Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 3.1e-66 255.0 130 100.0
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 1.4e-50 203.0 125 81.6
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 4.1e-50 201.4 122 77.9
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 9.2e-50 200.3 131 74.8
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 5.9e-49 197.6 130 70.8
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 7.8e-49 197.2 130 73.8
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 1.7e-48 196.1 130 70.8
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 2.9e-48 195.3 131 71.8
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 2.9e-48 195.3 131 72.5
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 2.9e-48 195.3 116 76.7
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 3.9e-48 194.9 122 73.8
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 5.0e-48 194.5 131 72.5
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 6.6e-48 194.1 131 71.0
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 6.6e-48 194.1 131 71.0
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 6.6e-48 194.1 131 71.0
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.1e-47 193.4 131 71.0
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 1.5e-47 193.0 124 74.2
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 1.5e-47 193.0 133 72.2
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.5e-47 192.2 131 71.0
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.5e-47 192.2 130 70.0
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 2.5e-47 192.2 133 71.4
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 3.3e-47 191.8 123 74.0
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 3.3e-47 191.8 130 70.0
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 4.3e-47 191.4 132 72.0
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 4.3e-47 191.4 130 70.8
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 5.6e-47 191.0 129 72.9
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.6e-47 191.0 130 68.5
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.6e-47 191.0 130 68.5
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 5.6e-47 191.0 130 68.5
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 5.6e-47 191.0 130 70.8
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 7.3e-47 190.7 132 70.5
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 9.5e-47 190.3 125 71.2
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.2e-46 189.9 130 67.7
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.2e-46 189.9 130 69.2
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 1.6e-46 189.5 130 69.2
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 1.6e-46 189.5 133 68.4
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 2.8e-46 188.7 131 69.5
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 2.8e-46 188.7 130 68.5
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 2.8e-46 188.7 133 69.2
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 2.8e-46 188.7 124 75.0
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 3.6e-46 188.3 125 72.0
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 3.6e-46 188.3 130 67.7
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 3.6e-46 188.3 127 73.2
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 3.6e-46 188.3 130 70.8
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 4.7e-46 188.0 137 67.9
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 4.7e-46 188.0 134 70.1
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 6.1e-46 187.6 130 67.7
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 6.1e-46 187.6 130 67.7
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 8.0e-46 187.2 124 73.4
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 8.0e-46 187.2 124 71.8
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 8.0e-46 187.2 130 71.5
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 1.4e-45 186.4 133 67.7
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.4e-45 186.4 130 67.7
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 1.4e-45 186.4 124 72.6
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 1.4e-45 186.4 133 69.2
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.8e-45 186.0 131 67.2
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 1.8e-45 186.0 124 71.8
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 1.8e-45 186.0 145 66.2
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 1.8e-45 186.0 123 71.5
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.3e-45 185.7 130 70.8
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 2.3e-45 185.7 134 69.4
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 3.1e-45 185.3 121 69.4
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 3.1e-45 185.3 130 70.8
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 4.0e-45 184.9 124 73.4
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 4.0e-45 184.9 129 68.2
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 5.2e-45 184.5 124 73.4
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 5.2e-45 184.5 130 66.2
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 5.2e-45 184.5 130 66.2
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 6.8e-45 184.1 125 71.2
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 6.8e-45 184.1 130 69.2
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 8.9e-45 183.7 128 68.0
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.2e-44 183.3 130 66.9
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 1.5e-44 183.0 130 66.9
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 1.5e-44 183.0 123 68.3
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 1.5e-44 183.0 130 66.2
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 1.5e-44 183.0 122 70.5
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 1.5e-44 183.0 118 73.7
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 2.0e-44 182.6 126 70.6
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 2.0e-44 182.6 124 71.0
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 2.0e-44 182.6 125 72.8
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 2.6e-44 182.2 133 65.4
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 2.6e-44 182.2 132 70.5
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 4.4e-44 181.4 125 70.4
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 4.4e-44 181.4 132 65.2
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 5.8e-44 181.0 125 68.8
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 7.5e-44 180.6 129 64.3
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 1.3e-43 179.9 130 66.9
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 1.3e-43 179.9 128 68.0
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 1.3e-43 179.9 122 68.9
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 1.7e-43 179.5 132 67.4
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.2e-43 179.1 125 69.6
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 2.2e-43 179.1 109 77.1
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.9e-43 178.7 130 66.2
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 4.9e-43 177.9 126 69.0
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 4.9e-43 177.9 130 63.8
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 6.4e-43 177.6 128 68.0
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 6.4e-43 177.6 124 68.5
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 8.3e-43 177.2 124 69.4
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 1.1e-42 176.8 114 74.6
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 1.4e-42 176.4 127 65.4
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.9e-42 176.0 123 67.5
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 2.4e-42 175.6 128 66.4
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 5.4e-42 174.5 131 64.9
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 5.4e-42 174.5 130 64.6
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 5.4e-42 174.5 131 67.9
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 9.2e-42 173.7 129 65.1
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 9.2e-42 173.7 121 72.7
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 1.2e-41 173.3 129 65.1
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 1.2e-41 173.3 131 61.1
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.2e-41 173.3 130 63.8
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 1.6e-41 172.9 111 75.7
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.6e-41 172.9 130 63.8
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 1.6e-41 172.9 128 68.8
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 2.0e-41 172.6 130 63.1
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 2.7e-41 172.2 124 67.7
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 2.7e-41 172.2 130 63.8
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.7e-41 172.2 125 67.2
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 4.6e-41 171.4 117 68.4
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 4.6e-41 171.4 130 63.1
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 7.8e-41 170.6 136 61.8
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 7.8e-41 170.6 135 60.7
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 1.0e-40 170.2 129 62.8
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 1.3e-40 169.9 131 64.1
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 1.7e-40 169.5 134 61.2
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 3.0e-40 168.7 133 61.7
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 3.0e-40 168.7 130 63.8
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 3.9e-40 168.3 137 61.3
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.9e-40 168.3 128 62.5
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 5.0e-40 167.9 137 60.6
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 6.6e-40 167.5 137 60.6
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 6.6e-40 167.5 137 60.6
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 8.6e-40 167.2 137 60.6
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 8.6e-40 167.2 137 60.6
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 8.6e-40 167.2 129 61.2
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 1.5e-39 166.4 119 63.9
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 1.5e-39 166.4 119 63.9
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 1.5e-39 166.4 119 63.9
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 7.3e-39 164.1 117 64.1
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 9.5e-39 163.7 119 63.0
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 9.5e-39 163.7 119 63.0
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 1.2e-38 163.3 131 63.4
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 2.1e-38 162.5 116 69.0
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 6.2e-38 161.0 122 64.8
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 8.0e-38 160.6 116 62.9
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 2.3e-37 159.1 139 61.9
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 4.0e-37 158.3 129 62.0
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 5.2e-37 157.9 131 62.6
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 2.6e-36 155.6 91 81.3
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 1.7e-35 152.9 118 61.0
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 2.2e-35 152.5 77 97.4
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 2.4e-34 149.1 122 57.4
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 2.4e-26 122.5 78 75.6
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.7e-24 116.3 85 68.2
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 2.8e-22 109.0 67 74.6
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 1.4e-21 106.7 70 71.4
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 2.6e-20 102.4 74 62.2
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 3.8e-19 98.6 76 65.8
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.0e-16 90.5 60 71.7
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.0e-16 90.5 77 57.1
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 1.3e-16 90.1 56 78.6
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 4.4e-12 75.1 50 66.0
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 2.2e-11 72.8 55 63.6
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 8.4e-11 70.9 94 36.2
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 3.3e-07 58.9 58 55.2


User provided reference genes

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