Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10970 Sequoiadendron giganteum HOM05D005900 ORTHO05D007306 1.0e-143 513.5 267 100.0
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 1.8e-15 87.4 209 32.1
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 4.4e-14 82.8 257 31.1
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 5.7e-14 82.4 243 30.0
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 2.2e-13 80.5 235 29.8
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 8.3e-13 78.6 104 46.2
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.1e-12 78.2 226 30.1
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 2.4e-12 77.0 236 30.1
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 3.1e-12 76.6 106 42.5
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 5.4e-12 75.9 141 36.9
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 7.0e-12 75.5 245 31.0
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 9.1e-12 75.1 182 33.5
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 1.2e-11 74.7 222 32.4
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.2e-11 74.7 236 30.1
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.6e-11 74.3 236 29.7
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 1.6e-11 74.3 105 41.0
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 2.7e-11 73.6 104 43.3
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 4.5e-11 72.8 230 31.3
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 5.9e-11 72.4 218 31.2
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 5.9e-11 72.4 104 44.2
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 7.7e-11 72.0 224 26.8
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 1.0e-10 71.6 255 30.6
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 1.3e-10 71.2 235 31.9
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 1.3e-10 71.2 249 31.3
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 1.3e-10 71.2 249 32.1
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 1.7e-10 70.9 221 28.5
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 2.2e-10 70.5 240 30.4
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 2.2e-10 70.5 232 30.2
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 2.9e-10 70.1 211 28.9
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 2.9e-10 70.1 239 31.4
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 2.9e-10 70.1 173 29.5
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 2.9e-10 70.1 249 32.9
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 6.5e-10 68.9 225 26.7
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 8.5e-10 68.6 236 30.1
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.1e-09 68.2 142 35.9
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 1.5e-09 67.8 227 29.5
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 1.5e-09 67.8 234 30.3
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 1.9e-09 67.4 239 31.0
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 1.9e-09 67.4 104 39.4
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 2.5e-09 67.0 220 31.4
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 2.5e-09 67.0 178 33.1
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 3.2e-09 66.6 107 38.3
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 4.2e-09 66.2 184 31.5
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 7.2e-09 65.5 103 35.9
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 7.2e-09 65.5 188 27.7
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 9.4e-09 65.1 103 35.9
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 9.4e-09 65.1 247 29.6
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 1.2e-08 64.7 104 36.5
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 1.2e-08 64.7 238 30.3
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 1.6e-08 64.3 244 31.1
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 1.6e-08 64.3 234 28.2
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 1.6e-08 64.3 239 28.5
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 2.1e-08 63.9 224 28.6
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 2.1e-08 63.9 216 28.2
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 2.1e-08 63.9 213 29.6
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 2.7e-08 63.5 253 31.6
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 2.7e-08 63.5 234 25.6
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 3.6e-08 63.2 218 28.9
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 4.7e-08 62.8 253 31.2
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 6.1e-08 62.4 216 27.8
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 6.1e-08 62.4 70 45.7
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 1.0e-07 61.6 228 31.1
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.0e-07 61.6 243 29.6
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 1.4e-07 61.2 234 30.3
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 1.4e-07 61.2 245 32.2
Pp3c21_5120 Physcomitrium patens HOM05D062742 ORTHO05D048768 1.8e-07 60.8 182 30.8
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 1.8e-07 60.8 204 25.5
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.8e-07 60.8 209 29.2
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 2.3e-07 60.5 237 30.0
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 3.0e-07 60.1 219 29.2
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 3.0e-07 60.1 173 30.6
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 3.0e-07 60.1 183 31.7
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 3.0e-07 60.1 245 29.4
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 5.2e-07 59.3 85 36.5
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 5.2e-07 59.3 223 30.0
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 6.8e-07 58.9 193 29.0
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 1.2e-06 58.2 226 25.7
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.5e-06 57.8 258 28.7
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 3.4e-06 56.6 103 38.8
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 3.4e-06 56.6 237 28.3
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 3.4e-06 56.6 237 28.3
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 4.4e-06 56.2 211 27.0
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 4.4e-06 56.2 237 27.8
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 4.4e-06 56.2 247 28.3
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 5.7e-06 55.8 103 38.8
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 5.7e-06 55.8 275 24.7


User provided reference genes

Program Settings