Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11356 Sequoiadendron giganteum HOM05D034525 ORTHO05D011010 8.5e-48 193.4 99 100.0
SEGI_12679 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 4.4e-44 181.0 103 92.2
SEGI_06588 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 4.8e-43 177.6 103 90.3
SEGI_12786 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 4.8e-43 177.6 103 90.3
SEGI_03020 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 4.4e-36 154.5 106 73.6
SEGI_03961 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 2.0e-17 92.4 78 55.1
SEGI_38833 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 4.6e-17 91.3 75 54.7
SEGI_28617 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 6.0e-17 90.9 75 56.0
SEGI_05773 Sequoiadendron giganteum HOM05D000208 ORTHO05D011010 7.8e-17 90.5 86 51.2
SEGI_07870 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 1.0e-16 90.1 86 51.2
SEGI_23174 Sequoiadendron giganteum HOM05D000208 ORTHO05D011010 1.0e-16 90.1 86 51.2
SEGI_39254 Sequoiadendron giganteum HOM05D000208 ORTHO05D011010 1.0e-16 90.1 86 51.2
SEGI_15091 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 3.0e-16 88.6 92 48.9
SEGI_41241 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 3.0e-16 88.6 78 55.1
SEGI_27382 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 1.1e-13 80.1 77 50.6
SEGI_04527 Sequoiadendron giganteum HOM05D034525 ORTHO05D011010 6.8e-13 77.4 66 53.0
SEGI_27949 Sequoiadendron giganteum HOM05D034525 ORTHO05D011010 6.8e-13 77.4 66 53.0
Cc03_g03580 Coffea canephora HOM05D000208 ORTHO05D000130 1.1e-07 60.1 75 48.0
PSO210G2381 Papaver somniferum HOM05D000208 ORTHO05D000130 1.1e-07 60.1 58 55.2
Gohir.A13G108000 Gossypium hirsutum HOM05D000208 ORTHO05D000130 1.9e-07 59.3 98 36.7
SEGI_09777 Sequoiadendron giganteum HOM05D000208 ORTHO05D011010 1.9e-07 59.3 64 43.8
SEGI_38150 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 1.9e-07 59.3 64 43.8
Thecc.05G302200 Theobroma cacao HOM05D000208 ORTHO05D000130 1.9e-07 59.3 76 44.7
Gohir.D13G111000 Gossypium hirsutum HOM05D000208 ORTHO05D000130 3.3e-07 58.5 98 36.7
Gorai.013G124500 Gossypium raimondii HOM05D000208 ORTHO05D000130 3.3e-07 58.5 98 36.7
Cc02_g33780 Coffea canephora HOM05D000208 ORTHO05D000130 4.3e-07 58.2 67 50.7
Eucgr.H04499 Eucalyptus grandis HOM05D000208 ORTHO05D000130 4.3e-07 58.2 79 46.8
PGR004G0975 Punica granatum HOM05D000208 ORTHO05D000130 4.3e-07 58.2 69 44.9
SEGI_12124 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 4.3e-07 58.2 64 50.0
Medtr7g113410 Medicago truncatula HOM05D000208 ORTHO05D000130 5.6e-07 57.8 97 39.2
SEGI_33760 Sequoiadendron giganteum HOM05D000208 ORTHO05D000130 5.6e-07 57.8 75 45.3
PSO782G4425 Papaver somniferum HOM05D000208 ORTHO05D000130 7.3e-07 57.4 57 54.4
Duzib177G0498 Durio zibethinus HOM05D000208 ORTHO05D000130 9.5e-07 57.0 76 43.4
CiPaw.07G018600 Carya illinoinensis HOM05D000208 ORTHO05D000130 2.8e-06 55.5 98 38.8
Migut.N02072 Erythranthe guttata HOM05D000208 ORTHO05D000130 2.8e-06 55.5 77 41.6
Eucgr.H04496 Eucalyptus grandis HOM05D000208 ORTHO05D000130 2.8e-06 55.5 76 43.4
Aqoxy5G00490 Aquilegia oxysepala HOM05D000208 ORTHO05D000130 3.6e-06 55.1 78 42.3
MSTRG.16480 Avicennia marina HOM05D000208 ORTHO05D000130 3.6e-06 55.1 67 49.3
FvH4_6g06090 Fragaria vesca HOM05D000208 ORTHO05D000130 3.6e-06 55.1 76 43.4
FAN14G0358 Fragaria x ananassa HOM05D000208 ORTHO05D000130 3.6e-06 55.1 76 43.4
Lalb_Chr06g0167631 Lupinus albus HOM05D000208 ORTHO05D000130 4.7e-06 54.7 75 38.7
MELO3C004253.2 Cucumis melo HOM05D000208 ORTHO05D000130 6.2e-06 54.3 70 44.3
RcHm_v2.0_Chr3g0455111 Rosa chinensis HOM05D000208 ORTHO05D000130 6.2e-06 54.3 102 39.2
Ah.06g189440 Amaranthus hybridus HOM05D000208 ORTHO05D011010 8.1e-06 53.9 75 49.3
ECA234G0803 Erigeron canadensis HOM05D000208 ORTHO05D000130 8.1e-06 53.9 86 41.9
Migut.N02059 Erythranthe guttata HOM05D000208 ORTHO05D000130 8.1e-06 53.9 61 45.9
Prupe.6G324400 Prunus persica HOM05D000208 ORTHO05D000130 8.1e-06 53.9 76 43.4


User provided reference genes

Program Settings