Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11145 Sequoiadendron giganteum HOM05D006997 ORTHO05D008713 1.3e-57 226.1 111 100.0
MBI02_g10710_MAGBIO Magnolia biondii HOM05D006997 ORTHO05D008713 5.6e-32 141.0 69 94.2
TWI56G0051 Tripterygium wilfordii HOM05D006997 ORTHO05D008713 1.6e-31 139.4 69 92.8
CANSAT54G2489 Cannabis sativa HOM05D006997 ORTHO05D008713 2.8e-31 138.7 69 92.8
Haze_18264 Corylus avellana HOM05D006997 ORTHO05D008713 2.8e-31 138.7 69 92.8
Nitab4.5_0005108g0030 Nicotiana tabacum HOM05D006997 ORTHO05D008713 2.8e-31 138.7 69 92.8
QL02p002364 Quercus lobata HOM05D006997 ORTHO05D008713 2.8e-31 138.7 69 92.8
Solyc04g074710.3 Solanum lycopersicum HOM05D006997 ORTHO05D008713 2.8e-31 138.7 69 92.8
Sopen04g029680 Solanum pennellii HOM05D006997 ORTHO05D008713 2.8e-31 138.7 69 92.8
PGSC0003DMG400030838 Solanum tuberosum HOM05D006997 ORTHO05D008713 2.8e-31 138.7 69 92.8
CsaV3_3G047700 Cucumis sativus L. HOM05D006997 ORTHO05D008713 3.7e-31 138.3 69 92.8
Migut.O00787 Erythranthe guttata HOM05D006997 ORTHO05D008713 3.7e-31 138.3 69 92.8
Hma1.2p1_1613F.1_g293656 Hydrangea macrophylla HOM05D006997 ORTHO05D008713 3.7e-31 138.3 69 89.9
Manes.02G149000 Manihot esculenta HOM05D006997 ORTHO05D008713 3.7e-31 138.3 69 92.8
PGR042G3947 Punica granatum HOM05D006997 ORTHO05D008713 3.7e-31 138.3 69 91.3
TAR381G0945 Trochodendron aralioides HOM05D006997 ORTHO05D008713 3.7e-31 138.3 69 92.8
CiPaw.15G045900 Carya illinoinensis HOM05D006997 ORTHO05D008713 4.8e-31 137.9 69 92.8
FvH4_5g36560 Fragaria vesca HOM05D006997 ORTHO05D008713 4.8e-31 137.9 69 92.8
FAN08G2563 Fragaria x ananassa HOM05D006997 ORTHO05D008713 4.8e-31 137.9 69 92.8
FAN13G2131 Fragaria x ananassa HOM05D006997 ORTHO05D008713 4.8e-31 137.9 69 92.8
FAN18G0565 Fragaria x ananassa HOM05D006997 ORTHO05D008713 4.8e-31 137.9 69 92.8
RcHm_v2.0_Chr3g0492071 Rosa chinensis HOM05D006997 ORTHO05D008713 4.8e-31 137.9 69 91.3
Aqoxy5G01920 Aquilegia oxysepala HOM05D006997 ORTHO05D008713 6.2e-31 137.5 69 92.8
Cpa.g.sc36.182 Carica papaya HOM05D006997 ORTHO05D008713 6.2e-31 137.5 69 91.3
ECA247G1028 Erigeron canadensis HOM05D006997 ORTHO05D008713 6.2e-31 137.5 69 91.3
HanXRQChr02g0039281 Helianthus annuus HOM05D006997 ORTHO05D008713 6.2e-31 137.5 69 91.3
Potri.002G100700 Populus trichocarpa HOM05D006997 ORTHO05D008713 6.2e-31 137.5 69 91.3
vmacro21291 Vaccinium macrocarpon HOM05D006997 ORTHO05D008713 6.2e-31 137.5 69 91.3
MELO3C003553.2 Cucumis melo HOM05D006997 ORTHO05D008713 8.1e-31 137.1 69 91.3
Duzib093G0368 Durio zibethinus HOM05D006997 ORTHO05D008713 8.1e-31 137.1 69 91.3
Migut.N02878 Erythranthe guttata HOM05D006997 ORTHO05D008713 8.1e-31 137.1 69 91.3
Eucgr.F00379 Eucalyptus grandis HOM05D006997 ORTHO05D008713 8.1e-31 137.1 69 89.9
Gohir.D01G115600 Gossypium hirsutum HOM05D006997 ORTHO05D008713 8.1e-31 137.1 69 91.3
Gorai.002G141200 Gossypium raimondii HOM05D006997 ORTHO05D008713 8.1e-31 137.1 69 91.3
Sed0013982 Sechium edule HOM05D006997 ORTHO05D008713 8.1e-31 137.1 69 91.3
Thecc.08G101800 Theobroma cacao HOM05D006997 ORTHO05D008713 8.1e-31 137.1 69 91.3
GSVIVG01009084001 Vitis vinifera HOM05D006997 ORTHO05D008713 8.1e-31 137.1 69 92.8
Ciclev10001423m.g Citrus clementina HOM05D006997 ORTHO05D008713 1.1e-30 136.7 69 89.9
Nn5g29994 Nelumbo nucifera HOM05D006997 ORTHO05D008713 1.1e-30 136.7 69 91.3
Nitab4.5_0000786g0050 Nicotiana tabacum HOM05D006997 ORTHO05D008713 1.1e-30 136.7 69 91.3
CAN.G857.15 Capsicum annuum HOM05D006997 ORTHO05D008713 1.4e-30 136.3 69 89.9
Rhsim06G0078000 Rhododendron simsii HOM05D006997 ORTHO05D008713 1.4e-30 136.3 69 89.9
Actinidia30795 Actinidia chinensis HOM05D006997 ORTHO05D008713 1.8e-30 136.0 69 89.9
ATR0684G208 Amborella trichopoda HOM05D006997 ORTHO05D008713 1.8e-30 136.0 69 88.4
Dinv07073 Davidia involucrata HOM05D006997 ORTHO05D008713 1.8e-30 136.0 69 89.9
Glyma.04G099000 Glycine max HOM05D006997 ORTHO05D008713 1.8e-30 136.0 69 88.4
Glyma.06G100700 Glycine max HOM05D006997 ORTHO05D008713 1.8e-30 136.0 69 88.4
Peaxi162Scf00030g02415 Petunia axillaris HOM05D006997 ORTHO05D008713 2.4e-30 135.6 69 91.3
CSS0033006 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 3.1e-30 135.2 69 89.9
CSS0036565 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 3.1e-30 135.2 69 89.9
Gohir.A01G132700 Gossypium hirsutum HOM05D006997 ORTHO05D008713 3.1e-30 135.2 69 89.9
Lsat_1_v5_gn_1_3100 Lactuca sativa HOM05D006997 ORTHO05D008713 3.1e-30 135.2 69 89.9
Lj4C96G9 Lonicera japonica HOM05D006997 ORTHO05D008713 3.1e-30 135.2 69 89.9
SalBow1G8133 Salvia bowleyana HOM05D006997 ORTHO05D008713 3.1e-30 135.2 69 89.9
COL.COLO4_12006 Corchorus olitorius HOM05D006997 ORTHO05D008713 4.0e-30 134.8 69 89.9
Duzib116G0677 Durio zibethinus HOM05D006997 ORTHO05D008713 4.0e-30 134.8 69 89.9
Lj1g0014637 Lotus japonicus HOM05D006997 ORTHO05D008713 4.0e-30 134.8 69 89.9
Phvul.009G033100 Phaseolus vulgaris HOM05D006997 ORTHO05D008713 4.0e-30 134.8 69 88.4
VMungo1309G1562 Vigna mungo HOM05D006997 ORTHO05D008713 4.0e-30 134.8 69 88.4
Atru.chr13.1117 Acer truncatum HOM05D006997 ORTHO05D008713 5.3e-30 134.4 69 89.9
Actinidia10345 Actinidia chinensis HOM05D006997 ORTHO05D008713 5.3e-30 134.4 69 88.4
Medtr5g099370 Medicago truncatula HOM05D006997 ORTHO05D008713 5.3e-30 134.4 69 85.5
Hund26989 Selenicereus undatus HOM05D006997 ORTHO05D008713 5.3e-30 134.4 69 88.4
THA.LOC104806793 Tarenaya hassleriana HOM05D006997 ORTHO05D008713 5.3e-30 134.4 69 91.3
arahy.Tifrunner.gnm1.ann1.50RG73 Arachis hypogaea HOM05D006997 ORTHO05D008713 9.0e-30 133.7 69 88.4
Cc10_g06680 Coffea canephora HOM05D006997 ORTHO05D008713 9.0e-30 133.7 69 89.9
MD08G1188600 Malus domestica HOM05D006997 ORTHO05D008713 9.0e-30 133.7 69 88.4
Pp3c2_7910 Physcomitrium patens HOM05D006997 ORTHO05D008713 1.2e-29 133.3 69 89.9
Psat2g000280 Pisum sativum HOM05D006997 ORTHO05D008713 1.2e-29 133.3 69 87.0
Lalb_Chr08g0242211 Lupinus albus HOM05D006997 ORTHO05D008713 1.5e-29 132.9 69 88.4
Prupe.1G523100 Prunus persica HOM05D006997 ORTHO05D008713 1.5e-29 132.9 69 87.0
arahy.Tifrunner.gnm1.ann1.2V06JV Arachis hypogaea HOM05D006997 ORTHO05D008713 2.6e-29 132.1 69 87.0
arahy.Tifrunner.gnm1.ann1.I4BPU4 Arachis hypogaea HOM05D006997 ORTHO05D008713 2.6e-29 132.1 69 87.0
HPP92_005985 Vanilla planifolia HOM05D006997 ORTHO05D008713 2.6e-29 132.1 69 85.5
PSO447G0258 Papaver somniferum HOM05D006997 ORTHO05D008713 4.5e-29 131.3 69 88.4
PSO700G0253 Papaver somniferum HOM05D006997 ORTHO05D008713 4.5e-29 131.3 69 88.4
Ca_20316_v3 Cicer arietinum L. HOM05D006997 ORTHO05D008713 5.8e-29 131.0 69 85.5
PSO170G4713 Papaver somniferum HOM05D006997 ORTHO05D008713 7.6e-29 130.6 69 87.0
arahy.Tifrunner.gnm1.ann1.R22A6K Arachis hypogaea HOM05D006997 ORTHO05D008713 1.3e-28 129.8 69 85.5
RcHm_v2.0_Chr7g0242241 Rosa chinensis HOM05D006997 ORTHO05D008713 1.3e-28 129.8 68 88.2
arahy.Tifrunner.gnm1.ann1.L1DSY1 Arachis hypogaea HOM05D006997 ORTHO05D008713 1.1e-27 126.7 69 82.6
AagrBONN_evm.TU.Sc2ySwM_228.3329 Anthoceros agrestis HOM05D006997 ORTHO05D008713 1.4e-27 126.3 69 81.2
SMO203G0247 Selaginella moellendorffii HOM05D006997 ORTHO05D008713 2.4e-27 125.6 75 80.0
TPR.G18644 Trifolium pratense HOM05D006997 ORTHO05D008713 4.6e-26 121.3 69 79.7
arahy.Tifrunner.gnm1.ann1.U0EC22 Arachis hypogaea HOM05D006997 ORTHO05D008713 6.7e-25 117.5 69 79.7
Mapoly0028s0040 Marchantia polymorpha HOM05D006997 ORTHO05D008713 3.3e-24 115.2 69 76.8
ClCG11G014320 Citrullus lanatus HOM05D006997 ORTHO05D008713 1.3e-23 113.2 55 94.5
arahy.Tifrunner.gnm1.ann1.M6BDRX Arachis hypogaea HOM05D006997 ORTHO05D008713 1.4e-22 109.8 55 90.9
arahy.Tifrunner.gnm1.ann1.I3UG1J Arachis hypogaea HOM05D006997 ORTHO05D008713 1.3e-20 103.2 54 87.0
Cre12.g558400 Chlamydomonas reinhardtii HOM05D006997 ORTHO05D008713 1.9e-19 99.4 73 68.5
Oeu029744.1 Olea europaea HOM05D006997 ORTHO05D008713 1.2e-18 96.7 48 89.6
PRCOL_00000168 Prasinoderma coloniale HOM05D006997 ORTHO05D008713 6.0e-18 94.4 75 68.0
SGA_v2.0_scaffold28G11904 Striga asiatica HOM05D006997 ORTHO05D008713 6.0e-18 94.4 167 37.1
Phvul.001G070300 Phaseolus vulgaris HOM05D006997 ORTHO05D008713 7.9e-18 94.0 49 81.6
CDE10G0159 Ceratophyllum demersum HOM05D006997 ORTHO05D008713 1.0e-17 93.6 97 53.6
SHI35102 Sapria himalayana HOM05D006997 ORTHO05D008713 1.0e-17 93.6 55 80.0
MCO01G675 Micromonas commoda HOM05D006997 ORTHO05D008713 1.3e-17 93.2 74 63.5
arahy.Tifrunner.gnm1.ann1.G6707F Arachis hypogaea HOM05D006997 ORTHO05D008713 7.2e-11 70.9 33 97.0
DCAR_012882 Daucus carota HOM05D006997 ORTHO05D008713 7.9e-10 67.4 69 52.2
Zm00001eb313370 Zea mays HOM05D006997 ORTHO05D008713 1.0e-09 67.0 32 90.6
CBR_g19661 Chara braunii HOM05D006997 ORTHO05D008713 3.9e-09 65.1 46 67.4


User provided reference genes

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