Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12229 Sequoiadendron giganteum HOM05D004269 ORTHO05D007106 2.5e-119 432.2 224 100.0
MBI14_g24308_MAGBIO Magnolia biondii HOM05D004269 ORTHO05D007106 7.1e-34 148.3 104 75.0
Sc20g0004610 Simmondsia chinensis HOM05D004269 ORTHO05D007106 1.3e-32 144.1 124 62.1
Sed0027746 Sechium edule HOM05D004269 ORTHO05D007106 1.8e-32 143.7 118 61.9
QL09p012946 Quercus lobata HOM05D004269 ORTHO05D007106 2.3e-32 143.3 104 72.1
CANSAT56G4185 Cannabis sativa HOM05D004269 ORTHO05D007106 5.1e-32 142.1 99 74.7
Haze_20743 Corylus avellana HOM05D004269 ORTHO05D007106 5.1e-32 142.1 104 72.1
GSVIVG01025529001 Vitis vinifera HOM05D004269 ORTHO05D007106 5.1e-32 142.1 104 71.2
TAR369G0704 Trochodendron aralioides HOM05D004269 ORTHO05D007106 8.7e-32 141.4 118 63.6
Thecc.05G044300 Theobroma cacao HOM05D004269 ORTHO05D007106 1.5e-31 140.6 99 70.7
ClCG10G020940 Citrullus lanatus HOM05D004269 ORTHO05D007106 1.9e-31 140.2 118 61.0
Nn2g10437 Nelumbo nucifera HOM05D004269 ORTHO05D007106 2.5e-31 139.8 104 72.1
Hund02377 Selenicereus undatus HOM05D004269 ORTHO05D007106 2.5e-31 139.8 158 52.5
ATR0559G147 Amborella trichopoda HOM05D004269 ORTHO05D007106 4.3e-31 139.0 104 70.2
Aqoxy2G02034 Aquilegia oxysepala HOM05D004269 ORTHO05D007106 4.3e-31 139.0 118 63.6
CsaV3_3G035070 Cucumis sativus L. HOM05D004269 ORTHO05D007106 4.3e-31 139.0 118 59.3
CSS0004421 Camellia sinensis var. sinensis HOM05D004269 ORTHO05D007106 5.6e-31 138.7 99 72.7
Rhsim04G0153900 Rhododendron simsii HOM05D004269 ORTHO05D007106 5.6e-31 138.7 104 69.2
SMO347G0094 Selaginella moellendorffii HOM05D004269 ORTHO05D007106 7.4e-31 138.3 123 62.6
arahy.Tifrunner.gnm1.ann1.5YT5MY Arachis hypogaea HOM05D004269 ORTHO05D007106 9.6e-31 137.9 134 59.0
AUR62036580 Chenopodium quinoa HOM05D004269 ORTHO05D007106 9.6e-31 137.9 104 68.3
Dinv37204 Davidia involucrata HOM05D004269 ORTHO05D007106 1.3e-30 137.5 104 70.2
Lj2C99G10 Lonicera japonica HOM05D004269 ORTHO05D007106 1.6e-30 137.1 104 69.2
Mapoly0082s0028 Marchantia polymorpha HOM05D004269 ORTHO05D007106 1.6e-30 137.1 121 62.0
Nitab4.5_0009149g0030 Nicotiana tabacum HOM05D004269 ORTHO05D007106 1.6e-30 137.1 124 62.1
Cfa017428 Carpinus fangiana HOM05D004269 ORTHO05D007106 2.1e-30 136.7 104 70.2
ECA238G4253 Erigeron canadensis HOM05D004269 ORTHO05D007106 2.1e-30 136.7 124 61.3
arahy.Tifrunner.gnm1.ann1.FJP50F Arachis hypogaea HOM05D004269 ORTHO05D007106 2.8e-30 136.3 134 58.2
CAN.G97.19 Capsicum annuum HOM05D004269 ORTHO05D007106 2.8e-30 136.3 124 61.3
AUR62031166 Chenopodium quinoa HOM05D004269 ORTHO05D007106 2.8e-30 136.3 104 67.3
Cc06_g02960 Coffea canephora HOM05D004269 ORTHO05D007106 2.8e-30 136.3 124 60.5
MELO3C009277.2 Cucumis melo HOM05D004269 ORTHO05D007106 2.8e-30 136.3 118 58.5
Nitab4.5_0002077g0090 Nicotiana tabacum HOM05D004269 ORTHO05D007106 2.8e-30 136.3 124 61.3
Peaxi162Scf00039g01234 Petunia axillaris HOM05D004269 ORTHO05D007106 2.8e-30 136.3 124 60.5
TAR623G0301 Trochodendron aralioides HOM05D004269 ORTHO05D007106 2.8e-30 136.3 104 68.3
TAR623G0331 Trochodendron aralioides HOM05D004269 ORTHO05D007106 2.8e-30 136.3 104 68.3
Os03g0279400 Oryza sativa ssp. japonica HOM05D004269 ORTHO05D007106 3.7e-30 136.0 99 72.7
HanXRQChr14g0453741 Helianthus annuus HOM05D004269 ORTHO05D007106 4.8e-30 135.6 124 58.9
DCAR_009253 Daucus carota HOM05D004269 ORTHO05D007106 6.2e-30 135.2 113 62.8
PGSC0003DMG400008852 Solanum tuberosum HOM05D004269 ORTHO05D007106 6.2e-30 135.2 124 61.3
vmacro08669 Vaccinium macrocarpon HOM05D004269 ORTHO05D007106 6.2e-30 135.2 158 53.2
EL10Ac7g17097 Beta vulgaris HOM05D004269 ORTHO05D007106 8.1e-30 134.8 124 60.5
EL10Ac8g18791 Beta vulgaris HOM05D004269 ORTHO05D007106 8.1e-30 134.8 166 49.4
Ciclev10011653m.g Citrus clementina HOM05D004269 ORTHO05D007106 8.1e-30 134.8 99 71.7
Sopen09g005160 Solanum pennellii HOM05D004269 ORTHO05D007106 8.1e-30 134.8 124 61.3
Atru.chr8.1955 Acer truncatum HOM05D004269 ORTHO05D007106 1.4e-29 134.0 104 66.3
arahy.Tifrunner.gnm1.ann1.L55DKK Arachis hypogaea HOM05D004269 ORTHO05D007106 1.4e-29 134.0 124 59.7
Dinv35635 Davidia involucrata HOM05D004269 ORTHO05D007106 1.4e-29 134.0 104 67.3
Manes.09G086800 Manihot esculenta HOM05D004269 ORTHO05D007106 1.4e-29 134.0 161 48.4
Solyc09g010420.4 Solanum lycopersicum HOM05D004269 ORTHO05D007106 1.4e-29 134.0 124 60.5
Lsat_1_v5_gn_2_110500 Lactuca sativa HOM05D004269 ORTHO05D007106 2.4e-29 133.3 124 58.9
MD04G1121900 Malus domestica HOM05D004269 ORTHO05D007106 2.4e-29 133.3 124 59.7
Gohir.D09G153600 Gossypium hirsutum HOM05D004269 ORTHO05D007106 3.1e-29 132.9 99 66.7
HPP92_001489 Vanilla planifolia HOM05D004269 ORTHO05D007106 3.1e-29 132.9 98 67.3
Gorai.006G175100 Gossypium raimondii HOM05D004269 ORTHO05D007106 4.0e-29 132.5 99 65.7
PSO339G5566 Papaver somniferum HOM05D004269 ORTHO05D007106 4.0e-29 132.5 104 66.3
Lj5g0017615 Lotus japonicus HOM05D004269 ORTHO05D007106 5.3e-29 132.1 147 51.0
QL05p010548 Quercus lobata HOM05D004269 ORTHO05D007106 5.3e-29 132.1 99 71.7
RcHm_v2.0_Chr3g0467271 Rosa chinensis HOM05D004269 ORTHO05D007106 5.3e-29 132.1 104 67.3
BcaB02g09282 Brassica carinata HOM05D004269 ORTHO05D007106 6.9e-29 131.7 103 66.0
Migut.J00361 Erythranthe guttata HOM05D004269 ORTHO05D007106 6.9e-29 131.7 124 59.7
Lalb_Chr06g0171031 Lupinus albus HOM05D004269 ORTHO05D007106 6.9e-29 131.7 127 55.1
Prupe.6G250400 Prunus persica HOM05D004269 ORTHO05D007106 6.9e-29 131.7 99 69.7
Hma1.2p1_1535F.1_g289500 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 9.0e-29 131.3 104 67.3
PSO206G0015 Papaver somniferum HOM05D004269 ORTHO05D007106 9.0e-29 131.3 124 58.9
SalBow3G0454 Salvia bowleyana HOM05D004269 ORTHO05D007106 9.0e-29 131.3 124 58.9
TWI74G1158 Tripterygium wilfordii HOM05D004269 ORTHO05D007106 9.0e-29 131.3 104 65.4
BcaC02g11857 Brassica carinata HOM05D004269 ORTHO05D007106 1.2e-28 131.0 103 65.0
C04p10550 Brassica napus HOM05D004269 ORTHO05D007106 1.2e-28 131.0 103 65.0
BolC4t22646H Brassica oleracea HOM05D004269 ORTHO05D007106 1.2e-28 131.0 103 65.0
Cpa.g.sc11.168 Carica papaya HOM05D004269 ORTHO05D007106 1.2e-28 131.0 104 67.3
FAN14G0717 Fragaria x ananassa HOM05D004269 ORTHO05D007106 1.2e-28 131.0 104 67.3
MD12G1138500 Malus domestica HOM05D004269 ORTHO05D007106 1.2e-28 131.0 99 68.7
Psat6g067760 Pisum sativum HOM05D004269 ORTHO05D007106 1.2e-28 131.0 127 56.7
C04p65960 Brassica napus HOM05D004269 ORTHO05D007106 1.5e-28 130.6 103 65.0
FvH4_6g14300 Fragaria vesca HOM05D004269 ORTHO05D007106 1.5e-28 130.6 104 67.3
QL07p047335 Quercus lobata HOM05D004269 ORTHO05D007106 1.5e-28 130.6 99 71.7
A04p28640 Brassica napus HOM05D004269 ORTHO05D007106 2.0e-28 130.2 103 65.0
A05p08460 Brassica napus HOM05D004269 ORTHO05D007106 2.0e-28 130.2 103 65.0
BolC4t28100H Brassica oleracea HOM05D004269 ORTHO05D007106 2.0e-28 130.2 103 65.0
Glyma.10G044300 Glycine max HOM05D004269 ORTHO05D007106 2.0e-28 130.2 127 56.7
Glyma.13G131900 Glycine max HOM05D004269 ORTHO05D007106 2.0e-28 130.2 127 56.7
Gohir.A09G158200 Gossypium hirsutum HOM05D004269 ORTHO05D007106 2.0e-28 130.2 99 64.6
VMungo0720G1352 Vigna mungo HOM05D004269 ORTHO05D007106 2.0e-28 130.2 127 55.9
BcaB06g28999 Brassica carinata HOM05D004269 ORTHO05D007106 2.6e-28 129.8 103 65.0
BraA04t18341Z Brassica rapa HOM05D004269 ORTHO05D007106 2.6e-28 129.8 103 64.1
CDE05G0081 Ceratophyllum demersum HOM05D004269 ORTHO05D007106 2.6e-28 129.8 113 61.9
Ca_09614_v3 Cicer arietinum L. HOM05D004269 ORTHO05D007106 2.6e-28 129.8 147 51.7
BraA05t19815Z Brassica rapa HOM05D004269 ORTHO05D007106 3.4e-28 129.4 103 65.0
Sp4g19820 Schrenkiella parvula HOM05D004269 ORTHO05D007106 3.4e-28 129.4 103 64.1
Actinidia13128 Actinidia chinensis HOM05D004269 ORTHO05D007106 4.5e-28 129.0 104 65.4
Pp3c9_2270 Physcomitrium patens HOM05D004269 ORTHO05D007106 4.5e-28 129.0 102 67.6
CARHR132110 Cardamine hirsuta HOM05D004269 ORTHO05D007106 5.8e-28 128.6 103 64.1
CiPaw.09G188900 Carya illinoinensis HOM05D004269 ORTHO05D007106 5.8e-28 128.6 104 64.4
Potri.012G115900 Populus trichocarpa HOM05D004269 ORTHO05D007106 5.8e-28 128.6 99 69.7
PGR044G1633 Punica granatum HOM05D004269 ORTHO05D007106 5.8e-28 128.6 124 56.5
Aa31LG5G19670 Aethionema arabicum HOM05D004269 ORTHO05D007106 7.6e-28 128.3 97 68.0
MSTRG.19100 Avicennia marina HOM05D004269 ORTHO05D007106 1.0e-27 127.9 124 57.3
Eucgr.K03158 Eucalyptus grandis HOM05D004269 ORTHO05D007106 1.0e-27 127.9 124 56.5
Medtr1g068845 Medicago truncatula HOM05D004269 ORTHO05D007106 1.3e-27 127.5 147 51.0
Phvul.007G158000 Phaseolus vulgaris HOM05D004269 ORTHO05D007106 1.7e-27 127.1 127 52.8
Thhalv10016608m.g Eutrema salsugineum HOM05D004269 ORTHO05D007106 2.9e-27 126.3 103 63.1
Sabra12G0084000 Salix brachista HOM05D004269 ORTHO05D007106 2.9e-27 126.3 115 60.9
AL4G33990 Arabidopsis lyrata HOM05D004269 ORTHO05D007106 3.8e-27 125.9 103 65.0
AT2G37500 Arabidopsis thaliana HOM05D004269 ORTHO05D007106 3.8e-27 125.9 103 65.0
Carub.0004s1942 Capsella rubella HOM05D004269 ORTHO05D007106 3.8e-27 125.9 103 64.1
FAN02G4217 Fragaria x ananassa HOM05D004269 ORTHO05D007106 3.8e-27 125.9 104 65.4
TPR.G11806 Trifolium pratense HOM05D004269 ORTHO05D007106 8.4e-27 124.8 147 50.3
AagrBONN_evm.TU.Sc2ySwM_228.5429 Anthoceros agrestis HOM05D004269 ORTHO05D007106 1.9e-26 123.6 93 72.0
THA.LOC104815237 Tarenaya hassleriana HOM05D004269 ORTHO05D007106 2.5e-26 123.2 99 66.7
SGA_v2.0_scaffold75G24934 Striga asiatica HOM05D004269 ORTHO05D007106 1.2e-25 120.9 222 37.4
SEGI_09032 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.3e-23 112.5 77 72.7
Duzib128G0641 Durio zibethinus HOM05D004269 ORTHO05D007106 1.1e-21 107.8 99 56.6
SEGI_15034 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.1e-21 107.8 77 70.1
Hma1.2p1_1004F.1_g246850 Hydrangea macrophylla HOM05D004269 ORTHO05D007106 3.4e-20 102.8 109 55.0
Cre16.g694850 Chlamydomonas reinhardtii HOM05D004269 ORTHO05D007106 5.9e-20 102.1 95 54.7
Actinidia05298 Actinidia chinensis HOM05D004269 ORTHO05D007106 7.6e-20 101.7 104 55.8
unitig_578.g15701 Utricularia gibba HOM05D004269 ORTHO05D007106 2.2e-19 100.1 84 59.5
SEGI_01053 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.6e-17 94.0 72 63.9
PRCOL_00001324 Prasinoderma coloniale HOM05D004269 ORTHO05D007106 2.7e-17 93.2 99 54.5
SEGI_15286 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.6e-17 92.4 91 54.9
MCO14G482 Micromonas commoda HOM05D004269 ORTHO05D007106 1.9e-15 87.0 99 50.5
Zm00001eb012670 Zea mays HOM05D004269 ORTHO05D007106 1.8e-13 80.5 63 68.3
SHI29092 Sapria himalayana HOM05D004269 ORTHO05D007106 1.1e-10 71.2 103 46.6
COL.COLO4_35964 Corchorus olitorius HOM05D001211 ORTHO05D001084 5.1e-08 62.4 91 42.9
SEGI_01202 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.1e-08 62.4 79 44.3
SEGI_02055 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.7e-08 62.0 79 44.3
SEGI_37560 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.1e-07 61.2 127 34.6
SEGI_06759 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.5e-07 60.8 79 44.3
SEGI_14552 Sequoiadendron giganteum HOM05D001780 ORTHO05D004373 1.5e-07 60.8 67 49.3
SEGI_40078 Sequoiadendron giganteum HOM05D003637 ORTHO05D004175 2.6e-07 60.1 79 41.8
SEGI_32525 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 4.4e-07 59.3 79 41.8
SEGI_02520 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.3e-06 57.8 79 39.2
SEGI_05729 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.3e-06 57.8 79 39.2
SEGI_28317 Sequoiadendron giganteum HOM05D004541 ORTHO05D006163 1.3e-06 57.8 79 39.2
SEGI_01828 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.8e-06 56.6 78 39.7
Hma1.2p1_0661F.1_g197850 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.3e-06 55.5 65 43.1
Rhsim04G0118200 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.3e-06 55.5 64 42.2


User provided reference genes

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