001473 9.0e-06 54.7 112 30.4
Sopen04g024830 Solanum pennellii HOM05D001623 ORTHO05D001473 9.0e-06 54.7 145 28.3


User provided reference genes

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