Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11847 Sequoiadendron giganteum HOM05D002966 ORTHO05D003274 2.6e-144 515.8 347 100.0
SEGI_34566 Sequoiadendron giganteum HOM05D002966 ORTHO05D003274 5.9e-27 125.9 101 64.4
SEGI_38004 Sequoiadendron giganteum HOM05D002966 ORTHO05D003274 5.0e-18 96.3 99 52.5
SEGI_22110 Sequoiadendron giganteum HOM05D002966 ORTHO05D003274 1.6e-16 91.3 82 57.3
TAR627G0527 Trochodendron aralioides HOM05D002966 ORTHO05D003274 4.8e-13 79.7 101 46.5
ATR0053G034 Amborella trichopoda HOM05D002966 ORTHO05D003274 8.2e-13 79.0 101 44.6
Manes.05G205500 Manihot esculenta HOM05D002966 ORTHO05D003274 1.1e-12 78.6 101 43.6
Ciclev10009431m.g Citrus clementina HOM05D002966 ORTHO05D003274 1.4e-12 78.2 102 47.1
MBI15_g37117_MAGBIO Magnolia biondii HOM05D002966 ORTHO05D003274 1.4e-12 78.2 101 47.5
Dinv40901 Davidia involucrata HOM05D002966 ORTHO05D003274 2.4e-12 77.4 98 45.9
Dinv19651 Davidia involucrata HOM05D002966 ORTHO05D003274 3.1e-12 77.0 102 46.1
Potri.001G470800 Populus trichocarpa HOM05D002966 ORTHO05D003274 7.0e-12 75.9 101 42.6
TWI38G1586 Tripterygium wilfordii HOM05D002966 ORTHO05D003274 7.0e-12 75.9 78 53.8
Potri.011G167900 Populus trichocarpa HOM05D002966 ORTHO05D003274 9.1e-12 75.5 101 41.6
Cpa.g.sc12.79 Carica papaya HOM05D002966 ORTHO05D003274 1.2e-11 75.1 103 43.7
Manes.01G005512 Manihot esculenta HOM05D002966 ORTHO05D003274 1.2e-11 75.1 101 40.6
Atru.chr2.3783 Acer truncatum HOM05D002966 ORTHO05D003274 1.5e-11 74.7 103 43.7
Prupe.6G033100 Prunus persica HOM05D002966 ORTHO05D003274 2.0e-11 74.3 101 42.6
FvH4_3g41800 Fragaria vesca HOM05D002966 ORTHO05D003274 2.6e-11 73.9 101 43.6
FAN11G0932 Fragaria x ananassa HOM05D002966 ORTHO05D003274 2.6e-11 73.9 101 43.6
FAN16G1675 Fragaria x ananassa HOM05D002966 ORTHO05D003274 2.6e-11 73.9 101 43.6
CiPaw.12G142200 Carya illinoinensis HOM05D002966 ORTHO05D003274 3.5e-11 73.6 104 42.3
MBI14_g43562_MAGBIO Magnolia biondii HOM05D002966 ORTHO05D003274 3.5e-11 73.6 92 48.9
TWI38G2168 Tripterygium wilfordii HOM05D002966 ORTHO05D003274 3.5e-11 73.6 78 50.0
Lj6g0000831 Lotus japonicus HOM05D002966 ORTHO05D003274 4.5e-11 73.2 74 51.4
MBI14_g12725_MAGBIO Magnolia biondii HOM05D002966 ORTHO05D003274 4.5e-11 73.2 92 48.9
Gohir.A04G001800 Gossypium hirsutum HOM05D002966 ORTHO05D003274 5.9e-11 72.8 74 54.1
Gohir.D05G387600 Gossypium hirsutum HOM05D002966 ORTHO05D003274 5.9e-11 72.8 74 54.1
Gorai.009G454200 Gossypium raimondii HOM05D002966 ORTHO05D003274 5.9e-11 72.8 74 54.1
Cc05_g15590 Coffea canephora HOM05D002966 ORTHO05D003274 7.7e-11 72.4 73 53.4
FAN25G0015 Fragaria x ananassa HOM05D002966 ORTHO05D003274 7.7e-11 72.4 101 42.6
QL08p000737 Quercus lobata HOM05D002966 ORTHO05D003274 1.0e-10 72.0 107 43.0
Sabra16G0319400 Salix brachista HOM05D002966 ORTHO05D003274 1.0e-10 72.0 116 40.5
SGA_v2.0_scaffold186G40235 Striga asiatica HOM05D002966 ORTHO05D003274 1.7e-10 71.2 114 41.2
FAN21G2136 Fragaria x ananassa HOM05D002966 ORTHO05D003274 2.2e-10 70.9 101 42.6
Rhsim06G0234400 Rhododendron simsii HOM05D002966 ORTHO05D003274 2.2e-10 70.9 103 41.7
Duzib213G0028 Durio zibethinus HOM05D002966 ORTHO05D003274 2.9e-10 70.5 74 51.4
Eucgr.F02000 Eucalyptus grandis HOM05D002966 ORTHO05D003274 2.9e-10 70.5 74 51.4
Haze_09906 Corylus avellana HOM05D002966 ORTHO05D003274 3.8e-10 70.1 103 41.7
Oeu013012.1 Olea europaea HOM05D002966 ORTHO05D003274 3.8e-10 70.1 74 50.0
MSTRG.15825 Avicennia marina HOM05D002966 ORTHO05D003274 5.0e-10 69.7 100 45.0
Lsat_1_v5_gn_7_116241 Lactuca sativa HOM05D002966 ORTHO05D003274 5.0e-10 69.7 103 44.7
RcHm_v2.0_Chr5g0074881 Rosa chinensis HOM05D002966 ORTHO05D003274 5.0e-10 69.7 101 41.6
Sabra11G0138600 Salix brachista HOM05D002966 ORTHO05D003274 5.0e-10 69.7 99 41.4
Thecc.07G003000 Theobroma cacao HOM05D002966 ORTHO05D003274 6.5e-10 69.3 102 44.1
PSO541G5304 Papaver somniferum HOM05D002966 ORTHO05D003274 8.5e-10 68.9 67 56.7
Phvul.006G061800 Phaseolus vulgaris HOM05D002966 ORTHO05D003274 1.1e-09 68.6 74 51.4
PGR083G0197 Punica granatum HOM05D002966 ORTHO05D003274 1.5e-09 68.2 101 42.6
arahy.Tifrunner.gnm1.ann1.2YA2DE Arachis hypogaea HOM05D002966 ORTHO05D003274 2.5e-09 67.4 109 42.2
arahy.Tifrunner.gnm1.ann1.E7G0ZI Arachis hypogaea HOM05D002966 ORTHO05D003274 2.5e-09 67.4 109 42.2
Lj8P182T56 Lonicera japonica HOM05D002966 ORTHO05D003274 2.5e-09 67.4 73 47.9
Solyc07g066040.1 Solanum lycopersicum HOM05D002966 ORTHO05D003274 2.5e-09 67.4 102 40.2
VMungo0540G2097 Vigna mungo HOM05D002966 ORTHO05D003274 2.5e-09 67.4 108 42.6
PSO478G3370 Papaver somniferum HOM05D002966 ORTHO05D003274 3.2e-09 67.0 68 54.4
PSO675G7699 Papaver somniferum HOM05D002966 ORTHO05D003274 3.2e-09 67.0 66 56.1
Sopen07g034230 Solanum pennellii HOM05D002966 ORTHO05D003274 3.2e-09 67.0 102 40.2
PGSC0003DMG400046514 Solanum tuberosum HOM05D002966 ORTHO05D003274 3.2e-09 67.0 102 40.2
CSS0042760 Camellia sinensis var. sinensis HOM05D002966 ORTHO05D003274 4.2e-09 66.6 74 47.3
CSS0049951 Camellia sinensis var. sinensis HOM05D002966 ORTHO05D003274 4.2e-09 66.6 74 47.3
Migut.M01590 Erythranthe guttata HOM05D002966 ORTHO05D003274 7.2e-09 65.9 102 41.2
SalBow8G4530 Salvia bowleyana HOM05D002966 ORTHO05D003274 7.2e-09 65.9 101 42.6
HanXRQChr05g0160161 Helianthus annuus HOM05D002966 ORTHO05D003274 1.2e-08 65.1 101 40.6
Hma1.2p1_0321F.1_g124220 Hydrangea macrophylla HOM05D002966 ORTHO05D003274 1.2e-08 65.1 92 43.5
Glyma.18G071400 Glycine max HOM05D002966 ORTHO05D003274 2.1e-08 64.3 110 41.8
HanXRQChr14g0431341 Helianthus annuus HOM05D002966 ORTHO05D003274 2.1e-08 64.3 102 40.2
THA.LOC104811695 Tarenaya hassleriana HOM05D002966 ORTHO05D003274 2.7e-08 63.9 103 37.9
Ca_14869_v3 Cicer arietinum L. HOM05D002966 ORTHO05D003274 3.6e-08 63.5 72 47.2
Glyma.08G336300 Glycine max HOM05D002966 ORTHO05D003274 4.7e-08 63.2 108 41.7
Nitab4.5_0001303g0030 Nicotiana tabacum HOM05D002966 ORTHO05D003274 4.7e-08 63.2 63 55.6
BcaC04g20140 Brassica carinata HOM05D002966 ORTHO05D003274 6.1e-08 62.8 99 35.4
CAN.G623.65 Capsicum annuum HOM05D002966 ORTHO05D003274 1.0e-07 62.0 102 37.3
Sed0011072 Sechium edule HOM05D002966 ORTHO05D003274 1.4e-07 61.6 111 38.7
Medtr3g461540 Medicago truncatula HOM05D002966 ORTHO05D003274 1.8e-07 61.2 73 49.3
HPP92_017987 Vanilla planifolia HOM05D002966 ORTHO05D003274 1.8e-07 61.2 103 36.9
CARHR269500 Cardamine hirsuta HOM05D002966 ORTHO05D003274 2.3e-07 60.8 72 44.4
AL8G31750 Arabidopsis lyrata HOM05D002966 ORTHO05D003274 3.0e-07 60.5 72 44.4
AT5G56120 Arabidopsis thaliana HOM05D002966 ORTHO05D003274 3.0e-07 60.5 72 44.4
Carub.0008s1644 Capsella rubella HOM05D002966 ORTHO05D003274 3.0e-07 60.5 72 44.4
CsaV3_3G004370 Cucumis sativus L. HOM05D002966 ORTHO05D003274 4.0e-07 60.1 96 42.7
Thhalv10014555m.g Eutrema salsugineum HOM05D002966 ORTHO05D003274 4.0e-07 60.1 72 44.4
Sed0019904 Sechium edule HOM05D002966 ORTHO05D003274 4.0e-07 60.1 96 40.6
BcaB08g35977 Brassica carinata HOM05D002966 ORTHO05D003274 5.2e-07 59.7 72 44.4
A10p13340 Brassica napus HOM05D002966 ORTHO05D003274 5.2e-07 59.7 72 44.4
C09p47270 Brassica napus HOM05D002966 ORTHO05D003274 5.2e-07 59.7 72 44.4
BolC9t57584H Brassica oleracea HOM05D002966 ORTHO05D003274 5.2e-07 59.7 72 44.4
BraA10t43435Z Brassica rapa HOM05D002966 ORTHO05D003274 5.2e-07 59.7 72 44.4
MELO3C014130.2 Cucumis melo HOM05D002966 ORTHO05D003274 5.2e-07 59.7 96 43.8
Sp6g17970 Schrenkiella parvula HOM05D002966 ORTHO05D003274 5.2e-07 59.7 72 44.4
COL.COLO4_07779 Corchorus olitorius HOM05D002966 ORTHO05D003274 6.7e-07 59.3 79 46.8
Aa31LG3G12030 Aethionema arabicum HOM05D002966 ORTHO05D003274 8.8e-07 58.9 73 43.8
ATR0763G105 Amborella trichopoda HOM05D002966 ORTHO05D003274 1.5e-06 58.2 91 35.2
Psat5g164040 Pisum sativum HOM05D002966 ORTHO05D003274 1.5e-06 58.2 105 41.0
ClCG10G004550 Citrullus lanatus HOM05D002966 ORTHO05D003274 2.0e-06 57.8 120 38.3
CANSAT11G1295 Cannabis sativa HOM05D002966 ORTHO05D003274 3.3e-06 57.0 104 39.4
MD10G1204600 Malus domestica HOM05D002966 ORTHO05D003274 3.3e-06 57.0 99 32.3
Migut.H01679 Erythranthe guttata HOM05D002966 ORTHO05D003274 4.4e-06 56.6 98 36.7
TPR.G14730 Trifolium pratense HOM05D002966 ORTHO05D003274 4.4e-06 56.6 74 48.6
MBI02_g00520_MAGBIO Magnolia biondii HOM05D002966 ORTHO05D003274 9.7e-06 55.5 91 36.3


User provided reference genes

Program Settings