Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11223 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 8.4e-61 236.9 123 100.0
SEGI_38420 Sequoiadendron giganteum HOM05D006693 ORTHO05D008092 8.4e-61 236.9 123 100.0
ATR0721G120 Amborella trichopoda HOM05D006693 ORTHO05D008092 1.1e-28 130.2 88 73.9
Peaxi162Scf00074g01720 Petunia axillaris HOM05D006693 ORTHO05D008092 4.6e-27 124.8 116 59.5
TAR629G1282 Trochodendron aralioides HOM05D006693 ORTHO05D008092 4.6e-27 124.8 88 70.5
MBI06_g33534_MAGBIO Magnolia biondii HOM05D006693 ORTHO05D008092 1.3e-26 123.2 87 72.4
Nn6g32458 Nelumbo nucifera HOM05D006693 ORTHO05D008092 5.1e-26 121.3 87 69.0
PSO063G3881 Papaver somniferum HOM05D006693 ORTHO05D008092 5.1e-26 121.3 86 70.9
PSO170G0731 Papaver somniferum HOM05D006693 ORTHO05D008092 5.1e-26 121.3 86 70.9
GSVIVG01019421001 Vitis vinifera HOM05D006693 ORTHO05D008092 1.9e-25 119.4 88 71.6
Potri.003G132900 Populus trichocarpa HOM05D006693 ORTHO05D008092 3.3e-25 118.6 87 67.8
Actinidia27362 Actinidia chinensis HOM05D006693 ORTHO05D008092 4.3e-25 118.2 86 67.4
Dinv38897 Davidia involucrata HOM05D006693 ORTHO05D008092 4.3e-25 118.2 87 69.0
MSTRG.11217 Avicennia marina HOM05D006693 ORTHO05D008092 5.7e-25 117.9 87 66.7
Sabra03G0095200 Salix brachista HOM05D006693 ORTHO05D008092 5.7e-25 117.9 87 67.8
Manes.02G016800 Manihot esculenta HOM05D006693 ORTHO05D008092 7.4e-25 117.5 87 67.8
THA.LOC104814738 Tarenaya hassleriana HOM05D006693 ORTHO05D008092 7.4e-25 117.5 92 66.3
Ah.12g051930 Amaranthus hybridus HOM05D006693 ORTHO05D008092 9.7e-25 117.1 86 64.0
Atru.chr9.2109 Acer truncatum HOM05D006693 ORTHO05D008092 1.3e-24 116.7 87 66.7
SalBow1G8229 Salvia bowleyana HOM05D006693 ORTHO05D008092 1.6e-24 116.3 95 61.1
Sed0010800 Sechium edule HOM05D006693 ORTHO05D008092 1.6e-24 116.3 88 65.9
SGA_v2.0_scaffold173G39133 Striga asiatica HOM05D006693 ORTHO05D008092 1.6e-24 116.3 95 62.1
EL10Ac5g12841 Beta vulgaris HOM05D006693 ORTHO05D008092 2.2e-24 115.9 86 62.8
COL.COLO4_08358 Corchorus olitorius HOM05D006693 ORTHO05D008092 2.2e-24 115.9 86 65.1
Hund14266 Selenicereus undatus HOM05D006693 ORTHO05D008092 2.8e-24 115.5 85 63.5
A09p27880 Brassica napus HOM05D006693 ORTHO05D008092 3.7e-24 115.2 87 69.0
BraA09t38356Z Brassica rapa HOM05D006693 ORTHO05D008092 3.7e-24 115.2 87 69.0
AUR62010757 Chenopodium quinoa HOM05D006693 ORTHO05D008092 3.7e-24 115.2 86 62.8
Solyc08g081640.3 Solanum lycopersicum HOM05D006693 ORTHO05D008092 3.7e-24 115.2 87 66.7
Sopen08g029940 Solanum pennellii HOM05D006693 ORTHO05D008092 3.7e-24 115.2 87 66.7
PGSC0003DMG400012182 Solanum tuberosum HOM05D006693 ORTHO05D008092 3.7e-24 115.2 87 66.7
Aqoxy5G04083 Aquilegia oxysepala HOM05D006693 ORTHO05D008092 1.1e-23 113.6 87 64.4
BcaC04g21124 Brassica carinata HOM05D006693 ORTHO05D008092 1.1e-23 113.6 87 67.8
C09p35290 Brassica napus HOM05D006693 ORTHO05D008092 1.1e-23 113.6 87 67.8
BolC9t56372H Brassica oleracea HOM05D006693 ORTHO05D008092 1.1e-23 113.6 87 67.8
Duzib205G0177 Durio zibethinus HOM05D006693 ORTHO05D008092 1.1e-23 113.6 86 65.1
Nitab4.5_0014092g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 1.1e-23 113.6 87 65.5
BcaB01g01624 Brassica carinata HOM05D006693 ORTHO05D008092 1.4e-23 113.2 87 66.7
Carub.0006s3015 Capsella rubella HOM05D006693 ORTHO05D008092 1.4e-23 113.2 87 66.7
ClCG07G007830 Citrullus lanatus HOM05D006693 ORTHO05D008092 1.4e-23 113.2 89 62.9
MELO3C016336.2 Cucumis melo HOM05D006693 ORTHO05D008092 1.4e-23 113.2 87 64.4
Zm00001eb382730 Zea mays HOM05D006693 ORTHO05D008092 1.4e-23 113.2 87 63.2
AUR62019758 Chenopodium quinoa HOM05D006693 ORTHO05D008092 1.8e-23 112.8 86 62.8
Lsat_1_v5_gn_6_84960 Lactuca sativa HOM05D006693 ORTHO05D008092 1.8e-23 112.8 87 63.2
Nitab4.5_0007163g0010 Nicotiana tabacum HOM05D006693 ORTHO05D008092 1.8e-23 112.8 87 64.4
Thecc.03G286900 Theobroma cacao HOM05D006693 ORTHO05D008092 1.8e-23 112.8 86 65.1
HanXRQChr03g0085981 Helianthus annuus HOM05D006693 ORTHO05D008092 2.4e-23 112.5 88 64.8
Actinidia33729 Actinidia chinensis HOM05D006693 ORTHO05D008092 3.1e-23 112.1 86 66.3
AL6G45650 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 3.1e-23 112.1 86 65.1
arahy.Tifrunner.gnm1.ann1.U3KDBF Arachis hypogaea HOM05D006693 ORTHO05D008092 3.1e-23 112.1 109 55.0
Cfa012249 Carpinus fangiana HOM05D006693 ORTHO05D008092 3.1e-23 112.1 87 64.4
Thhalv10028363m.g Eutrema salsugineum HOM05D006693 ORTHO05D008092 3.1e-23 112.1 87 66.7
Gohir.D03G078700 Gossypium hirsutum HOM05D006693 ORTHO05D008092 3.1e-23 112.1 86 65.1
Gorai.003G085400 Gossypium raimondii HOM05D006693 ORTHO05D008092 3.1e-23 112.1 86 65.1
Rhsim07G0087200 Rhododendron simsii HOM05D006693 ORTHO05D008092 4.1e-23 111.7 88 63.6
Sp6g06170 Schrenkiella parvula HOM05D006693 ORTHO05D008092 4.1e-23 111.7 87 65.5
Gohir.A02G105100 Gossypium hirsutum HOM05D006693 ORTHO05D008092 5.3e-23 111.3 86 65.1
Haze_08752 Corylus avellana HOM05D006693 ORTHO05D008092 6.9e-23 110.9 87 63.2
CsaV3_4G006130 Cucumis sativus L. HOM05D006693 ORTHO05D008092 6.9e-23 110.9 87 63.2
Lj4g0019588 Lotus japonicus HOM05D006693 ORTHO05D008092 6.9e-23 110.9 88 62.5
Phvul.002G293300 Phaseolus vulgaris HOM05D006693 ORTHO05D008092 6.9e-23 110.9 88 61.4
TPR.G12950 Trifolium pratense HOM05D006693 ORTHO05D008092 6.9e-23 110.9 88 61.4
Potri.001G098700 Populus trichocarpa HOM05D006693 ORTHO05D008092 9.0e-23 110.5 87 64.4
CiPaw.12G089000 Carya illinoinensis HOM05D006693 ORTHO05D008092 1.2e-22 110.2 87 62.1
Ca_10951_v3 Cicer arietinum L. HOM05D006693 ORTHO05D008092 1.2e-22 110.2 88 61.4
Migut.A00715 Erythranthe guttata HOM05D006693 ORTHO05D008092 1.2e-22 110.2 94 60.6
Lj2A178T45 Lonicera japonica HOM05D006693 ORTHO05D008092 1.2e-22 110.2 117 52.1
QL02p033351 Quercus lobata HOM05D006693 ORTHO05D008092 1.2e-22 110.2 87 63.2
CSS0002391 Camellia sinensis var. sinensis HOM05D006693 ORTHO05D008092 1.5e-22 109.8 87 65.5
ECA240G0689 Erigeron canadensis HOM05D006693 ORTHO05D008092 1.5e-22 109.8 88 62.5
PGR031G3028 Punica granatum HOM05D006693 ORTHO05D008092 1.5e-22 109.8 87 64.4
arahy.Tifrunner.gnm1.ann1.ILCZ5C Arachis hypogaea HOM05D006693 ORTHO05D008092 2.0e-22 109.4 109 53.2
vmacro13975 Vaccinium macrocarpon HOM05D006693 ORTHO05D008092 2.0e-22 109.4 87 63.2
Psat7g029760 Pisum sativum HOM05D006693 ORTHO05D008092 2.6e-22 109.0 88 60.2
Medtr8g098950 Medicago truncatula HOM05D006693 ORTHO05D008092 3.4e-22 108.6 88 60.2
Cc08_g15300 Coffea canephora HOM05D006693 ORTHO05D008092 5.9e-22 107.8 92 60.9
Lalb_Chr05g0224471 Lupinus albus HOM05D006693 ORTHO05D008092 5.9e-22 107.8 87 59.8
AT4G11270 Arabidopsis thaliana HOM05D006693 ORTHO05D008092 7.6e-22 107.5 87 63.2
Glyma.05G212000 Glycine max HOM05D006693 ORTHO05D008092 7.6e-22 107.5 88 61.4
Sc07g0009850 Simmondsia chinensis HOM05D006693 ORTHO05D008092 7.6e-22 107.5 86 60.5
Glyma.08G018400 Glycine max HOM05D006693 ORTHO05D008092 1.0e-21 107.1 88 61.4
CDE02G1190 Ceratophyllum demersum HOM05D006693 ORTHO05D008092 1.7e-21 106.3 86 62.8
Prupe.5G106900 Prunus persica HOM05D006693 ORTHO05D008092 1.7e-21 106.3 87 62.1
Ciclev10018484m.g Citrus clementina HOM05D006693 ORTHO05D008092 2.9e-21 105.5 86 61.6
Lalb_Chr16g0390281 Lupinus albus HOM05D006693 ORTHO05D008092 2.9e-21 105.5 87 60.9
DCAR_008351 Daucus carota HOM05D006693 ORTHO05D008092 5.0e-21 104.8 87 57.5
VMungo0251G0136 Vigna mungo HOM05D006693 ORTHO05D008092 5.0e-21 104.8 88 58.0
Eucgr.D01808 Eucalyptus grandis HOM05D006693 ORTHO05D008092 8.5e-21 104.0 87 59.8
MD06G1091700 Malus domestica HOM05D006693 ORTHO05D008092 1.9e-20 102.8 86 60.5
RcHm_v2.0_Chr7g0196531 Rosa chinensis HOM05D006693 ORTHO05D008092 1.9e-20 102.8 87 56.3
FAN04G0987 Fragaria x ananassa HOM05D006693 ORTHO05D008092 3.2e-20 102.1 87 56.3
FAN04G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 3.2e-20 102.1 87 56.3
HPP92_021742 Vanilla planifolia HOM05D006693 ORTHO05D008092 3.2e-20 102.1 87 59.8
FvH4_5g03240 Fragaria vesca HOM05D006693 ORTHO05D008092 7.2e-20 100.9 87 55.2
FAN18G3090 Fragaria x ananassa HOM05D006693 ORTHO05D008092 7.2e-20 100.9 87 55.2
AagrBONN_evm.TU.Sc2ySwM_368.1009 Anthoceros agrestis HOM05D006693 ORTHO05D008092 1.6e-19 99.8 123 46.3
Aa31LG9G10920 Aethionema arabicum HOM05D006693 ORTHO05D008092 5.1e-18 94.7 125 45.6
FAN13G0718 Fragaria x ananassa HOM05D006693 ORTHO05D008092 5.3e-15 84.7 92 51.1
SMO358G0585 Selaginella moellendorffii HOM05D006693 ORTHO05D008092 3.4e-14 82.0 90 52.2
AL6G45560 Arabidopsis lyrata HOM05D006693 ORTHO05D008092 5.1e-10 68.2 49 71.4
SEGI_29774 Sequoiadendron giganteum HOM05D004750 ORTHO05D006207 5.3e-07 58.2 33 87.9
SEGI_35696 Sequoiadendron giganteum HOM05D003704 ORTHO05D005892 9.1e-07 57.4 28 100.0
SEGI_24192 Sequoiadendron giganteum HOM05D000992 ORTHO05D006704 1.5e-06 56.6 40 70.0
SEGI_01067 Sequoiadendron giganteum HOM05D005316 ORTHO05D006495 2.0e-06 56.2 44 65.9
SEGI_35780 Sequoiadendron giganteum HOM05D002947 ORTHO05D003447 5.9e-06 54.7 37 73.0


User provided reference genes

Program Settings