Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 0.0e+00 1307.7 642 100.0
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 1.3e-101 374.8 464 45.0
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 8.1e-99 365.5 444 45.0
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 1.1e-98 365.2 431 44.3
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 1.8e-98 364.4 445 45.4
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 1.2e-97 361.7 452 44.7
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 2.6e-97 360.5 445 43.4
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 1.7e-96 357.8 485 43.3
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 4.2e-95 353.2 454 43.0
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 9.3e-95 352.1 470 41.3
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 1.6e-94 351.3 584 37.7
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 1.4e-90 338.2 590 37.3
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 1.8e-90 337.8 448 42.2
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 2.6e-89 334.0 495 39.6
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 2.6e-89 334.0 411 45.0
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 7.6e-89 332.4 456 42.5
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 3.8e-88 330.1 459 40.7
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 4.9e-88 329.7 468 41.0
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 6.5e-88 329.3 447 41.2
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 5.5e-87 326.2 448 43.1
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 1.2e-86 325.1 443 42.7
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 3.0e-85 320.5 486 39.5
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 8.7e-85 318.9 436 40.8
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 2.5e-84 317.4 451 39.7
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 2.5e-84 317.4 458 40.8
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 2.5e-84 317.4 493 38.5
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 3.3e-84 317.0 451 39.7
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 4.3e-84 316.6 441 41.5
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 9.7e-84 315.5 447 41.4
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 9.7e-84 315.5 442 41.2
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 1.3e-83 315.1 451 39.7
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 1.3e-83 315.1 441 41.3
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 1.3e-83 315.1 438 40.2
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 1.6e-83 314.7 563 36.4
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 3.7e-83 313.5 435 37.5
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 4.8e-83 313.2 451 40.4
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 8.2e-83 312.4 441 41.0
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 6.9e-82 309.3 443 40.2
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 1.2e-81 308.5 474 39.0
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 1.2e-81 308.5 474 39.0
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 1.5e-81 308.1 441 41.5
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 1.5e-81 308.1 432 38.0
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 3.4e-81 307.0 452 38.9
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 7.6e-81 305.8 440 40.2
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 1.7e-80 304.7 437 40.0
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 1.7e-80 304.7 551 36.1
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 2.2e-80 304.3 470 38.3
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 2.2e-80 304.3 460 38.9
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 2.9e-80 303.9 467 37.7
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 3.8e-80 303.5 418 42.8
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 8.5e-80 302.4 576 35.2
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 8.5e-80 302.4 446 40.8
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 1.1e-79 302.0 577 33.6
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 1.1e-79 302.0 470 36.6
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 1.4e-79 301.6 437 39.6
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 1.4e-79 301.6 449 40.5
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 5.5e-79 299.7 440 39.3
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 7.2e-79 299.3 599 33.7
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 1.6e-78 298.1 474 38.8
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 2.1e-78 297.7 576 34.2
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 7.9e-78 295.8 438 40.0
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 3.9e-77 293.5 450 38.9
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 6.7e-77 292.7 438 39.7
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 8.8e-77 292.4 567 34.2
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 8.8e-77 292.4 575 34.6
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 1.1e-76 292.0 453 38.0
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 1.9e-76 291.2 438 38.8
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 5.7e-76 289.7 446 39.2
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 1.3e-75 288.5 457 37.6
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 3.7e-75 287.0 483 36.9
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 4.8e-75 286.6 481 36.8
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 3.1e-74 283.9 477 34.2
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 3.4e-73 280.4 444 39.0
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 4.5e-73 280.0 373 42.4
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 1.3e-72 278.5 389 41.9
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 1.9e-71 274.6 467 36.2
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 1.6e-70 271.6 442 37.3
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 6.7e-69 266.2 439 37.6
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 1.5e-68 265.0 444 37.8
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 7.4e-68 262.7 509 33.2
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 2.2e-67 261.2 442 37.1
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 2.8e-67 260.8 401 38.7
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 2.9e-64 250.8 472 33.9
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 1.4e-53 215.3 440 34.5
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 1.2e-52 212.2 440 31.8
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 1.2e-49 202.2 436 31.2
AagrBONN_evm.TU.Sc2ySwM_344.3780 Anthoceros agrestis HOM05D007228 ORTHO05D009099 8.5e-48 196.1 252 43.3
SEGI_40191 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 1.6e-46 191.8 111 83.8
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 2.1e-46 191.4 363 33.9
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 3.6e-46 190.7 363 33.9
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 8.0e-38 162.9 344 31.7
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 2.3e-37 161.4 441 29.7
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 8.9e-37 159.5 525 28.2
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 4.9e-35 153.7 553 27.7
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 2.7e-33 147.9 211 44.1
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 5.9e-33 146.7 217 38.2
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 3.0e-29 134.4 207 37.7
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 6.8e-29 133.3 358 29.6
Lalb_Chr12g0202651 Lupinus albus HOM05D007228 ORTHO05D009099 1.1e-26 125.9 195 35.4
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 9.2e-26 122.9 292 30.5
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 2.7e-25 121.3 206 35.9
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 3.9e-24 117.5 336 28.6
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 6.6e-24 116.7 359 29.2
Psat0s5010g0080 Pisum sativum HOM05D005021 ORTHO05D006824 3.6e-22 110.9 214 36.4
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 9.5e-15 86.3 220 29.5
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 6.2e-14 83.6 118 35.6
SEGI_18600 Sequoiadendron giganteum HOM05D000002 ORTHO05D386236 1.0e-08 66.2 46 65.2
CDE02G0692 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 3.6e-06 57.8 97 35.1


User provided reference genes

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