Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 0.0e+00 1617.4 848 100.0
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 9.7e-310 1066.6 842 68.2
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 2.3e-303 1045.4 845 65.7
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 2.2e-301 1038.9 829 65.5
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 1.3e-298 1029.6 837 65.1
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 2.3e-298 1028.9 855 62.3
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 1.7e-293 1012.7 824 64.6
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 1.3e-290 1003.0 800 65.8
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 1.7e-290 1002.7 832 63.9
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 3.0e-290 1001.9 822 64.1
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 1.8e-287 992.6 823 64.6
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 2.3e-287 992.3 825 63.6
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 2.0e-286 989.2 830 64.0
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 7.5e-286 987.3 816 63.8
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 1.7e-285 986.1 832 62.6
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 2.2e-285 985.7 789 66.4
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 2.2e-285 985.7 823 63.7
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 3.7e-285 984.9 853 62.6
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 3.7e-285 984.9 832 62.7
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 4.9e-285 984.6 829 62.8
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 4.9e-285 984.6 820 63.5
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 6.4e-285 984.2 853 62.5
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 8.3e-285 983.8 828 62.0
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 2.4e-284 982.2 822 63.5
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 3.2e-284 981.9 834 62.5
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 1.6e-283 979.5 826 63.4
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 6.0e-283 977.6 821 63.7
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 1.0e-282 976.9 821 63.3
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 1.7e-282 976.1 821 63.2
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.7e-282 976.1 821 63.2
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 2.3e-282 975.7 829 62.6
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 3.0e-282 975.3 798 64.9
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 3.9e-282 974.9 828 62.7
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 6.6e-282 974.2 821 63.0
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 1.9e-281 972.6 824 62.6
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 5.6e-281 971.1 822 62.8
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 4.7e-280 968.0 823 62.5
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 6.2e-280 967.6 821 62.7
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 6.2e-280 967.6 822 63.1
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.8e-279 966.1 821 62.7
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 8.9e-279 963.8 824 63.2
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 1.2e-278 963.4 845 60.8
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 2.0e-278 962.6 836 62.4
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 7.6e-278 960.7 816 62.0
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.3e-277 959.9 764 65.8
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 6.4e-277 957.6 765 65.8
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 6.4e-277 957.6 824 62.4
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 8.4e-277 957.2 831 61.6
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 2.4e-276 955.7 837 62.4
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 4.1e-276 954.9 826 61.9
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 7.1e-276 954.1 821 62.6
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 7.1e-276 954.1 844 60.3
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 2.1e-275 952.6 834 61.2
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 7.8e-275 950.7 787 62.9
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 1.0e-274 950.3 823 61.6
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 2.3e-274 949.1 826 62.1
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 5.1e-274 948.0 854 59.6
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 5.1e-274 948.0 826 62.1
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 1.1e-273 946.8 825 62.2
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 2.1e-272 942.6 759 65.6
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 4.7e-272 941.4 824 62.1
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 8.1e-272 940.6 759 65.1
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 1.8e-271 939.5 825 61.8
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 3.1e-271 938.7 824 61.9
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 2.0e-270 936.0 784 62.2
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 5.8e-270 934.5 840 61.0
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 5.8e-270 934.5 822 61.8
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 7.6e-270 934.1 834 60.0
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 1.7e-269 932.9 825 61.6
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 3.8e-269 931.8 825 59.8
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 3.8e-269 931.8 827 60.9
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 1.1e-268 930.2 827 60.9
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 1.9e-268 929.5 822 60.9
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 2.4e-268 929.1 839 60.9
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 5.4e-268 927.9 887 57.3
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 7.1e-268 927.5 823 60.4
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 2.7e-267 925.6 833 59.7
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 2.7e-267 925.6 827 59.7
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 3.5e-267 925.2 827 59.9
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 3.5e-267 925.2 836 59.2
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 1.0e-266 923.7 832 59.4
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 1.0e-266 923.7 788 60.9
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 2.3e-266 922.5 788 60.8
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 6.6e-266 921.0 829 59.7
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 1.1e-265 920.2 759 64.6
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 1.5e-265 919.8 788 60.7
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 2.5e-265 919.1 820 60.7
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 2.5e-265 919.1 830 61.4
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 7.3e-265 917.5 848 59.0
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 9.6e-265 917.1 829 59.5
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 4.9e-261 904.8 899 54.7
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 3.2e-260 902.1 761 62.0
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 4.2e-260 901.7 796 60.8
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 1.6e-259 899.8 824 58.4
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 2.1e-259 899.4 810 58.1
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 2.7e-259 899.0 763 62.4
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 4.6e-259 898.3 932 53.5
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 2.1e-256 889.4 856 58.2
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 1.1e-255 887.1 733 62.2
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 9.9e-254 880.6 824 58.3
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 4.3e-249 865.1 830 56.6
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 2.1e-248 862.8 770 61.0
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 4.5e-246 855.1 676 65.4
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 7.6e-246 854.4 671 64.8
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 1.6e-243 846.7 652 66.3
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 8.7e-242 840.9 788 56.1
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 1.5e-241 840.1 653 66.0
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 1.5e-238 830.1 823 55.5
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 1.0e-234 817.4 641 65.8
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 2.5e-233 812.8 624 65.5
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 2.5e-228 796.2 929 50.5
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 1.5e-225 786.9 574 69.3
Rhsim12G0008000 Rhododendron simsii HOM05D005394 ORTHO05D006909 1.1e-196 691.0 831 49.5
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 3.1e-191 672.9 840 50.8
Cpa.g.sc2.203 Carica papaya HOM05D005394 ORTHO05D006909 3.1e-162 576.6 429 68.1
Oeu033979.1 Olea europaea HOM05D005394 ORTHO05D006909 2.4e-138 497.3 482 56.8
Cre17.g721900 Chlamydomonas reinhardtii HOM05D005394 ORTHO05D006909 2.6e-129 467.2 783 37.0
PRCOL_00001583 Prasinoderma coloniale HOM05D005394 ORTHO05D006909 6.0e-126 456.1 786 35.8
Actinidia12539 Actinidia chinensis HOM05D005394 ORTHO05D006909 9.6e-124 448.7 445 55.7
Atru.chr6.2063 Acer truncatum HOM05D005394 ORTHO05D006909 1.2e-121 441.8 321 71.7
MBI10_g36386_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 3.8e-120 436.8 379 62.5
MCO08G047 Micromonas commoda HOM05D005394 ORTHO05D006909 4.5e-113 413.3 850 33.4
CDE09G0652 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 4.7e-102 376.7 309 61.2
MBI10_g36389_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 3.1e-98 364.0 262 68.3
Cpa.g.sc2.200 Carica papaya HOM05D005394 ORTHO05D006909 2.2e-83 314.7 366 52.5
Actinidia12538 Actinidia chinensis HOM05D005394 ORTHO05D006909 4.2e-79 300.4 277 60.3
CSS0027861 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.2e-62 245.7 379 44.9
DCAR_032393 Daucus carota HOM05D005394 ORTHO05D011132 1.5e-47 195.7 140 69.3
HanXRQChr14g0428721 Helianthus annuus HOM05D005394 ORTHO05D006909 2.9e-43 181.4 138 67.4
Haze_13526 Corylus avellana HOM05D005394 ORTHO05D006909 4.9e-43 180.6 225 48.9
BcaB01g03482 Brassica carinata HOM05D005394 ORTHO05D006909 3.9e-40 171.0 131 62.6
CSS0006481 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.4e-37 162.5 143 63.6
CSS0027532 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 7.6e-28 130.2 161 49.1
CSS0047075 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 2.9e-27 128.3 155 44.5
CSS0003150 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 6.4e-27 127.1 155 45.2
unitig_748.g8066 Utricularia gibba HOM05D005394 ORTHO05D006909 5.6e-23 114.0 121 54.5
BcaB01g03481 Brassica carinata HOM05D005394 ORTHO05D006909 1.4e-10 72.8 70 54.3
Actinidia12535 Actinidia chinensis HOM05D005394 ORTHO05D055987 2.8e-06 58.5 221 26.2


User provided reference genes

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