Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11758 Sequoiadendron giganteum HOM05D000747 ORTHO05D004807 1.8e-265 918.7 468 100.0
ATR0693G276 Amborella trichopoda HOM05D000747 ORTHO05D004807 6.1e-112 408.7 474 47.0
MBI18_g27389_MAGBIO Magnolia biondii HOM05D000747 ORTHO05D004807 3.2e-105 386.3 470 46.8
QL06p013303 Quercus lobata HOM05D000747 ORTHO05D004807 2.6e-102 376.7 472 46.6
TAR633G1529 Trochodendron aralioides HOM05D000747 ORTHO05D004807 7.5e-102 375.2 475 45.3
GSVIVG01034942001 Vitis vinifera HOM05D000747 ORTHO05D004807 4.9e-101 372.5 476 46.6
TAR362G0993 Trochodendron aralioides HOM05D000747 ORTHO05D004807 1.1e-100 371.3 473 45.5
Nn3g21805 Nelumbo nucifera HOM05D000747 ORTHO05D004807 1.2e-99 367.9 477 45.5
AagrBONN_evm.TU.Sc2ySwM_340.498 Anthoceros agrestis HOM05D000747 ORTHO05D004807 2.3e-98 363.6 477 43.2
Lsat_1_v5_gn_6_70541 Lactuca sativa HOM05D000747 ORTHO05D004807 2.9e-98 363.2 475 44.4
Lalb_Chr15g0089041 Lupinus albus HOM05D000747 ORTHO05D004807 1.9e-97 360.5 474 45.1
Gohir.D09G242100 Gossypium hirsutum HOM05D000747 ORTHO05D004807 3.3e-97 359.8 473 43.6
Glyma.17G037600 Glycine max HOM05D000747 ORTHO05D004807 4.2e-97 359.4 475 44.2
Phvul.003G118500 Phaseolus vulgaris HOM05D000747 ORTHO05D004807 5.5e-97 359.0 475 44.6
CiPaw.01G133500 Carya illinoinensis HOM05D000747 ORTHO05D004807 7.2e-97 358.6 475 45.1
VMungo1215G1053 Vigna mungo HOM05D000747 ORTHO05D004807 9.5e-97 358.2 472 44.3
Mapoly0140s0005 Marchantia polymorpha HOM05D000747 ORTHO05D004807 1.2e-96 357.8 471 44.8
Glyma.07G235800 Glycine max HOM05D000747 ORTHO05D004807 2.8e-96 356.7 480 44.2
Gorai.006G265700 Gossypium raimondii HOM05D000747 ORTHO05D004807 2.8e-96 356.7 473 43.3
Glyma.15G137000 Glycine max HOM05D000747 ORTHO05D004807 1.8e-95 354.0 474 44.5
Duzib151G0433 Durio zibethinus HOM05D000747 ORTHO05D004807 2.3e-95 353.6 478 44.1
Lj6g0013861 Lotus japonicus HOM05D000747 ORTHO05D004807 4.0e-95 352.8 472 43.6
Actinidia18481 Actinidia chinensis HOM05D000747 ORTHO05D004807 5.2e-95 352.4 476 44.7
RcHm_v2.0_Chr4g0426201 Rosa chinensis HOM05D000747 ORTHO05D004807 5.2e-95 352.4 479 45.1
Atru.chr4.3105 Acer truncatum HOM05D000747 ORTHO05D004807 6.8e-95 352.1 472 45.1
Gohir.A09G241400 Gossypium hirsutum HOM05D000747 ORTHO05D004807 1.2e-94 351.3 471 42.9
Phvul.006G120900 Phaseolus vulgaris HOM05D000747 ORTHO05D004807 1.2e-94 351.3 473 45.0
Thecc.04G307300 Theobroma cacao HOM05D000747 ORTHO05D004807 1.2e-94 351.3 476 43.9
TWI53G1735 Tripterygium wilfordii HOM05D000747 ORTHO05D004807 1.2e-94 351.3 476 43.9
FAN07G0175 Fragaria x ananassa HOM05D000747 ORTHO05D004807 2.6e-94 350.1 484 45.0
arahy.Tifrunner.gnm1.ann1.NSV5VW Arachis hypogaea HOM05D000747 ORTHO05D004807 3.4e-94 349.7 472 42.8
Duzib212G0904 Durio zibethinus HOM05D000747 ORTHO05D004807 4.4e-94 349.4 477 45.3
Potri.008G101300 Populus trichocarpa HOM05D000747 ORTHO05D004807 5.7e-94 349.0 473 44.2
Dinv15128 Davidia involucrata HOM05D000747 ORTHO05D004807 1.3e-93 347.8 475 44.4
FvH4_4g20760 Fragaria vesca HOM05D000747 ORTHO05D004807 2.2e-93 347.1 480 44.8
arahy.Tifrunner.gnm1.ann1.YUC3W2 Arachis hypogaea HOM05D000747 ORTHO05D004807 2.9e-93 346.7 473 44.0
CANSAT78G0170 Cannabis sativa HOM05D000747 ORTHO05D004807 3.7e-93 346.3 475 43.2
MD16G1148200 Malus domestica HOM05D000747 ORTHO05D004807 4.9e-93 345.9 474 43.9
Ca_00947_v3 Cicer arietinum L. HOM05D000747 ORTHO05D004807 8.3e-93 345.1 474 43.2
Prupe.1G111600 Prunus persica HOM05D000747 ORTHO05D004807 1.4e-92 344.4 480 43.5
Sabra08G0076600 Salix brachista HOM05D000747 ORTHO05D004807 1.4e-92 344.4 473 43.6
THA.LOC104820321 Tarenaya hassleriana HOM05D000747 ORTHO05D004807 1.4e-92 344.4 476 44.1
Cpa.g.sc146.73 Carica papaya HOM05D000747 ORTHO05D004807 1.8e-92 344.0 476 43.1
arahy.Tifrunner.gnm1.ann1.R130QB Arachis hypogaea HOM05D000747 ORTHO05D004807 5.4e-92 342.4 473 43.6
Hma1.2p1_1096F.1_g256630 Hydrangea macrophylla HOM05D000747 ORTHO05D004807 5.4e-92 342.4 479 43.8
MD13G1148100 Malus domestica HOM05D000747 ORTHO05D004807 5.4e-92 342.4 474 43.7
ClCG06G004370 Citrullus lanatus HOM05D000747 ORTHO05D004807 7.0e-92 342.0 480 42.7
Gorai.011G204200 Gossypium raimondii HOM05D000747 ORTHO05D004807 7.0e-92 342.0 477 43.2
arahy.Tifrunner.gnm1.ann1.CPQB8S Arachis hypogaea HOM05D000747 ORTHO05D004807 1.2e-91 341.3 491 41.8
Manes.03G208600 Manihot esculenta HOM05D000747 ORTHO05D004807 1.2e-91 341.3 474 43.2
Potri.010G150000 Populus trichocarpa HOM05D000747 ORTHO05D004807 1.2e-91 341.3 476 43.9
Gohir.D10G182300 Gossypium hirsutum HOM05D000747 ORTHO05D004807 1.6e-91 340.9 477 43.2
Carub.0003s1696 Capsella rubella HOM05D000747 ORTHO05D004807 4.6e-91 339.3 472 41.7
Sabra10G0115600 Salix brachista HOM05D000747 ORTHO05D004807 5.9e-91 339.0 474 43.2
Ciclev10004231m.g Citrus clementina HOM05D000747 ORTHO05D004807 7.8e-91 338.6 474 42.8
MELO3C021252.2 Cucumis melo HOM05D000747 ORTHO05D004807 1.3e-90 337.8 484 42.6
CAN.G170.17 Capsicum annuum HOM05D000747 ORTHO05D004807 3.9e-90 336.3 474 42.4
CAN.G3221.1 Capsicum annuum HOM05D000747 ORTHO05D004807 3.9e-90 336.3 474 42.4
Eucgr.B03986 Eucalyptus grandis HOM05D000747 ORTHO05D004807 3.9e-90 336.3 475 42.7
Oeu052157.1 Olea europaea HOM05D000747 ORTHO05D004807 3.9e-90 336.3 477 43.6
FAN17G1353 Fragaria x ananassa HOM05D000747 ORTHO05D004807 5.0e-90 335.9 484 44.2
Sed0003045 Sechium edule HOM05D000747 ORTHO05D004807 1.1e-89 334.7 477 41.9
Peaxi162Scf00126g01514 Petunia axillaris HOM05D000747 ORTHO05D004807 1.5e-89 334.3 477 42.3
Sed0005984 Sechium edule HOM05D000747 ORTHO05D004807 1.9e-89 334.0 476 40.8
Gohir.A10G175700 Gossypium hirsutum HOM05D000747 ORTHO05D004807 2.5e-89 333.6 479 41.3
HanXRQChr06g0182841 Helianthus annuus HOM05D000747 ORTHO05D004807 7.3e-89 332.0 475 42.5
AL3G30230 Arabidopsis lyrata HOM05D000747 ORTHO05D004807 1.2e-88 331.3 475 41.9
Sc25g0001570 Simmondsia chinensis HOM05D000747 ORTHO05D004807 1.6e-88 330.9 476 42.0
Psat1g162680 Pisum sativum HOM05D000747 ORTHO05D004807 3.6e-88 329.7 470 41.9
vmacro07974 Vaccinium macrocarpon HOM05D000747 ORTHO05D004807 3.6e-88 329.7 487 43.1
PSO761G0701 Papaver somniferum HOM05D000747 ORTHO05D004807 4.7e-88 329.3 475 41.7
TPR.G10108 Trifolium pratense HOM05D000747 ORTHO05D004807 4.7e-88 329.3 472 42.2
Cc03_g00480 Coffea canephora HOM05D000747 ORTHO05D004807 1.0e-87 328.2 479 43.8
Solyc01g057900.3 Solanum lycopersicum HOM05D000747 ORTHO05D004807 1.8e-87 327.4 473 42.3
AT3G17205 Arabidopsis thaliana HOM05D000747 ORTHO05D004807 2.3e-87 327.0 475 41.1
Sopen01g023220 Solanum pennellii HOM05D000747 ORTHO05D004807 4.0e-87 326.2 473 42.1
Thhalv10019984m.g Eutrema salsugineum HOM05D000747 ORTHO05D004807 6.8e-87 325.5 474 40.9
CSS0023043 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D004807 8.9e-87 325.1 474 43.7
Sp3g15400 Schrenkiella parvula HOM05D000747 ORTHO05D004807 8.9e-87 325.1 478 42.1
AUR62002590 Chenopodium quinoa HOM05D000747 ORTHO05D004807 1.5e-86 324.3 476 42.4
PSO210G6954 Papaver somniferum HOM05D000747 ORTHO05D004807 2.0e-86 323.9 475 41.7
Medtr2g033040 Medicago truncatula HOM05D000747 ORTHO05D004807 3.4e-86 323.2 471 41.2
ECA233G3437 Erigeron canadensis HOM05D000747 ORTHO05D004807 5.8e-86 322.4 483 41.8
BolC5t33666H Brassica oleracea HOM05D000747 ORTHO05D004807 7.5e-86 322.0 478 40.8
BcaC05g28820 Brassica carinata HOM05D000747 ORTHO05D004807 9.8e-86 321.6 477 40.7
Pp3c17_16520 Physcomitrium patens HOM05D000747 ORTHO05D004807 2.9e-85 320.1 478 41.0
Aa31LG8G4180 Aethionema arabicum HOM05D000747 ORTHO05D004807 3.7e-85 319.7 475 40.2
Aqoxy2G02629 Aquilegia oxysepala HOM05D000747 ORTHO05D004807 1.1e-84 318.2 509 39.5
BcaC09g48678 Brassica carinata HOM05D000747 ORTHO05D004807 1.9e-84 317.4 477 40.7
SGA_v2.0_scaffold157G37358 Striga asiatica HOM05D000747 ORTHO05D004807 1.9e-84 317.4 472 42.2
C05p49250 Brassica napus HOM05D000747 ORTHO05D004807 2.4e-84 317.0 478 40.6
BraA01t03772Z Brassica rapa HOM05D000747 ORTHO05D004807 3.2e-84 316.6 478 40.6
EL10Ac3g06290 Beta vulgaris HOM05D000747 ORTHO05D004807 4.1e-84 316.2 475 41.5
A01p37100 Brassica napus HOM05D000747 ORTHO05D004807 5.4e-84 315.8 478 41.0
Rhsim04G0243000 Rhododendron simsii HOM05D000747 ORTHO05D004807 5.4e-84 315.8 551 38.3
BolC1t04670H Brassica oleracea HOM05D000747 ORTHO05D004807 2.0e-83 313.9 478 40.8
A05p32580 Brassica napus HOM05D000747 ORTHO05D004807 4.6e-83 312.8 476 40.5
C01p47020 Brassica napus HOM05D000747 ORTHO05D004807 4.6e-83 312.8 478 40.6
BraA05t22082Z Brassica rapa HOM05D000747 ORTHO05D004807 4.6e-83 312.8 476 40.5
Os05g0159000 Oryza sativa ssp. japonica HOM05D000747 ORTHO05D004807 4.6e-83 312.8 475 41.5
HPP92_015995 Vanilla planifolia HOM05D000747 ORTHO05D004807 4.6e-83 312.8 471 41.0
BcaB06g25812 Brassica carinata HOM05D000747 ORTHO05D004807 6.0e-83 312.4 476 40.8
MSTRG.10174 Avicennia marina HOM05D000747 ORTHO05D004807 6.6e-82 308.9 470 39.8
CDE11G0596 Ceratophyllum demersum HOM05D000747 ORTHO05D004807 8.6e-82 308.5 474 41.1
CDE05G1257 Ceratophyllum demersum HOM05D000747 ORTHO05D004807 1.9e-81 307.4 472 41.5
Migut.G00024 Erythranthe guttata HOM05D000747 ORTHO05D004807 1.9e-81 307.4 475 39.4
PGR031G1986 Punica granatum HOM05D000747 ORTHO05D004807 5.6e-81 305.8 476 39.7
BcaB04g20855 Brassica carinata HOM05D000747 ORTHO05D004807 3.6e-80 303.1 478 39.5
CARHR092470 Cardamine hirsuta HOM05D000747 ORTHO05D004807 1.2e-78 298.1 425 41.2
DCAR_002525 Daucus carota HOM05D000747 ORTHO05D004807 3.4e-78 296.6 474 40.9
Lj3A836G20 Lonicera japonica HOM05D000747 ORTHO05D004807 4.9e-77 292.7 487 38.0
CSS0019056 Camellia sinensis var. sinensis HOM05D000747 ORTHO05D004807 4.6e-75 286.2 449 40.8
SMO165G0153 Selaginella moellendorffii HOM05D000747 ORTHO05D004807 3.6e-72 276.6 477 38.4
Haze_00834 Corylus avellana HOM05D000747 ORTHO05D004807 3.1e-71 273.5 504 38.1
Aqoxy5G03355 Aquilegia oxysepala HOM05D000747 ORTHO05D004807 1.5e-70 271.2 490 36.9
CAN.G170.20 Capsicum annuum HOM05D000747 ORTHO05D004807 4.1e-68 263.1 395 40.0
Ah.07g203890 Amaranthus hybridus HOM05D000747 ORTHO05D004807 7.1e-68 262.3 472 37.1
AUR62030014 Chenopodium quinoa HOM05D000747 ORTHO05D004807 9.2e-68 261.9 471 36.9
Hund12236 Selenicereus undatus HOM05D000747 ORTHO05D004807 6.6e-66 255.8 608 31.9
SalBow8G1635 Salvia bowleyana HOM05D000747 ORTHO05D004807 4.8e-56 223.0 379 36.4
Nitab4.5_0005403g0020 Nicotiana tabacum HOM05D000747 ORTHO05D004807 4.9e-53 213.0 331 41.4
Nitab4.5_0001334g0040 Nicotiana tabacum HOM05D000747 ORTHO05D004807 3.5e-51 206.8 370 36.2
Duzib052G0753 Durio zibethinus HOM05D000747 ORTHO05D004807 4.9e-37 159.8 187 50.8
COL.COLO4_34559 Corchorus olitorius HOM05D000747 ORTHO05D004807 3.9e-34 150.2 171 50.9
Medtr2g033080 Medicago truncatula HOM05D000747 ORTHO05D004807 2.4e-31 141.0 251 37.5
AL947U10010 Arabidopsis lyrata HOM05D000747 ORTHO05D004807 6.9e-31 139.4 173 38.7
Zm00001eb412620 Zea mays HOM05D000747 ORTHO05D004807 2.6e-30 137.5 205 42.4
Gohir.A12G078600 Gossypium hirsutum HOM05D000747 ORTHO05D028421 1.4e-28 131.7 166 41.6
Medtr2g033055 Medicago truncatula HOM05D000747 ORTHO05D004807 1.3e-26 125.2 172 44.8
unitig_88.g27699 Utricularia gibba HOM05D000747 ORTHO05D004807 3.7e-24 117.1 290 31.4
SHI00092 Sapria himalayana HOM05D000747 ORTHO05D004807 6.9e-23 112.8 204 37.7
SalBow8G3583 Salvia bowleyana HOM05D000747 ORTHO05D004807 1.5e-17 95.1 124 46.0
Actinidia31572 Actinidia chinensis HOM05D000747 ORTHO05D004807 3.1e-15 87.4 471 25.5
CsaV3_6G020210 Cucumis sativus L. HOM05D000747 ORTHO05D004807 6.1e-11 73.2 152 31.6
CsaV3_6G021240 Cucumis sativus L. HOM05D000747 ORTHO05D004807 8.8e-10 69.3 97 36.1
SGA_v2.0_scaffold64G22058 Striga asiatica HOM05D000747 ORTHO05D004807 4.4e-09 67.0 83 43.4
HPP92_015992 Vanilla planifolia HOM05D000747 ORTHO05D004807 3.7e-08 63.9 101 44.6
MD16G1155700 Malus domestica HOM05D000747 ORTHO05D004807 3.5e-06 57.4 163 31.9
SHI00093 Sapria himalayana HOM05D000747 ORTHO05D028421 7.7e-06 56.2 53 58.5


User provided reference genes

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