Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 2.1e-92 342.4 185 100.0
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 1.5e-21 107.1 133 48.9
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.5e-21 107.1 152 44.7
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 5.7e-21 105.1 151 42.4
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 7.5e-21 104.8 112 50.9
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 9.7e-21 104.4 153 43.8
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 3.7e-20 102.4 157 43.3
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 3.7e-20 102.4 128 47.7
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 8.2e-20 101.3 166 39.8
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 8.2e-20 101.3 149 43.6
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 8.2e-20 101.3 128 45.3
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 1.4e-19 100.5 134 42.5
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.4e-19 100.5 159 40.9
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 2.4e-19 99.8 155 39.4
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 4.1e-19 99.0 128 46.1
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 4.1e-19 99.0 159 40.3
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 7.0e-19 98.2 155 40.0
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 9.1e-19 97.8 138 42.8
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 9.1e-19 97.8 158 38.6
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.2e-18 97.4 134 42.5
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 1.6e-18 97.1 125 44.0
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.6e-18 97.1 132 43.9
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 1.6e-18 97.1 150 38.7
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 2.0e-18 96.7 147 41.5
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 2.0e-18 96.7 126 42.9
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 2.7e-18 96.3 129 42.6
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 3.5e-18 95.9 125 44.8
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 4.5e-18 95.5 135 42.2
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 4.5e-18 95.5 155 40.6
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 5.9e-18 95.1 128 42.2
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 7.7e-18 94.7 128 44.5
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 7.7e-18 94.7 109 45.9
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 7.7e-18 94.7 126 42.9
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 7.7e-18 94.7 128 43.0
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 7.7e-18 94.7 156 40.4
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 1.0e-17 94.4 160 41.9
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 1.0e-17 94.4 136 41.2
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.3e-17 94.0 142 38.7
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 2.2e-17 93.2 133 40.6
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 2.2e-17 93.2 111 45.0
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 2.2e-17 93.2 132 41.7
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 2.9e-17 92.8 123 43.1
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 2.9e-17 92.8 128 42.2
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 2.9e-17 92.8 159 39.6
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 2.9e-17 92.8 131 42.0
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 3.8e-17 92.4 125 43.2
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.8e-17 92.4 111 45.0
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.8e-17 92.4 111 45.0
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 3.8e-17 92.4 153 38.6
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 5.0e-17 92.0 134 42.5
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 5.0e-17 92.0 126 42.9
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 5.0e-17 92.0 126 42.9
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 8.5e-17 91.3 150 39.3
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.1e-16 90.9 111 44.1
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.1e-16 90.9 133 42.1
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.1e-16 90.9 110 41.8
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 1.5e-16 90.5 110 42.7
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 1.5e-16 90.5 110 41.8
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 1.5e-16 90.5 103 44.7
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.9e-16 90.1 147 40.1
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 1.9e-16 90.1 148 37.8
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 2.5e-16 89.7 111 40.5
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.5e-16 89.7 134 41.0
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 2.5e-16 89.7 134 41.0
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 2.5e-16 89.7 110 41.8
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 3.2e-16 89.4 128 40.6
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 3.2e-16 89.4 125 44.8
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 5.5e-16 88.6 176 35.8
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 7.2e-16 88.2 123 40.7
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 9.4e-16 87.8 125 40.8
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 9.4e-16 87.8 133 40.6
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.2e-15 87.4 121 43.0
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 1.2e-15 87.4 144 35.4
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.2e-15 87.4 110 40.9
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 1.6e-15 87.0 158 38.0
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.6e-15 87.0 111 42.3
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 2.1e-15 86.7 159 36.5
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 2.1e-15 86.7 114 41.2
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 2.1e-15 86.7 125 40.0
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.1e-15 86.7 133 40.6
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 2.7e-15 86.3 134 35.8
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 3.6e-15 85.9 133 40.6
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 4.7e-15 85.5 158 37.3
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 4.7e-15 85.5 158 37.3
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 4.7e-15 85.5 158 37.3
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 4.7e-15 85.5 121 39.7
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 6.1e-15 85.1 158 36.7
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 6.1e-15 85.1 179 35.8
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 8.0e-15 84.7 111 42.3
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 1.0e-14 84.3 150 34.7
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 1.0e-14 84.3 122 41.0
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.4e-14 84.0 133 39.8
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 1.4e-14 84.0 134 36.6
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.8e-14 83.6 147 37.4
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 2.3e-14 83.2 121 43.0
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 3.0e-14 82.8 171 36.8
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 3.0e-14 82.8 171 36.8
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 3.0e-14 82.8 156 34.6
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 3.0e-14 82.8 134 37.3
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 3.0e-14 82.8 143 39.2
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 4.0e-14 82.4 132 38.6
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 4.0e-14 82.4 134 37.3
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 5.2e-14 82.0 147 36.7
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 6.8e-14 81.6 163 33.7
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 6.8e-14 81.6 153 35.3
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 2.0e-13 80.1 128 36.7
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 2.0e-13 80.1 176 34.7
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 3.4e-13 79.3 110 38.2
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 7.5e-13 78.2 133 36.1
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.7e-12 77.0 111 39.6
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 2.8e-12 76.3 110 38.2
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.7e-12 75.9 142 34.5
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 2.4e-11 73.2 157 31.8
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 4.5e-10 68.9 190 32.1
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 5.9e-10 68.6 130 39.2
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 1.3e-09 67.4 76 48.7
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 2.5e-08 63.2 68 48.5
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 5.5e-08 62.0 125 36.8
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 7.2e-08 61.6 85 44.7


User provided reference genes

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