Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 0.0e+00 1526.5 872 100.0
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 0.0e+00 1446.4 830 99.6
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 2.0e-63 248.4 716 34.9
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 8.0e-57 226.5 487 36.6
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 4.0e-56 224.2 305 45.2
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 4.0e-56 224.2 305 45.6
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 5.2e-56 223.8 433 39.0
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 1.5e-55 222.2 375 41.1
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 1.5e-55 222.2 302 45.7
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 7.5e-55 219.9 309 46.3
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 7.5e-55 219.9 433 38.8
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 1.3e-54 219.2 310 45.5
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 1.3e-54 219.2 335 46.0
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 2.2e-54 218.4 342 42.4
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 3.7e-54 217.6 350 44.9
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 4.9e-54 217.2 605 35.0
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 8.3e-54 216.5 671 32.9
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 1.1e-53 216.1 363 40.2
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 1.1e-53 216.1 694 31.1
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 1.1e-53 216.1 401 37.9
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 1.8e-53 215.3 647 33.8
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 3.1e-53 214.5 627 34.1
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 3.1e-53 214.5 346 43.1
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 3.1e-53 214.5 369 44.7
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 7.0e-53 213.4 362 40.1
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 7.0e-53 213.4 312 44.6
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 9.2e-53 213.0 302 44.0
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 9.2e-53 213.0 644 31.8
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 9.2e-53 213.0 707 30.1
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 1.2e-52 212.6 304 45.1
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 1.2e-52 212.6 652 33.7
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 1.6e-52 212.2 415 37.3
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 2.0e-52 211.8 372 40.3
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 2.7e-52 211.5 653 31.1
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 4.5e-52 210.7 394 38.1
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 5.9e-52 210.3 644 35.1
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 5.9e-52 210.3 339 42.5
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 7.8e-52 209.9 395 40.0
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 1.0e-51 209.5 723 31.0
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 1.3e-51 209.1 326 41.7
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 1.3e-51 209.1 397 37.5
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 1.7e-51 208.8 344 39.5
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.7e-51 208.8 595 33.3
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 1.7e-51 208.8 632 31.5
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 2.9e-51 208.0 655 33.3
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 3.9e-51 207.6 374 39.0
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 3.9e-51 207.6 388 38.1
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 5.0e-51 207.2 361 40.4
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 6.6e-51 206.8 613 31.5
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 1.5e-50 205.7 310 44.5
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 1.5e-50 205.7 652 31.9
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 1.9e-50 205.3 484 34.7
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 2.5e-50 204.9 636 31.3
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 2.5e-50 204.9 656 31.4
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 2.5e-50 204.9 373 40.5
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 3.3e-50 204.5 497 35.8
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 5.6e-50 203.8 610 31.0
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 5.6e-50 203.8 598 33.6
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 1.2e-49 202.6 634 32.8
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 1.6e-49 202.2 449 35.0
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 1.6e-49 202.2 361 39.1
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 2.1e-49 201.8 631 32.0
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 2.8e-49 201.4 603 33.0
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 4.7e-49 200.7 425 36.9
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 4.7e-49 200.7 362 40.1
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.8e-48 198.7 631 32.2
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 2.3e-48 198.4 405 36.3
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 4.0e-48 197.6 370 39.2
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 4.0e-48 197.6 645 33.0
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 5.2e-48 197.2 631 31.1
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 6.8e-48 196.8 308 41.9
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 6.8e-48 196.8 717 30.5
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 6.8e-48 196.8 596 31.4
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 1.2e-47 196.1 611 32.4
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.5e-47 195.7 606 32.3
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 2.0e-47 195.3 339 41.9
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 2.6e-47 194.9 372 39.5
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 3.4e-47 194.5 370 37.8
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 1.7e-46 192.2 669 31.8
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 3.7e-46 191.0 627 31.1
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 3.7e-46 191.0 644 30.7
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 4.9e-46 190.7 630 30.5
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 1.9e-45 188.7 611 31.3
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 3.2e-45 188.0 626 31.2
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 5.4e-45 187.2 630 33.0
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 1.6e-44 185.7 549 32.8
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 2.7e-44 184.9 608 32.9
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 3.5e-44 184.5 646 30.8
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 2.3e-43 181.8 374 35.0
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 3.9e-43 181.0 295 41.0
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 4.3e-42 177.6 423 34.8
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 2.1e-41 175.3 288 43.1
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 2.8e-41 174.9 624 30.0
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 8.0e-41 173.3 620 30.2
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 2.0e-39 168.7 381 36.5
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 9.8e-39 166.4 344 35.5
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 2.4e-37 161.8 583 31.2
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 2.3e-35 155.2 578 30.3
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 2.1e-28 132.1 262 40.1
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 1.3e-27 129.4 618 27.2
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 7.6e-23 113.6 133 48.1
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 1.7e-22 112.5 322 32.9
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 1.6e-20 105.9 157 43.3
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 1.1e-18 99.8 130 46.9
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 6.9e-08 63.9 243 28.4
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 4.9e-06 57.8 71 43.7


User provided reference genes

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