Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11704 Sequoiadendron giganteum HOM05D004748 ORTHO05D006250 4.5e-129 464.5 224 100.0
SEGI_09816 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 1.8e-45 186.8 95 94.7
SEGI_18535 Sequoiadendron giganteum HOM05D005141 ORTHO05D006250 8.4e-43 177.9 95 90.5
SEGI_38178 Sequoiadendron giganteum HOM05D001476 ORTHO05D002681 3.6e-17 92.8 198 34.8
SEGI_05538 Sequoiadendron giganteum HOM05D004748 ORTHO05D005825 1.0e-11 74.7 37 94.6
SEGI_16972 Sequoiadendron giganteum HOM05D001476 ORTHO05D019195 1.3e-11 74.3 112 42.9
SEGI_23468 Sequoiadendron giganteum HOM05D001476 ORTHO05D019195 1.3e-11 74.3 112 42.9
SMO228G0169 Selaginella moellendorffii HOM05D004748 ORTHO05D005825 1.4e-08 64.3 37 78.4
CSS0006652 Camellia sinensis var. sinensis HOM05D004748 ORTHO05D005825 1.8e-08 63.9 37 81.1
Cfa002138 Carpinus fangiana HOM05D004748 ORTHO05D005825 1.8e-08 63.9 38 78.9
CiPaw.01G089000 Carya illinoinensis HOM05D004748 ORTHO05D005825 1.8e-08 63.9 38 78.9
Haze_16292 Corylus avellana HOM05D004748 ORTHO05D005825 1.8e-08 63.9 38 78.9
Nn8g40686 Nelumbo nucifera HOM05D004748 ORTHO05D005825 1.8e-08 63.9 37 81.1
GSVIVG01029603001 Vitis vinifera HOM05D004748 ORTHO05D005825 1.8e-08 63.9 37 81.1
GSVIVG01029613001 Vitis vinifera HOM05D004748 ORTHO05D005825 1.8e-08 63.9 37 81.1
GSVIVG01029626001 Vitis vinifera HOM05D004748 ORTHO05D005825 1.8e-08 63.9 37 81.1
TWI12G1435 Tripterygium wilfordii HOM05D004748 ORTHO05D005825 2.3e-08 63.5 38 78.9
Duzib235G0633 Durio zibethinus HOM05D004748 ORTHO05D005825 3.9e-08 62.8 38 76.3
Lj9C541G21 Lonicera japonica HOM05D004748 ORTHO05D001811 3.9e-08 62.8 37 78.4
Cpa.g.sc67.6 Carica papaya HOM05D004748 ORTHO05D005825 5.1e-08 62.4 37 78.4
Cc04_g00320 Coffea canephora HOM05D004748 ORTHO05D005825 5.1e-08 62.4 37 78.4
MELO3C024289.2 Cucumis melo HOM05D004748 ORTHO05D005825 5.1e-08 62.4 37 78.4
Dinv20350 Davidia involucrata HOM05D004748 ORTHO05D005825 5.1e-08 62.4 37 78.4
Eucgr.F04020 Eucalyptus grandis HOM05D004748 ORTHO05D005825 5.1e-08 62.4 38 76.3
Lj3g0017034 Lotus japonicus HOM05D004748 ORTHO05D005825 5.1e-08 62.4 37 78.4
Sed0019048 Sechium edule HOM05D004748 ORTHO05D005825 5.1e-08 62.4 37 75.7
SGA_v2.0_scaffold71G24004 Striga asiatica HOM05D004748 ORTHO05D005825 5.1e-08 62.4 37 78.4
CANSAT01G3164 Cannabis sativa HOM05D004748 ORTHO05D005825 6.7e-08 62.0 37 75.7
ECA234G0898 Erigeron canadensis HOM05D004748 ORTHO05D005825 6.7e-08 62.0 49 61.2
Glyma.07G020100 Glycine max HOM05D004748 ORTHO05D005825 6.7e-08 62.0 37 78.4
Glyma.08G222000 Glycine max HOM05D004748 ORTHO05D005825 6.7e-08 62.0 37 78.4
HanXRQChr10g0311461 Helianthus annuus HOM05D004748 ORTHO05D005825 6.7e-08 62.0 49 61.2
Lsat_1_v5_gn_5_137380 Lactuca sativa HOM05D004748 ORTHO05D005825 6.7e-08 62.0 49 61.2
Manes.03G081362 Manihot esculenta HOM05D004748 ORTHO05D005825 6.7e-08 62.0 37 78.4
Medtr4g008150 Medicago truncatula HOM05D004748 ORTHO05D005825 6.7e-08 62.0 37 78.4
Phvul.008G254900 Phaseolus vulgaris HOM05D004748 ORTHO05D005825 6.7e-08 62.0 37 78.4
Psat7g261000 Pisum sativum HOM05D004748 ORTHO05D005825 6.7e-08 62.0 37 78.4
Prupe.3G019200 Prunus persica HOM05D004748 ORTHO05D005825 6.7e-08 62.0 37 78.4
Sc12g0011080 Simmondsia chinensis HOM05D004748 ORTHO05D005825 6.7e-08 62.0 37 78.4
TPR.G15725 Trifolium pratense HOM05D004748 ORTHO05D005825 6.7e-08 62.0 37 78.4
VMungo0647G1450 Vigna mungo HOM05D004748 ORTHO05D005825 6.7e-08 62.0 37 78.4
Rhsim12G0214600 Rhododendron simsii HOM05D004748 ORTHO05D005825 8.8e-08 61.6 37 78.4
vmacro17059 Vaccinium macrocarpon HOM05D004748 ORTHO05D005825 8.8e-08 61.6 37 78.4
HPP92_026143 Vanilla planifolia HOM05D004748 ORTHO05D005825 8.8e-08 61.6 37 75.7
ATR0580G210 Amborella trichopoda HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 75.7
EL10Ac7g18182 Beta vulgaris HOM05D004748 ORTHO05D005825 1.1e-07 61.2 38 76.3
AUR62001358 Chenopodium quinoa HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 73.0
AUR62025643 Chenopodium quinoa HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 73.0
Duzib192G0179 Durio zibethinus HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 75.7
Hma1.2p1_0517F.1_g170660 Hydrangea macrophylla HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 75.7
Hma1.2p1_0517F.1_g170670 Hydrangea macrophylla HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 75.7
Nitab4.5_0002661g0120 Nicotiana tabacum HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 75.7
Os04g0298200 Oryza sativa ssp. japonica HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 75.7
Peaxi162Scf00207g01631 Petunia axillaris HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 75.7
PGR102G1746 Punica granatum HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 75.7
Solyc06g063250.3 Solanum lycopersicum HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 75.7
Sopen06g022700 Solanum pennellii HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 75.7
PGSC0003DMG400026506 Solanum tuberosum HOM05D004748 ORTHO05D005825 1.1e-07 61.2 37 75.7
Actinidia31132 Actinidia chinensis HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 78.4
ClCG09G001570 Citrullus lanatus HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 75.7
CsaV3_7G033760 Cucumis sativus L. HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 75.7
DCAR_022622 Daucus carota HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 73.0
Migut.I01182 Erythranthe guttata HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 75.7
Gohir.A06G115900 Gossypium hirsutum HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 75.7
Gohir.D06G120700 Gossypium hirsutum HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 75.7
Gorai.010G141000 Gossypium raimondii HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 75.7
Lalb_Chr04g0264641 Lupinus albus HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 75.7
MD09G1160600 Malus domestica HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 75.7
MD17G1146400 Malus domestica HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 75.7
Hund18602 Selenicereus undatus HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 75.7
Thecc.06G061000 Theobroma cacao HOM05D004748 ORTHO05D005825 1.5e-07 60.8 37 75.7
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 1.5e-07 60.8 37 75.7
Ca_20497_v3 Cicer arietinum L. HOM05D004748 ORTHO05D005825 2.0e-07 60.5 37 75.7
Zm00001eb086340 Zea mays HOM05D004748 ORTHO05D005825 2.0e-07 60.5 37 73.0
CDE07G1729 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 2.6e-07 60.1 37 73.0
THA.LOC104816897 Tarenaya hassleriana HOM05D004748 ORTHO05D005825 2.6e-07 60.1 37 75.7
Zm00001eb420390 Zea mays HOM05D004748 ORTHO05D005825 2.6e-07 60.1 37 73.0
Ah.15g094390 Amaranthus hybridus HOM05D004748 ORTHO05D005825 3.3e-07 59.7 37 73.0
MSTRG.10889 Avicennia marina HOM05D004748 ORTHO05D005825 3.3e-07 59.7 37 75.7
COL.COLO4_31191 Corchorus olitorius HOM05D004748 ORTHO05D005825 3.3e-07 59.7 37 73.0
Aqoxy7G02343 Aquilegia oxysepala HOM05D004748 ORTHO05D005825 4.4e-07 59.3 37 73.0
FAN05G0392 Fragaria x ananassa HOM05D004748 ORTHO05D005825 4.4e-07 59.3 38 73.7
FAN05G2438 Fragaria x ananassa HOM05D004748 ORTHO05D005825 4.4e-07 59.3 38 73.7
MBI14_g10723_MAGBIO Magnolia biondii HOM05D004748 ORTHO05D005825 4.4e-07 59.3 37 73.0
Potri.010G251300 Populus trichocarpa HOM05D004748 ORTHO05D005825 4.4e-07 59.3 37 75.7
RcHm_v2.0_Chr2g0149771 Rosa chinensis HOM05D004748 ORTHO05D005825 4.4e-07 59.3 37 75.7
TAR625G1093 Trochodendron aralioides HOM05D004748 ORTHO05D005825 4.4e-07 59.3 37 73.0
Aa31LG10G3160 Aethionema arabicum HOM05D004748 ORTHO05D005825 5.7e-07 58.9 37 73.0
AagrBONN_evm.TU.Sc2ySwM_344.1578 Anthoceros agrestis HOM05D004748 ORTHO05D005825 5.7e-07 58.9 37 73.0
Ciclev10025586m.g Citrus clementina HOM05D004748 ORTHO05D005825 7.4e-07 58.5 38 76.3
Aqoxy1G00723 Aquilegia oxysepala HOM05D001476 ORTHO05D002681 9.7e-07 58.2 54 53.7
CDE04G0266 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 1.3e-06 57.8 37 70.3
FvH4_6g37160 Fragaria vesca HOM05D004748 ORTHO05D005825 1.3e-06 57.8 37 73.0
FAN09G1322 Fragaria x ananassa HOM05D004748 ORTHO05D005825 1.3e-06 57.8 37 73.0
FAN14G2305 Fragaria x ananassa HOM05D004748 ORTHO05D005825 1.3e-06 57.8 37 73.0
Mapoly0185s0006 Marchantia polymorpha HOM05D004748 ORTHO05D005825 1.3e-06 57.8 37 67.6
Sabra10G0195200 Salix brachista HOM05D004748 ORTHO05D005825 1.3e-06 57.8 37 73.0
AL1G59520 Arabidopsis lyrata HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
AT1G51610 Arabidopsis thaliana HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
arahy.Tifrunner.gnm1.ann1.2A2X48 Arachis hypogaea HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 73.0
arahy.Tifrunner.gnm1.ann1.660VQ8 Arachis hypogaea HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 73.0
BcaB02g11258 Brassica carinata HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
BcaB07g33612 Brassica carinata HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
BcaC08g43322 Brassica carinata HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
BcaC08g43922 Brassica carinata HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
A05p19500 Brassica napus HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
A06p02380 Brassica napus HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
C06p06730 Brassica napus HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
BolC6t35782H Brassica oleracea HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
BolC6t36471H Brassica oleracea HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
BraA05t20854Z Brassica rapa HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
BraA06t23445Z Brassica rapa HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
Carub.0001s4046 Capsella rubella HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
CARHR041760 Cardamine hirsuta HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
Thhalv10011469m.g Eutrema salsugineum HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
QL05p082110 Quercus lobata HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
Sp1g38250 Schrenkiella parvula HOM05D004748 ORTHO05D005825 1.7e-06 57.4 37 70.3
Nitab4.5_0001691g0140 Nicotiana tabacum HOM05D004748 ORTHO05D005825 3.7e-06 56.2 47 61.7
PSO017G2012 Papaver somniferum HOM05D004748 ORTHO05D005825 3.7e-06 56.2 37 67.6
PSO170G5564 Papaver somniferum HOM05D004748 ORTHO05D005825 3.7e-06 56.2 37 67.6
Pp3c20_1650 Physcomitrium patens HOM05D004748 ORTHO05D005825 8.2e-06 55.1 35 71.4
SHI31092 Sapria himalayana HOM05D004748 ORTHO05D005825 8.2e-06 55.1 35 74.3


User provided reference genes

Program Settings