Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11629 Sequoiadendron giganteum HOM05D004493 ORTHO05D005117 3.9e-105 384.8 191 100.0
MBI04_g11451_MAGBIO Magnolia biondii HOM05D004493 ORTHO05D005117 7.9e-26 121.3 142 41.5
Mapoly0022s0121 Marchantia polymorpha HOM05D004493 ORTHO05D005117 1.8e-25 120.2 133 44.4
ATR0068G024 Amborella trichopoda HOM05D004493 ORTHO05D005117 4.8e-23 112.1 130 43.8
CDE02G2692 Ceratophyllum demersum HOM05D004493 ORTHO05D005117 4.8e-23 112.1 136 41.9
TAR623G0338 Trochodendron aralioides HOM05D004493 ORTHO05D005117 3.1e-22 109.4 154 37.0
Dinv06245 Davidia involucrata HOM05D004493 ORTHO05D005117 9.1e-22 107.8 127 44.1
Dinv15519 Davidia involucrata HOM05D004493 ORTHO05D005117 9.1e-22 107.8 127 44.1
Cfa009530 Carpinus fangiana HOM05D004493 ORTHO05D005117 2.0e-21 106.7 183 32.2
Nn7g36938 Nelumbo nucifera HOM05D004493 ORTHO05D005117 2.6e-21 106.3 136 41.9
Oeu023963.1 Olea europaea HOM05D004493 ORTHO05D005117 5.9e-21 105.1 152 38.8
Hund05058 Selenicereus undatus HOM05D004493 ORTHO05D005117 7.7e-21 104.8 133 43.6
CAN.G215.14 Capsicum annuum HOM05D004493 ORTHO05D005117 1.0e-20 104.4 154 37.7
Migut.N00529 Erythranthe guttata HOM05D004493 ORTHO05D005117 1.3e-20 104.0 157 38.2
Solyc02g032490.3 Solanum lycopersicum HOM05D004493 ORTHO05D005117 1.3e-20 104.0 129 41.1
Sopen02g010770 Solanum pennellii HOM05D004493 ORTHO05D005117 1.3e-20 104.0 129 42.6
MD11G1001000 Malus domestica HOM05D004493 ORTHO05D005117 1.7e-20 103.6 137 41.6
Rhsim13G0209100 Rhododendron simsii HOM05D004493 ORTHO05D005117 1.5e-19 100.5 127 39.4
Lsat_1_v5_gn_1_71321 Lactuca sativa HOM05D004493 ORTHO05D005117 2.5e-19 99.8 146 37.7
Haze_22920 Corylus avellana HOM05D004493 ORTHO05D005117 3.2e-19 99.4 183 32.2
CSS0040729 Camellia sinensis var. sinensis HOM05D004493 ORTHO05D005117 1.2e-18 97.4 125 39.2
Hma1.2p1_0589F.1_g184760 Hydrangea macrophylla HOM05D004493 ORTHO05D005117 1.6e-18 97.1 133 36.8
PSO384G0423 Papaver somniferum HOM05D004493 ORTHO05D005117 1.6e-18 97.1 127 37.0
Prupe.6G001200 Prunus persica HOM05D004493 ORTHO05D005117 1.6e-18 97.1 151 35.1
COL.COLO4_35067 Corchorus olitorius HOM05D004493 ORTHO05D005117 2.7e-18 96.3 129 38.8
THA.LOC104822690 Tarenaya hassleriana HOM05D004493 ORTHO05D005117 2.7e-18 96.3 137 39.4
Aqoxy1G00107 Aquilegia oxysepala HOM05D004493 ORTHO05D005117 3.6e-18 95.9 151 35.1
AUR62020345 Chenopodium quinoa HOM05D004493 ORTHO05D005117 3.6e-18 95.9 140 38.6
Lj5g0011313 Lotus japonicus HOM05D004493 ORTHO05D005117 6.1e-18 95.1 128 42.2
PGR119G2408 Punica granatum HOM05D004493 ORTHO05D005117 6.1e-18 95.1 132 39.4
GSVIVG01025508001 Vitis vinifera HOM05D004493 ORTHO05D005117 6.1e-18 95.1 152 35.5
Actinidia00919 Actinidia chinensis HOM05D004493 ORTHO05D005117 1.0e-17 94.4 136 36.0
Glyma.18G007300 Glycine max HOM05D004493 ORTHO05D005117 1.0e-17 94.4 124 41.9
Thecc.09G205800 Theobroma cacao HOM05D004493 ORTHO05D005117 1.0e-17 94.4 129 40.3
MSTRG.12812 Avicennia marina HOM05D004493 ORTHO05D005117 1.8e-17 93.6 125 41.6
Nitab4.5_0000075g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 1.8e-17 93.6 148 33.1
AagrBONN_evm.TU.Sc2ySwM_117.2650 Anthoceros agrestis HOM05D004493 ORTHO05D005117 2.3e-17 93.2 131 42.7
Rhsim10G0100200 Rhododendron simsii HOM05D004493 ORTHO05D005117 2.3e-17 93.2 127 37.0
Sed0013310 Sechium edule HOM05D004493 ORTHO05D005117 2.3e-17 93.2 126 40.5
unitig_0.g1239 Utricularia gibba HOM05D004493 ORTHO05D005117 2.3e-17 93.2 156 34.0
ECA248G0177 Erigeron canadensis HOM05D004493 ORTHO05D000562 3.0e-17 92.8 158 39.2
Glyma.06G239100 Glycine max HOM05D004493 ORTHO05D005117 3.0e-17 92.8 124 41.9
Nitab4.5_0000890g0180 Nicotiana tabacum HOM05D004493 ORTHO05D005117 5.2e-17 92.0 129 37.2
Cc01_g00330 Coffea canephora HOM05D004493 ORTHO05D005117 6.7e-17 91.7 132 38.6
SalBow3G2955 Salvia bowleyana HOM05D004493 ORTHO05D005117 6.7e-17 91.7 142 39.4
Duzib168G1306 Durio zibethinus HOM05D004493 ORTHO05D005117 8.8e-17 91.3 130 42.3
CsaV3_5G029430 Cucumis sativus L. HOM05D004493 ORTHO05D005117 1.2e-16 90.9 126 39.7
Manes.15G110800 Manihot esculenta HOM05D004493 ORTHO05D005117 1.2e-16 90.9 151 36.4
CANSAT11G1563 Cannabis sativa HOM05D004493 ORTHO05D005117 4.4e-16 89.0 180 30.6
RcHm_v2.0_Chr5g0084071 Rosa chinensis HOM05D004493 ORTHO05D005117 5.7e-16 88.6 135 37.0
VMungo0720G2527 Vigna mungo HOM05D004493 ORTHO05D005117 5.7e-16 88.6 126 38.1
CiPaw.13G180100 Carya illinoinensis HOM05D004493 ORTHO05D005117 7.5e-16 88.2 183 30.1
ClCG11G012960 Citrullus lanatus HOM05D004493 ORTHO05D005117 7.5e-16 88.2 126 39.7
MELO3C011789.2 Cucumis melo HOM05D004493 ORTHO05D005117 7.5e-16 88.2 126 38.1
Phvul.007G078700 Phaseolus vulgaris HOM05D004493 ORTHO05D005117 9.7e-16 87.8 126 40.5
HPP92_014371 Vanilla planifolia HOM05D004493 ORTHO05D005117 9.7e-16 87.8 128 39.1
EL10Ac4g07695 Beta vulgaris HOM05D004493 ORTHO05D005117 1.7e-15 87.0 124 37.9
arahy.Tifrunner.gnm1.ann1.578M4A Arachis hypogaea HOM05D004493 ORTHO05D005117 2.2e-15 86.7 125 38.4
arahy.Tifrunner.gnm1.ann1.M9LRNQ Arachis hypogaea HOM05D004493 ORTHO05D005117 2.2e-15 86.7 125 38.4
AUR62015878 Chenopodium quinoa HOM05D004493 ORTHO05D005117 2.2e-15 86.7 123 39.0
FAN16G3321 Fragaria x ananassa HOM05D004493 ORTHO05D005117 2.2e-15 86.7 128 36.7
Gohir.D08G092400 Gossypium hirsutum HOM05D004493 ORTHO05D005117 2.2e-15 86.7 130 38.5
Medtr1g069005 Medicago truncatula HOM05D004493 ORTHO05D005117 2.2e-15 86.7 129 38.0
AL1G63570 Arabidopsis lyrata HOM05D004493 ORTHO05D005117 2.8e-15 86.3 127 37.8
FAN21G4070 Fragaria x ananassa HOM05D004493 ORTHO05D005117 3.7e-15 85.9 128 35.9
Pp3c13_12950 Physcomitrium patens HOM05D004493 ORTHO05D005117 3.7e-15 85.9 153 35.3
FAN11G0901 Fragaria x ananassa HOM05D004493 ORTHO05D005117 4.8e-15 85.5 127 36.2
FAN11G3847 Fragaria x ananassa HOM05D004493 ORTHO05D005117 4.8e-15 85.5 127 36.2
AT1G55540 Arabidopsis thaliana HOM05D004493 ORTHO05D005117 8.2e-15 84.7 127 37.8
A08p00540 Brassica napus HOM05D004493 ORTHO05D005117 8.2e-15 84.7 124 36.3
Carub.0001s4405 Capsella rubella HOM05D004493 ORTHO05D005117 1.1e-14 84.3 127 39.4
FvH4_3g45960 Fragaria vesca HOM05D004493 ORTHO05D005117 1.1e-14 84.3 127 35.4
Psat6g065800 Pisum sativum HOM05D004493 ORTHO05D005117 1.1e-14 84.3 124 37.9
BraA08t32112Z Brassica rapa HOM05D004493 ORTHO05D005117 1.4e-14 84.0 128 36.7
Lalb_Chr13g0295751 Lupinus albus HOM05D004493 ORTHO05D005117 1.4e-14 84.0 124 37.9
Ah.06g182270 Amaranthus hybridus HOM05D004493 ORTHO05D005117 1.8e-14 83.6 137 34.3
TWI34G1214 Tripterygium wilfordii HOM05D004493 ORTHO05D005117 1.8e-14 83.6 130 36.2
DCAR_024091 Daucus carota HOM05D004493 ORTHO05D005117 2.4e-14 83.2 157 36.3
Aa31LG10G700 Aethionema arabicum HOM05D004493 ORTHO05D005117 4.1e-14 82.4 124 37.9
Cpa.g.sc119.15 Carica papaya HOM05D004493 ORTHO05D005117 7.0e-14 81.6 141 34.8
BcaNung06979 Brassica carinata HOM05D004493 ORTHO05D005117 9.1e-14 81.3 124 36.3
Ca_09617_v3 Cicer arietinum L. HOM05D004493 ORTHO05D005117 9.1e-14 81.3 120 36.7
FAN25G0645 Fragaria x ananassa HOM05D004493 ORTHO05D005117 1.2e-13 80.9 127 34.6
Eucgr.J01742 Eucalyptus grandis HOM05D004493 ORTHO05D005117 1.6e-13 80.5 152 34.9
Sp1g41160 Schrenkiella parvula HOM05D004493 ORTHO05D005117 2.0e-13 80.1 124 36.3
TPR.G22583 Trifolium pratense HOM05D004493 ORTHO05D005117 2.0e-13 80.1 128 36.7
Thhalv10011181m.g Eutrema salsugineum HOM05D004493 ORTHO05D005117 2.7e-13 79.7 133 39.8
QL01p007857 Quercus lobata HOM05D004493 ORTHO05D005117 3.5e-13 79.3 126 38.1
Potri.003G223400 Populus trichocarpa HOM05D004493 ORTHO05D005117 4.5e-13 79.0 159 34.0
CARHR045230 Cardamine hirsuta HOM05D004493 ORTHO05D005117 5.9e-13 78.6 124 37.1
Zm00001eb331030 Zea mays HOM05D004493 ORTHO05D005117 2.2e-12 76.6 138 31.9
SEGI_32023 Sequoiadendron giganteum HOM05D003599 ORTHO05D004221 5.0e-12 75.5 56 62.5
Ciclev10014017m.g Citrus clementina HOM05D004493 ORTHO05D005117 7.2e-11 71.6 182 31.3
Sabra03G0166000 Salix brachista HOM05D004493 ORTHO05D005117 4.7e-10 68.9 132 35.6
BcaC01g01535 Brassica carinata HOM05D004493 ORTHO05D005117 1.8e-09 67.0 124 31.5
C03p92870 Brassica napus HOM05D004493 ORTHO05D005117 1.8e-09 67.0 124 31.5
BolC3t21593H Brassica oleracea HOM05D004493 ORTHO05D005117 3.0e-09 66.2 124 31.5
SMO167G0064 Selaginella moellendorffii HOM05D004493 ORTHO05D005117 1.5e-08 63.9 121 37.2
SEGI_34079 Sequoiadendron giganteum HOM05D005948 ORTHO05D007689 7.5e-08 61.6 41 63.4
SEGI_21793 Sequoiadendron giganteum HOM05D001061 ORTHO05D007103 1.7e-07 60.5 47 61.7
Peaxi162Scf00186g01613 Petunia axillaris HOM05D004493 ORTHO05D005117 3.1e-06 56.2 67 43.3


User provided reference genes

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