Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11666 Sequoiadendron giganteum HOM05D002683 ORTHO05D007757 4.1e-107 391.3 192 100.0
Oeu053732.1 Olea europaea HOM05D002683 ORTHO05D007757 5.3e-30 135.2 111 58.6
CSS0049007 Camellia sinensis var. sinensis HOM05D002683 ORTHO05D007757 7.0e-30 134.8 87 70.1
PSO210G3019 Papaver somniferum HOM05D002683 ORTHO05D007757 9.1e-30 134.4 103 64.1
PSO761G0375 Papaver somniferum HOM05D002683 ORTHO05D007757 1.6e-29 133.7 87 71.3
Peaxi162Scf00357g00733 Petunia axillaris HOM05D002683 ORTHO05D007757 3.5e-29 132.5 95 63.2
Rhsim11G0097700 Rhododendron simsii HOM05D002683 ORTHO05D007757 3.5e-29 132.5 110 56.4
TAR633G1207 Trochodendron aralioides HOM05D002683 ORTHO05D007757 4.5e-29 132.1 87 69.0
CiPaw.07G031200 Carya illinoinensis HOM05D002683 ORTHO05D007757 5.9e-29 131.7 91 63.7
ClCG02G014790 Citrullus lanatus HOM05D002683 ORTHO05D007757 5.9e-29 131.7 91 65.9
Dinv30908 Davidia involucrata HOM05D002683 ORTHO05D007757 5.9e-29 131.7 80 75.0
MBI19_g03278_MAGBIO Magnolia biondii HOM05D002683 ORTHO05D007757 5.9e-29 131.7 91 67.0
Cpa.g.sc48.179 Carica papaya HOM05D002683 ORTHO05D007757 7.7e-29 131.3 87 70.1
AUR62006768 Chenopodium quinoa HOM05D002683 ORTHO05D007757 7.7e-29 131.3 76 78.9
Sed0002163 Sechium edule HOM05D002683 ORTHO05D007757 7.7e-29 131.3 95 64.2
AT1G09300 Arabidopsis thaliana HOM05D002683 ORTHO05D007757 1.0e-28 131.0 95 64.2
arahy.Tifrunner.gnm1.ann1.941PVT Arachis hypogaea HOM05D002683 ORTHO05D007757 1.3e-28 130.6 83 71.1
CsaV3_2G007210 Cucumis sativus L. HOM05D002683 ORTHO05D007757 1.3e-28 130.6 87 69.0
ECA234G1013 Erigeron canadensis HOM05D002683 ORTHO05D007757 1.3e-28 130.6 94 64.9
MELO3C004172.2 Cucumis melo HOM05D002683 ORTHO05D007757 1.7e-28 130.2 87 69.0
GSVIVG01031262001 Vitis vinifera HOM05D002683 ORTHO05D007757 1.7e-28 130.2 87 69.0
Haze_04041 Corylus avellana HOM05D002683 ORTHO05D007541 2.2e-28 129.8 91 64.8
Gohir.D13G115900 Gossypium hirsutum HOM05D002683 ORTHO05D007757 2.2e-28 129.8 101 61.4
Nitab4.5_0003044g0120 Nicotiana tabacum HOM05D002683 ORTHO05D007757 2.2e-28 129.8 91 63.7
Psat6g153200 Pisum sativum HOM05D002683 ORTHO05D007757 2.2e-28 129.8 83 69.9
Potri.013G007100 Populus trichocarpa HOM05D002683 ORTHO05D007757 2.2e-28 129.8 76 77.6
Thecc.05G325200 Theobroma cacao HOM05D002683 ORTHO05D007757 2.2e-28 129.8 91 67.0
ATR0693G361 Amborella trichopoda HOM05D002683 ORTHO05D007757 2.9e-28 129.4 95 62.1
Cfa006719 Carpinus fangiana HOM05D002683 ORTHO05D007541 2.9e-28 129.4 83 71.1
VMungo0720G2268 Vigna mungo HOM05D002683 ORTHO05D007757 2.9e-28 129.4 83 69.9
arahy.Tifrunner.gnm1.ann1.K5JNPB Arachis hypogaea HOM05D002683 ORTHO05D007757 3.8e-28 129.0 76 76.3
COL.COLO4_05532 Corchorus olitorius HOM05D002683 ORTHO05D007541 3.8e-28 129.0 91 65.9
Thhalv10007508m.g Eutrema salsugineum HOM05D002683 ORTHO05D007757 3.8e-28 129.0 100 61.0
Glyma.10G146000 Glycine max HOM05D002683 ORTHO05D007757 3.8e-28 129.0 87 65.5
Sabra13G0006000 Salix brachista HOM05D002683 ORTHO05D007757 5.0e-28 128.6 76 77.6
Duzib128G0271 Durio zibethinus HOM05D002683 ORTHO05D007757 6.5e-28 128.3 76 76.3
Glyma.20G095700 Glycine max HOM05D002683 ORTHO05D007757 6.5e-28 128.3 87 65.5
Gorai.013G130400 Gossypium raimondii HOM05D002683 ORTHO05D007757 6.5e-28 128.3 101 60.4
Nitab4.5_0003838g0050 Nicotiana tabacum HOM05D002683 ORTHO05D007757 6.5e-28 128.3 91 62.6
TPR.G2640 Trifolium pratense HOM05D002683 ORTHO05D007757 6.5e-28 128.3 83 68.7
vmacro01580 Vaccinium macrocarpon HOM05D002683 ORTHO05D007757 6.5e-28 128.3 76 75.0
Phvul.007G202700 Phaseolus vulgaris HOM05D002683 ORTHO05D007757 8.5e-28 127.9 76 75.0
Atru.BG.140.p Acer truncatum HOM05D002683 ORTHO05D007757 1.1e-27 127.5 83 68.7
Cc02_g35260 Coffea canephora HOM05D002683 ORTHO05D007757 1.1e-27 127.5 91 64.8
DCAR_005279 Daucus carota HOM05D002683 ORTHO05D007757 1.1e-27 127.5 83 69.9
Migut.B00939 Erythranthe guttata HOM05D002683 ORTHO05D007757 1.1e-27 127.5 91 63.7
Medtr1g084190 Medicago truncatula HOM05D002683 ORTHO05D007757 1.1e-27 127.5 83 68.7
Actinidia16874 Actinidia chinensis HOM05D002683 ORTHO05D007757 1.5e-27 127.1 106 55.7
BcaB03g13283 Brassica carinata HOM05D002683 ORTHO05D007757 1.5e-27 127.1 90 65.6
Gohir.A13G112900 Gossypium hirsutum HOM05D002683 ORTHO05D007757 1.5e-27 127.1 101 59.4
Manes.09G178200 Manihot esculenta HOM05D002683 ORTHO05D007757 1.5e-27 127.1 76 73.7
AUR62000422 Chenopodium quinoa HOM05D002683 ORTHO05D007757 2.5e-27 126.3 76 75.0
Lsat_1_v5_gn_5_148721 Lactuca sativa HOM05D002683 ORTHO05D007757 2.5e-27 126.3 86 64.0
SalBow7G3902 Salvia bowleyana HOM05D002683 ORTHO05D007757 2.5e-27 126.3 94 63.8
Ah.06g196180 Amaranthus hybridus HOM05D002683 ORTHO05D007757 3.2e-27 125.9 76 72.4
Eucgr.B01688 Eucalyptus grandis HOM05D002683 ORTHO05D007757 3.2e-27 125.9 87 65.5
Eucgr.L00254 Eucalyptus grandis HOM05D002683 ORTHO05D007757 3.2e-27 125.9 87 65.5
HanXRQChr04g0110421 Helianthus annuus HOM05D002683 ORTHO05D007757 3.2e-27 125.9 94 62.8
AL1G19790 Arabidopsis lyrata HOM05D002683 ORTHO05D007757 4.2e-27 125.6 90 64.4
Ciclev10000978m.g Citrus clementina HOM05D002683 ORTHO05D007757 4.2e-27 125.6 81 67.9
Lalb_Chr06g0167431 Lupinus albus HOM05D002683 ORTHO05D007757 4.2e-27 125.6 83 68.7
Sc16g0009160 Simmondsia chinensis HOM05D002683 ORTHO05D007757 4.2e-27 125.6 76 73.7
TWI56G0626 Tripterygium wilfordii HOM05D002683 ORTHO05D007757 4.2e-27 125.6 76 75.0
unitig_899.g14747 Utricularia gibba HOM05D002683 ORTHO05D007757 4.2e-27 125.6 83 68.7
Nn3g21801 Nelumbo nucifera HOM05D002683 ORTHO05D007757 5.5e-27 125.2 80 73.8
Hund07304 Selenicereus undatus HOM05D002683 ORTHO05D007757 5.5e-27 125.2 76 76.3
Aa31LG1G5830 Aethionema arabicum HOM05D002683 ORTHO05D007757 7.2e-27 124.8 95 60.0
CAN.G1076.36 Capsicum annuum HOM05D002683 ORTHO05D007757 7.2e-27 124.8 76 73.7
CARHR009270 Cardamine hirsuta HOM05D002683 ORTHO05D007757 7.2e-27 124.8 90 63.3
SGA_v2.0_scaffold4G01974 Striga asiatica HOM05D002683 ORTHO05D007757 7.2e-27 124.8 102 57.8
Lj5g0023373 Lotus japonicus HOM05D002683 ORTHO05D007757 9.4e-27 124.4 83 68.7
Solyc01g100740.4 Solanum lycopersicum HOM05D002683 ORTHO05D007757 9.4e-27 124.4 76 72.4
Sopen01g044240 Solanum pennellii HOM05D002683 ORTHO05D007757 9.4e-27 124.4 76 72.4
PGSC0003DMG400002792 Solanum tuberosum HOM05D002683 ORTHO05D007757 9.4e-27 124.4 76 72.4
EL10Ac4g09493 Beta vulgaris HOM05D002683 ORTHO05D007757 1.2e-26 124.0 74 74.3
BcaC07g38490 Brassica carinata HOM05D002683 ORTHO05D007757 1.2e-26 124.0 90 63.3
C08p12600 Brassica napus HOM05D002683 ORTHO05D007757 1.2e-26 124.0 90 63.3
BolC8t48898H Brassica oleracea HOM05D002683 ORTHO05D007757 1.2e-26 124.0 90 63.3
BraA08t35381Z Brassica rapa HOM05D002683 ORTHO05D007757 1.2e-26 124.0 90 63.3
Carub.0001s0864 Capsella rubella HOM05D002683 ORTHO05D007757 1.2e-26 124.0 88 64.8
A08p34690 Brassica napus HOM05D002683 ORTHO05D007757 1.6e-26 123.6 90 63.3
Zm00001eb028570 Zea mays HOM05D002683 ORTHO05D007757 1.6e-26 123.6 95 60.0
MSTRG.20371 Avicennia marina HOM05D002683 ORTHO05D007757 2.1e-26 123.2 91 62.6
THA.LOC104820580 Tarenaya hassleriana HOM05D002683 ORTHO05D007757 2.1e-26 123.2 87 66.7
PGR083G0299 Punica granatum HOM05D002683 ORTHO05D007757 2.7e-26 122.9 87 65.5
unitig_42.g32306 Utricularia gibba HOM05D002683 ORTHO05D007757 2.7e-26 122.9 82 68.3
Prupe.6G310400 Prunus persica HOM05D002683 ORTHO05D007757 3.6e-26 122.5 76 72.4
QL03p016490 Quercus lobata HOM05D002683 ORTHO05D007757 3.6e-26 122.5 94 61.7
QL03p016219 Quercus lobata HOM05D002683 ORTHO05D007757 4.7e-26 122.1 94 61.7
Sed0019928 Sechium edule HOM05D002683 ORTHO05D007757 6.1e-26 121.7 92 62.0
Sp1g07910 Schrenkiella parvula HOM05D002683 ORTHO05D007757 8.0e-26 121.3 90 61.1
Aqoxy2G02654 Aquilegia oxysepala HOM05D002683 ORTHO05D007757 1.8e-25 120.2 83 67.5
Os12g0563500 Oryza sativa ssp. japonica HOM05D002683 ORTHO05D007757 4.0e-25 119.0 85 65.9
FvH4_6g07800 Fragaria vesca HOM05D002683 ORTHO05D007757 5.2e-25 118.6 94 58.5
FAN02G1899 Fragaria x ananassa HOM05D002683 ORTHO05D007757 5.2e-25 118.6 94 58.5
FAN05G3891 Fragaria x ananassa HOM05D002683 ORTHO05D007757 5.2e-25 118.6 94 58.5
FAN09G2929 Fragaria x ananassa HOM05D002683 ORTHO05D007757 5.2e-25 118.6 83 63.9
FAN14G1324 Fragaria x ananassa HOM05D002683 ORTHO05D007757 5.2e-25 118.6 94 58.5
RcHm_v2.0_Chr3g0457511 Rosa chinensis HOM05D002683 ORTHO05D007757 1.5e-24 117.1 95 56.8
Rhsim07G0241000 Rhododendron simsii HOM05D002683 ORTHO05D007757 2.0e-24 116.7 79 67.1
Mapoly0027s0075 Marchantia polymorpha HOM05D002683 ORTHO05D007757 1.3e-23 114.0 87 59.8
HPP92_010879 Vanilla planifolia HOM05D002683 ORTHO05D007757 1.3e-23 114.0 82 62.2
AagrBONN_evm.TU.Sc2ySwM_117.3324 Anthoceros agrestis HOM05D002683 ORTHO05D007757 2.0e-21 106.7 87 57.5
SMO119G0363 Selaginella moellendorffii HOM05D002683 ORTHO05D007757 2.0e-21 106.7 87 52.9
Ca_10183_v3 Cicer arietinum L. HOM05D002683 ORTHO05D007757 4.5e-21 105.5 65 70.8
Pp3c12_9660 Physcomitrium patens HOM05D002683 ORTHO05D007757 7.2e-19 98.2 93 50.5
Lj5A325T77 Lonicera japonica HOM05D002683 ORTHO05D007757 3.1e-14 82.8 87 49.4
Duzib177G1111 Durio zibethinus HOM05D002683 ORTHO05D007757 1.9e-11 73.6 65 55.4
Cre01.g046150 Chlamydomonas reinhardtii HOM05D002683 ORTHO05D007757 3.6e-10 69.3 67 44.8


User provided reference genes

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