Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 9.6e-214 746.5 363 100.0
SEGI_20433 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.0e-162 577.0 279 100.0
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 8.8e-58 228.4 376 39.6
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 2.8e-56 223.4 385 39.5
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 4.8e-56 222.6 369 39.6
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 6.3e-56 222.2 371 39.4
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 1.8e-55 220.7 368 39.7
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 9.1e-55 218.4 378 38.9
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 2.9e-53 213.4 377 39.0
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 4.2e-52 209.5 362 40.3
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 7.2e-52 208.8 346 39.9
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 9.4e-52 208.4 363 38.3
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 1.2e-51 208.0 377 38.7
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 2.7e-51 206.8 391 38.4
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 4.7e-51 206.1 356 38.8
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 6.1e-51 205.7 372 38.2
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 2.3e-50 203.8 348 38.8
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 6.7e-50 202.2 374 37.2
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 2.6e-49 200.3 364 36.5
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 3.3e-49 199.9 365 38.4
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 2.8e-48 196.8 347 40.3
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 4.8e-48 196.1 356 36.5
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 6.3e-48 195.7 360 38.6
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 1.4e-47 194.5 351 37.0
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 1.8e-47 194.1 353 38.0
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 3.1e-47 193.4 372 36.6
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 3.5e-46 189.9 359 38.2
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 4.5e-46 189.5 382 34.0
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 4.5e-46 189.5 381 36.2
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 7.7e-46 188.7 356 38.2
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 1.7e-45 187.6 357 38.7
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 2.2e-45 187.2 353 36.3
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 8.5e-45 185.3 393 35.6
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 1.1e-44 184.9 351 35.3
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 1.5e-44 184.5 372 37.1
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 2.5e-44 183.7 351 35.0
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 3.2e-44 183.3 373 35.4
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 3.2e-44 183.3 361 35.5
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 5.5e-44 182.6 354 35.9
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 7.2e-44 182.2 354 35.9
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 9.4e-44 181.8 347 34.6
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 9.4e-44 181.8 354 35.9
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 1.6e-43 181.0 444 33.1
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 2.1e-43 180.6 351 37.0
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 2.7e-43 180.3 371 35.0
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 2.7e-43 180.3 376 37.0
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.8e-42 177.6 365 35.6
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 1.8e-42 177.6 362 35.9
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 1.8e-42 177.6 380 34.2
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 2.3e-42 177.2 357 34.2
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 5.2e-42 176.0 352 37.2
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 5.2e-42 176.0 103 86.4
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 8.8e-42 175.3 390 34.4
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 1.2e-41 174.9 370 35.9
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 2.0e-41 174.1 355 34.1
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 4.4e-41 172.9 365 35.3
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 5.7e-41 172.6 347 34.3
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 1.3e-40 171.4 352 33.8
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 1.3e-40 171.4 359 35.7
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 2.2e-40 170.6 356 33.4
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 2.8e-40 170.2 368 34.8
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 2.4e-39 167.2 347 32.9
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 5.3e-39 166.0 339 36.3
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 1.2e-38 164.9 361 35.5
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 2.0e-38 164.1 353 34.0
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 3.5e-38 163.3 349 32.1
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 1.0e-37 161.8 388 31.7
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 5.0e-37 159.5 347 33.1
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 5.0e-37 159.5 372 34.1
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 5.5e-36 156.0 356 33.1
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 9.4e-36 155.2 253 38.7
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 1.2e-35 154.8 366 32.5
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.3e-32 144.8 274 37.6
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 1.3e-32 144.8 387 32.3
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 1.7e-32 144.4 246 39.4
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 2.8e-32 143.7 216 40.3
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 6.3e-32 142.5 261 33.7
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 6.3e-32 142.5 179 45.3
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 4.1e-31 139.8 179 42.5
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 4.1e-31 139.8 218 39.0
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 2.3e-29 134.0 280 31.1
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 5.0e-29 132.9 358 32.4
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 1.5e-28 131.3 360 31.4
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 1.5e-28 131.3 176 39.8
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 1.9e-28 131.0 285 31.9
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.9e-28 131.0 198 36.4
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 3.3e-28 130.2 285 31.9
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 7.2e-28 129.0 245 36.7
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 2.1e-27 127.5 396 29.5
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 3.6e-27 126.7 196 38.8
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 4.7e-27 126.3 207 38.6
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 8.0e-27 125.6 322 31.7
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 1.0e-21 108.6 241 33.2
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.3e-16 91.7 153 37.9
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 6.4e-16 89.4 69 56.5
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 4.1e-15 86.7 76 47.4
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 2.0e-14 84.3 66 51.5
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 1.1e-12 78.6 75 46.7
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 1.8e-10 71.2 167 35.9
Sc02g0003960 Simmondsia chinensis HOM05D006715 ORTHO05D008345 6.4e-08 62.8 88 43.2
MCO04G092 Micromonas commoda HOM05D004492 ORTHO05D005602 6.0e-06 56.2 124 32.3


User provided reference genes

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