Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 1.3e-182 642.9 328 100.0
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 3.2e-51 206.5 295 44.1
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 5.5e-51 205.7 295 44.7
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 5.7e-48 195.7 297 44.1
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 4.8e-47 192.6 298 45.0
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 1.6e-45 187.6 298 40.9
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 7.7e-45 185.3 295 42.0
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 2.9e-44 183.3 301 41.2
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.0e-44 182.6 296 41.6
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 5.0e-44 182.6 295 39.7
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 6.5e-44 182.2 296 41.6
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 8.5e-44 181.8 294 41.2
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.1e-43 181.4 296 41.6
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 2.5e-43 180.3 291 40.2
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 2.5e-43 180.3 294 40.8
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 7.2e-43 178.7 295 40.0
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 1.6e-42 177.6 324 38.9
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 1.6e-42 177.6 290 40.7
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 1.6e-42 177.6 296 40.9
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 2.7e-42 176.8 296 38.5
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 4.7e-42 176.0 276 43.1
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 6.1e-42 175.6 290 39.0
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 6.1e-42 175.6 284 40.8
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 6.1e-42 175.6 276 43.1
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 6.1e-42 175.6 288 40.6
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 6.1e-42 175.6 297 41.1
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 6.1e-42 175.6 281 41.3
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 8.0e-42 175.3 295 40.3
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 8.0e-42 175.3 276 43.1
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 8.0e-42 175.3 295 42.4
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 1.0e-41 174.9 277 43.0
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 1.8e-41 174.1 304 42.1
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 2.3e-41 173.7 297 40.1
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 8.8e-41 171.8 297 39.4
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 1.2e-40 171.4 295 39.0
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 1.5e-40 171.0 287 40.1
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 2.6e-40 170.2 296 40.2
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 7.5e-40 168.7 273 41.8
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 1.3e-39 167.9 294 40.8
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 1.7e-39 167.5 284 41.2
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 2.8e-39 166.8 275 40.4
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 3.7e-39 166.4 296 40.2
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 1.1e-38 164.9 295 39.3
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 1.4e-38 164.5 283 41.3
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 1.4e-38 164.5 296 39.2
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 4.1e-38 162.9 279 39.8
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 1.6e-37 161.0 295 38.6
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 2.0e-37 160.6 300 38.3
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 2.7e-37 160.2 301 38.2
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.3e-36 157.9 297 39.1
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 1.7e-36 157.5 293 39.6
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 2.9e-36 156.8 290 39.3
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 8.5e-36 155.2 280 39.3
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 1.1e-35 154.8 291 35.7
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.1e-35 154.8 279 39.4
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.1e-35 154.8 279 39.4
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 1.1e-35 154.8 299 38.8
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 2.5e-35 153.7 247 43.7
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.5e-35 153.7 286 39.2
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 4.2e-35 152.9 279 38.7
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 5.5e-35 152.5 293 39.2
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 7.2e-35 152.1 294 38.4
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 1.6e-34 151.0 267 40.4
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 3.6e-34 149.8 283 37.1
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 4.7e-34 149.4 297 35.4
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 8.0e-34 148.7 300 36.3
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 3.0e-33 146.7 281 40.9
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 5.2e-33 146.0 295 36.3
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 5.2e-33 146.0 287 38.0
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 8.8e-33 145.2 292 37.3
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 3.4e-32 143.3 305 34.8
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 5.7e-32 142.5 95 74.7
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 7.5e-32 142.1 281 38.8
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 9.8e-32 141.7 296 37.2
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 2.8e-31 140.2 275 38.9
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 2.8e-31 140.2 275 38.9
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 2.8e-31 140.2 279 37.3
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 4.1e-30 136.3 299 34.8
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 3.5e-29 133.3 275 37.5
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 2.2e-28 130.6 208 43.8
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 3.8e-28 129.8 286 33.9
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 6.5e-28 129.0 276 35.1
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 4.2e-27 126.3 289 33.2
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 1.6e-26 124.4 226 38.1
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.4e-25 121.3 111 58.6
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 2.3e-25 120.6 327 30.9
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 6.8e-25 119.0 125 51.2
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 2.0e-24 117.5 291 35.1
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 2.6e-24 117.1 286 31.8
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 5.4e-22 109.4 108 53.7
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 5.4e-22 109.4 277 32.9
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 5.4e-22 109.4 282 32.6
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 7.0e-22 109.0 108 54.6
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 1.2e-21 108.2 277 32.5
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 1.2e-21 108.2 277 32.5
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 2.0e-21 107.5 120 47.5
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 3.5e-21 106.7 282 32.3
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 5.0e-20 102.8 153 43.8
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 8.6e-20 102.1 164 39.6
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 1.5e-19 101.3 278 32.4
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 1.5e-19 101.3 279 31.9
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 2.5e-19 100.5 153 43.1
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 5.6e-19 99.4 93 55.9
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 7.3e-19 99.0 277 31.4
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 2.1e-18 97.4 273 28.6
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 1.8e-17 94.4 99 52.5
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 1.8e-14 84.3 98 45.9
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 9.2e-14 82.0 278 28.1
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 4.9e-07 59.7 284 24.3


User provided reference genes

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