Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12216 Sequoiadendron giganteum HOM05D006884 ORTHO05D008604 0.0e+00 1387.5 716 100.0
TAR369G0310 Trochodendron aralioides HOM05D006884 ORTHO05D008604 3.2e-197 692.6 708 54.4
ATR0759G051 Amborella trichopoda HOM05D006884 ORTHO05D008604 6.1e-196 688.3 702 56.0
Prupe.6G097500 Prunus persica HOM05D006884 ORTHO05D008604 1.1e-192 677.6 714 54.1
CANSAT54G0393 Cannabis sativa HOM05D006884 ORTHO05D008604 1.8e-192 676.8 716 54.6
GSVIVG01025156001 Vitis vinifera HOM05D006884 ORTHO05D008604 1.2e-191 674.1 714 54.1
COL.COLO4_05186 Corchorus olitorius HOM05D006884 ORTHO05D008604 1.6e-191 673.7 714 53.1
Duzib168G2304 Durio zibethinus HOM05D006884 ORTHO05D008604 4.5e-191 672.2 714 53.2
Aqoxy4G03234 Aquilegia oxysepala HOM05D006884 ORTHO05D008604 3.8e-190 669.1 709 53.6
Cfa011353 Carpinus fangiana HOM05D006884 ORTHO05D008604 5.5e-189 665.2 716 53.2
Hma1.2p1_0071F.1_g038150 Hydrangea macrophylla HOM05D006884 ORTHO05D008604 2.1e-188 663.3 713 52.7
QL01p023227 Quercus lobata HOM05D006884 ORTHO05D008604 4.7e-188 662.1 713 52.3
CiPaw.13G108400 Carya illinoinensis HOM05D006884 ORTHO05D008604 5.2e-187 658.7 717 52.4
Actinidia07119 Actinidia chinensis HOM05D006884 ORTHO05D008604 8.8e-187 657.9 717 53.7
Gorai.013G255800 Gossypium raimondii HOM05D006884 ORTHO05D008604 1.2e-186 657.5 711 52.2
Atru.chr3.3680 Acer truncatum HOM05D006884 ORTHO05D008604 2.0e-186 656.8 710 52.5
CSS0004159 Camellia sinensis var. sinensis HOM05D006884 ORTHO05D008604 2.6e-186 656.4 714 52.2
vmacro03180 Vaccinium macrocarpon HOM05D006884 ORTHO05D008604 1.7e-185 653.7 718 53.9
Gohir.A13G221000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 2.8e-185 652.9 713 51.8
Gohir.D13G225000 Gossypium hirsutum HOM05D006884 ORTHO05D008604 4.9e-185 652.1 711 51.9
PSO063G0254 Papaver somniferum HOM05D006884 ORTHO05D008604 1.1e-184 651.0 712 52.7
Manes.04G024400 Manihot esculenta HOM05D006884 ORTHO05D008604 4.1e-184 649.0 710 53.0
arahy.Tifrunner.gnm1.ann1.AY6ICH Arachis hypogaea HOM05D006884 ORTHO05D008604 4.5e-183 645.6 704 51.6
Haze_23897 Corylus avellana HOM05D006884 ORTHO05D008604 3.8e-182 642.5 760 50.1
Ciclev10027944m.g Citrus clementina HOM05D006884 ORTHO05D008604 6.6e-182 641.7 700 51.1
Eucgr.J00944 Eucalyptus grandis HOM05D006884 ORTHO05D008604 1.5e-181 640.6 719 51.6
Solyc11g069170.2 Solanum lycopersicum HOM05D006884 ORTHO05D008604 4.3e-181 639.0 712 52.0
ClCG03G002300 Citrullus lanatus HOM05D006884 ORTHO05D008604 1.2e-180 637.5 700 51.1
Lj2C1032T7 Lonicera japonica HOM05D006884 ORTHO05D008604 4.7e-180 635.6 733 51.6
Sopen11g027910 Solanum pennellii HOM05D006884 ORTHO05D008604 4.7e-180 635.6 713 51.8
TWI38G0581 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 1.5e-178 630.6 714 50.1
MELO3C005036.2 Cucumis melo HOM05D006884 ORTHO05D008604 2.6e-178 629.8 711 50.5
DCAR_018827 Daucus carota HOM05D006884 ORTHO05D008604 3.4e-178 629.4 707 50.9
Lalb_Chr01g0004191 Lupinus albus HOM05D006884 ORTHO05D008604 4.4e-178 629.0 713 50.1
Psat7g223440 Pisum sativum HOM05D006884 ORTHO05D008604 1.8e-176 623.6 713 51.5
MBI14_g07928_MAGBIO Magnolia biondii HOM05D006884 ORTHO05D008604 2.4e-176 623.2 626 55.9
Medtr4g060500 Medicago truncatula HOM05D006884 ORTHO05D008604 2.4e-176 623.2 720 49.9
TPR.G15554 Trifolium pratense HOM05D006884 ORTHO05D008604 3.5e-175 619.4 718 51.3
Lj3g0026527 Lotus japonicus HOM05D006884 ORTHO05D008604 1.3e-174 617.5 711 50.9
MSTRG.12324 Avicennia marina HOM05D006884 ORTHO05D008604 2.3e-174 616.7 704 50.6
Cc01_g11430 Coffea canephora HOM05D006884 ORTHO05D008604 2.3e-174 616.7 702 50.4
RcHm_v2.0_Chr5g0060051 Rosa chinensis HOM05D006884 ORTHO05D008604 3.9e-174 615.9 718 50.6
PSO339G1719 Papaver somniferum HOM05D006884 ORTHO05D008604 5.0e-174 615.5 628 55.1
TWI38G2405 Tripterygium wilfordii HOM05D006884 ORTHO05D008604 8.6e-174 614.8 712 49.9
PGSC0003DMG400008066 Solanum tuberosum HOM05D006884 ORTHO05D008604 1.1e-173 614.4 750 48.7
Potri.009G014900 Populus trichocarpa HOM05D006884 ORTHO05D008604 1.9e-173 613.6 713 50.9
PGR119G0543 Punica granatum HOM05D006884 ORTHO05D008604 2.5e-173 613.2 712 49.4
Thecc.09G259000 Theobroma cacao HOM05D006884 ORTHO05D008604 5.6e-173 612.1 494 63.0
Oeu005901.1 Olea europaea HOM05D006884 ORTHO05D008604 9.5e-173 611.3 729 50.9
VMungo1127G0767 Vigna mungo HOM05D006884 ORTHO05D008604 9.5e-173 611.3 705 50.9
FvH4_3g32920 Fragaria vesca HOM05D006884 ORTHO05D008604 1.6e-172 610.5 714 50.3
Cpa.g.sc139.78 Carica papaya HOM05D006884 ORTHO05D008604 2.1e-172 610.1 634 54.7
Peaxi162Scf00351g00322 Petunia axillaris HOM05D006884 ORTHO05D008604 1.8e-171 607.1 716 49.6
FAN11G3181 Fragaria x ananassa HOM05D006884 ORTHO05D008604 3.1e-171 606.3 714 50.1
Phvul.011G073400 Phaseolus vulgaris HOM05D006884 ORTHO05D008604 1.2e-170 604.4 714 50.0
Glyma.11G154214 Glycine max HOM05D006884 ORTHO05D008604 6.4e-169 598.6 708 48.3
FAN25G2544 Fragaria x ananassa HOM05D006884 ORTHO05D008604 1.4e-168 597.4 719 49.1
Migut.N02612 Erythranthe guttata HOM05D006884 ORTHO05D008604 2.4e-168 596.7 703 49.4
arahy.Tifrunner.gnm1.ann1.H1W27A Arachis hypogaea HOM05D006884 ORTHO05D008604 4.1e-168 595.9 566 56.4
THA.LOC104815748 Tarenaya hassleriana HOM05D006884 ORTHO05D008604 1.6e-167 594.0 712 48.5
Mapoly0043s0112 Marchantia polymorpha HOM05D006884 ORTHO05D008604 2.7e-167 593.2 728 49.6
Sed0010984 Sechium edule HOM05D006884 ORTHO05D008604 1.7e-166 590.5 704 49.1
A06p05030 Brassica napus HOM05D006884 ORTHO05D008604 6.6e-166 588.6 710 49.3
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 6.6e-166 588.6 711 48.5
HanXRQChr07g0197411 Helianthus annuus HOM05D006884 ORTHO05D008604 8.6e-166 588.2 705 50.5
Nitab4.5_0000999g0100 Nicotiana tabacum HOM05D006884 ORTHO05D008604 8.6e-166 588.2 755 46.8
C05p05970 Brassica napus HOM05D006884 ORTHO05D008604 1.1e-165 587.8 711 48.5
BraA06t23709Z Brassica rapa HOM05D006884 ORTHO05D008604 2.8e-164 583.2 710 49.0
Carub.0001s0732 Capsella rubella HOM05D006884 ORTHO05D008604 1.4e-163 580.9 711 47.4
AT1G07970 Arabidopsis thaliana HOM05D006884 ORTHO05D008604 9.8e-162 574.7 713 47.1
Thhalv10006976m.g Eutrema salsugineum HOM05D006884 ORTHO05D008604 1.7e-161 573.9 714 47.5
Os03g0288800 Oryza sativa ssp. japonica HOM05D006884 ORTHO05D008604 4.9e-161 572.4 711 48.0
ECA238G4524 Erigeron canadensis HOM05D006884 ORTHO05D008604 6.4e-161 572.0 699 48.8
CARHR007750 Cardamine hirsuta HOM05D006884 ORTHO05D008604 2.4e-160 570.1 717 46.9
AL1G18300 Arabidopsis lyrata HOM05D006884 ORTHO05D008604 1.6e-159 567.4 717 47.3
Nitab4.5_0002186g0020 Nicotiana tabacum HOM05D006884 ORTHO05D008604 2.7e-159 566.6 664 49.7
BcaB02g06701 Brassica carinata HOM05D006884 ORTHO05D008604 6.0e-159 565.5 698 47.6
Sc06g0010010 Simmondsia chinensis HOM05D006884 ORTHO05D008604 1.3e-158 564.3 711 46.7
AUR62025009 Chenopodium quinoa HOM05D006884 ORTHO05D008604 6.6e-158 562.0 707 47.7
HPP92_025089 Vanilla planifolia HOM05D006884 ORTHO05D008604 7.3e-157 558.5 714 47.5
Hund10472 Selenicereus undatus HOM05D006884 ORTHO05D008604 9.5e-157 558.1 701 47.5
Lsat_1_v5_gn_2_97900 Lactuca sativa HOM05D006884 ORTHO05D008604 1.2e-156 557.8 701 47.1
Aa31LG8G13130 Aethionema arabicum HOM05D006884 ORTHO05D008604 1.6e-156 557.4 714 46.2
BcaC05g24709 Brassica carinata HOM05D006884 ORTHO05D008604 2.8e-156 556.6 669 49.2
Zm00001eb397080 Zea mays HOM05D006884 ORTHO05D008604 1.5e-154 550.8 715 46.0
AUR62006527 Chenopodium quinoa HOM05D006884 ORTHO05D008604 2.0e-154 550.4 707 46.5
CDE09G0273 Ceratophyllum demersum HOM05D006884 ORTHO05D008604 2.6e-154 550.1 660 48.9
Pp3c12_22070 Physcomitrium patens HOM05D006884 ORTHO05D008604 9.9e-154 548.1 715 48.1
Sabra09G0009400 Salix brachista HOM05D006884 ORTHO05D008604 1.4e-152 544.3 527 55.0
SMO364G0331 Selaginella moellendorffii HOM05D006884 ORTHO05D008604 5.4e-152 542.3 486 57.8
SGA_v2.0_scaffold2G00907 Striga asiatica HOM05D006884 ORTHO05D008604 1.6e-151 540.8 671 48.9
SalBow3G0672 Salvia bowleyana HOM05D006884 ORTHO05D008604 2.7e-151 540.0 704 47.0
Rhsim08G0043200 Rhododendron simsii HOM05D006884 ORTHO05D008604 2.8e-148 530.0 379 68.1
CAN.G631.5 Capsicum annuum HOM05D006884 ORTHO05D008604 1.1e-147 528.1 638 49.4
Ca_19247_v3 Cicer arietinum L. HOM05D006884 ORTHO05D008604 2.0e-146 523.9 711 46.3
CsaV3_1G012990 Cucumis sativus L. HOM05D006884 ORTHO05D008604 6.2e-132 475.7 622 47.4
Sp4g05030 Schrenkiella parvula HOM05D006884 ORTHO05D008604 1.9e-128 464.2 641 43.2
unitig_61.g26171 Utricularia gibba HOM05D006884 ORTHO05D008604 9.3e-120 435.3 407 57.0
Actinidia24083 Actinidia chinensis HOM05D006884 ORTHO05D008604 4.5e-114 416.4 303 66.7
BcaB07g34161 Brassica carinata HOM05D006884 ORTHO05D008604 1.6e-103 381.3 356 53.4
arahy.Tifrunner.gnm1.ann1.REDW7M Arachis hypogaea HOM05D006884 ORTHO05D008604 6.1e-103 379.4 279 62.7
Glyma.12G071233 Glycine max HOM05D006884 ORTHO05D008604 3.6e-55 220.7 216 54.2
SEGI_34075 Sequoiadendron giganteum HOM05D000114 ORTHO05D008604 4.9e-44 183.7 462 35.3
Nn1g02428 Nelumbo nucifera HOM05D006884 ORTHO05D008604 6.2e-39 166.8 107 74.8
Nn1g02077 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.2e-37 162.5 103 74.8
Nn3g17897 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.3e-36 159.1 103 72.8
Nn4g22222 Nelumbo nucifera HOM05D006884 ORTHO05D008604 2.4e-35 154.8 99 73.7
Nn4g22225 Nelumbo nucifera HOM05D006884 ORTHO05D008604 2.1e-26 125.2 83 72.3
Nn3g19002 Nelumbo nucifera HOM05D005115 ORTHO05D005703 1.7e-25 122.1 83 71.1
Actinidia24084 Actinidia chinensis HOM05D006884 ORTHO05D008604 7.9e-18 96.7 378 31.0
Cre12.g555200 Chlamydomonas reinhardtii HOM05D006884 ORTHO05D008604 1.9e-11 75.5 339 25.1
Aa31LG3G16570 Aethionema arabicum HOM05D006884 ORTHO05D008604 7.9e-10 70.1 180 30.6
Nn1g05254 Nelumbo nucifera HOM05D006884 ORTHO05D008604 1.3e-09 69.3 62 54.8
Nitab4.5_0002186g0030 Nicotiana tabacum HOM05D006884 ORTHO05D008604 7.4e-08 63.5 44 61.4
Nn1g03843 Nelumbo nucifera HOM05D006884 ORTHO05D008604 4.0e-06 57.8 66 48.5


User provided reference genes

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