Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10967 Sequoiadendron giganteum HOM05D001484 ORTHO05D001564 1.9e-119 432.6 231 100.0
SEGI_00063 Sequoiadendron giganteum HOM05D001484 ORTHO05D001564 1.9e-42 176.8 108 81.5
SEGI_24396 Sequoiadendron giganteum HOM05D001484 ORTHO05D001564 1.4e-21 107.5 99 52.5
MBI03_g36854_MAGBIO Magnolia biondii HOM05D001484 ORTHO05D001564 1.5e-15 87.4 106 43.4
PSO339G0606 Papaver somniferum HOM05D001484 ORTHO05D001564 4.2e-13 79.3 108 40.7
PSO384G4709 Papaver somniferum HOM05D001484 ORTHO05D001564 7.1e-13 78.6 108 40.7
TAR623G0078 Trochodendron aralioides HOM05D001484 ORTHO05D001564 1.0e-11 74.7 99 39.4
Nn5g26754 Nelumbo nucifera HOM05D001484 ORTHO05D001564 1.3e-11 74.3 99 42.4
CDE07G0968 Ceratophyllum demersum HOM05D001484 ORTHO05D001564 1.8e-11 73.9 103 38.8
GSVIVG01029847001 Vitis vinifera HOM05D001484 ORTHO05D001564 1.5e-10 70.9 99 40.4
ATR1127G141 Amborella trichopoda HOM05D001484 ORTHO05D001564 2.5e-10 70.1 124 38.7
Cfa016988 Carpinus fangiana HOM05D001484 ORTHO05D001564 4.3e-10 69.3 101 37.6
MBI03_g14058_MAGBIO Magnolia biondii HOM05D001484 ORTHO05D001564 5.7e-10 68.9 106 40.6
Potri.016G142500 Populus trichocarpa HOM05D001484 ORTHO05D001564 1.3e-09 67.8 103 35.9
Mapoly0096s0053 Marchantia polymorpha HOM05D001484 ORTHO05D001564 2.2e-09 67.0 109 39.4
Haze_21217 Corylus avellana HOM05D001484 ORTHO05D001564 2.8e-09 66.6 101 37.6
Nn1g02140 Nelumbo nucifera HOM05D001484 ORTHO05D001564 6.3e-09 65.5 107 34.6
PSO170G2858 Papaver somniferum HOM05D001484 ORTHO05D001564 6.3e-09 65.5 111 35.1
ATR0626G186 Amborella trichopoda HOM05D001484 ORTHO05D001564 1.1e-08 64.7 103 37.9
TWI74G0430 Tripterygium wilfordii HOM05D001484 ORTHO05D001564 1.4e-08 64.3 101 35.6
Manes.09G120300 Manihot esculenta HOM05D001484 ORTHO05D001564 1.8e-08 63.9 100 37.0
TAR633G0959 Trochodendron aralioides HOM05D001484 ORTHO05D001564 1.8e-08 63.9 154 29.9
FAN24G1998 Fragaria x ananassa HOM05D001484 ORTHO05D001564 2.4e-08 63.5 137 32.8
Potri.014G138400 Populus trichocarpa HOM05D001484 ORTHO05D001564 2.4e-08 63.5 104 34.6
Haze_00973 Corylus avellana HOM05D001484 ORTHO05D001564 4.1e-08 62.8 110 33.6
Zm00001eb330790 Zea mays HOM05D001484 ORTHO05D001564 4.1e-08 62.8 99 34.3
Actinidia23469 Actinidia chinensis HOM05D001484 ORTHO05D001564 5.3e-08 62.4 110 34.5
Duzib138G1867 Durio zibethinus HOM05D001484 ORTHO05D001564 5.3e-08 62.4 114 35.1
MD04G1179600 Malus domestica HOM05D001484 ORTHO05D001564 5.3e-08 62.4 101 33.7
Os05g0312000 Oryza sativa ssp. japonica HOM05D001484 ORTHO05D001564 5.3e-08 62.4 113 32.7
Sabra14G0104400 Salix brachista HOM05D001484 ORTHO05D001564 5.3e-08 62.4 105 34.3
Cfa006103 Carpinus fangiana HOM05D001484 ORTHO05D001564 6.9e-08 62.0 137 32.1
FAN15G3626 Fragaria x ananassa HOM05D001484 ORTHO05D001564 6.9e-08 62.0 111 33.3
PSO407G0334 Papaver somniferum HOM05D001484 ORTHO05D001564 6.9e-08 62.0 111 33.3
Haze_00972 Corylus avellana HOM05D001484 ORTHO05D001564 9.0e-08 61.6 108 35.2
Eucgr.A00858 Eucalyptus grandis HOM05D001484 ORTHO05D001564 9.0e-08 61.6 100 33.0
FvH4_2g23980 Fragaria vesca HOM05D001484 ORTHO05D001564 9.0e-08 61.6 111 33.3
MBI17_g11997_MAGBIO Magnolia biondii HOM05D001484 ORTHO05D001564 9.0e-08 61.6 137 29.9
RcHm_v2.0_Chr6g0291641 Rosa chinensis HOM05D001484 ORTHO05D001564 9.0e-08 61.6 111 34.2
Sabra04G0158500 Salix brachista HOM05D001484 ORTHO05D001564 9.0e-08 61.6 103 34.0
CiPaw.02G091100 Carya illinoinensis HOM05D001484 ORTHO05D001564 1.2e-07 61.2 108 34.3
Prupe.8G245000 Prunus persica HOM05D001484 ORTHO05D001564 1.2e-07 61.2 111 33.3
QL12p022706 Quercus lobata HOM05D001484 ORTHO05D001564 1.2e-07 61.2 110 34.5
Rhsim04G0207700 Rhododendron simsii HOM05D001484 ORTHO05D001564 1.2e-07 61.2 110 33.6
Rhsim05G0234500 Rhododendron simsii HOM05D001484 ORTHO05D001564 1.2e-07 61.2 129 30.2
CSS0040442 Camellia sinensis var. sinensis HOM05D001484 ORTHO05D001564 1.5e-07 60.8 110 32.7
CSS0045298 Camellia sinensis var. sinensis HOM05D001484 ORTHO05D001564 1.5e-07 60.8 110 32.7
CiPaw.09G224900 Carya illinoinensis HOM05D001484 ORTHO05D001564 1.5e-07 60.8 99 34.3
Dinv38382 Davidia involucrata HOM05D001484 ORTHO05D001564 1.5e-07 60.8 111 34.2
FAN20G1787 Fragaria x ananassa HOM05D001484 ORTHO05D001564 1.5e-07 60.8 109 33.9
Os07g0681500 Oryza sativa ssp. japonica HOM05D001484 ORTHO05D001564 1.5e-07 60.8 99 34.3
Prupe.6G299600 Prunus persica HOM05D001484 ORTHO05D001564 1.5e-07 60.8 101 34.7
Nn4g26168 Nelumbo nucifera HOM05D001484 ORTHO05D001564 2.0e-07 60.5 110 30.9
PGR031G2937 Punica granatum HOM05D001484 ORTHO05D001564 2.0e-07 60.5 101 32.7
QL07p031519 Quercus lobata HOM05D001484 ORTHO05D001564 2.0e-07 60.5 99 36.4
vmacro08269 Vaccinium macrocarpon HOM05D001484 ORTHO05D001564 2.0e-07 60.5 110 35.5
Atru.chr5.1359 Acer truncatum HOM05D001484 ORTHO05D001564 2.6e-07 60.1 110 34.5
Cpa.g.sc16.34 Carica papaya HOM05D001484 ORTHO05D001564 2.6e-07 60.1 111 34.2
FAN12G2594 Fragaria x ananassa HOM05D001484 ORTHO05D001564 2.6e-07 60.1 117 31.6
arahy.Tifrunner.gnm1.ann1.KZ0R87 Arachis hypogaea HOM05D001484 ORTHO05D001564 3.4e-07 59.7 107 33.6
COL.COLO4_25124 Corchorus olitorius HOM05D001484 ORTHO05D001564 3.4e-07 59.7 101 37.6
Eucgr.A00855 Eucalyptus grandis HOM05D001484 ORTHO05D001564 3.4e-07 59.7 100 32.0
CSS0036150 Camellia sinensis var. sinensis HOM05D001484 ORTHO05D001564 4.5e-07 59.3 106 33.0
CSS0042300 Camellia sinensis var. sinensis HOM05D001484 ORTHO05D001564 4.5e-07 59.3 106 33.0
FAN07G0967 Fragaria x ananassa HOM05D001484 ORTHO05D001564 4.5e-07 59.3 117 31.6
MD11G1289800 Malus domestica HOM05D001484 ORTHO05D001564 4.5e-07 59.3 112 33.0
MD12G1194700 Malus domestica HOM05D001484 ORTHO05D001564 4.5e-07 59.3 100 33.0
Medtr7g094550 Medicago truncatula HOM05D001484 ORTHO05D001564 4.5e-07 59.3 116 31.9
RcHm_v2.0_Chr4g0418541 Rosa chinensis HOM05D001484 ORTHO05D001564 4.5e-07 59.3 117 33.3
FAN27G1317 Fragaria x ananassa HOM05D001484 ORTHO05D001564 5.9e-07 58.9 111 32.4
Glyma.13G209800 Glycine max HOM05D001484 ORTHO05D001564 5.9e-07 58.9 107 32.7
Lj2A54G84 Lonicera japonica HOM05D001484 ORTHO05D001564 5.9e-07 58.9 99 35.4
Lj1g0010239 Lotus japonicus HOM05D001484 ORTHO05D001564 5.9e-07 58.9 101 35.6
QL06p005472 Quercus lobata HOM05D001484 ORTHO05D001564 5.9e-07 58.9 110 32.7
QL07p030546 Quercus lobata HOM05D001484 ORTHO05D001564 5.9e-07 58.9 99 35.4
PGSC0003DMG401000943 Solanum tuberosum HOM05D001484 ORTHO05D001564 5.9e-07 58.9 144 31.2
DCAR_024573 Daucus carota HOM05D001484 ORTHO05D001564 7.7e-07 58.5 105 36.2
Gohir.A11G120500 Gossypium hirsutum HOM05D001484 ORTHO05D001564 7.7e-07 58.5 114 35.1
Lj3A761T51 Lonicera japonica HOM05D001484 ORTHO05D001564 7.7e-07 58.5 109 34.9
Lalb_Chr18g0056021 Lupinus albus HOM05D001484 ORTHO05D001564 7.7e-07 58.5 106 34.0
RcHm_v2.0_Chr3g0459591 Rosa chinensis HOM05D001484 ORTHO05D001564 7.7e-07 58.5 101 37.6
GSVIVG01011094001 Vitis vinifera HOM05D001484 ORTHO05D001564 7.7e-07 58.5 100 36.0
Aqoxy2G03236 Aquilegia oxysepala HOM05D001484 ORTHO05D001564 1.0e-06 58.2 109 31.2
Haze_04747 Corylus avellana HOM05D001484 ORTHO05D001564 1.0e-06 58.2 137 32.1
Dinv16926 Davidia involucrata HOM05D001484 ORTHO05D001564 1.0e-06 58.2 99 34.3
Lalb_Chr20g0118371 Lupinus albus HOM05D001484 ORTHO05D001564 1.0e-06 58.2 106 33.0
Zm00001eb285040 Zea mays HOM05D001484 ORTHO05D001564 1.0e-06 58.2 105 31.4
Ciclev10010920m.g Citrus clementina HOM05D001484 ORTHO05D001564 1.3e-06 57.8 103 33.0
Dinv32963 Davidia involucrata HOM05D001484 ORTHO05D001564 1.3e-06 57.8 111 32.4
FAN22G0073 Fragaria x ananassa HOM05D001484 ORTHO05D001564 1.3e-06 57.8 117 30.8
FAN22G0352 Fragaria x ananassa HOM05D001484 ORTHO05D001564 1.3e-06 57.8 117 30.8
Gorai.007G134500 Gossypium raimondii HOM05D001484 ORTHO05D001564 1.3e-06 57.8 137 32.1
TAR365G1253 Trochodendron aralioides HOM05D001484 ORTHO05D001564 1.3e-06 57.8 111 32.4
VMungo1383G2910 Vigna mungo HOM05D001484 ORTHO05D001564 1.7e-06 57.4 102 32.4
Actinidia00731 Actinidia chinensis HOM05D001484 ORTHO05D001564 2.2e-06 57.0 110 33.6
CAN.G1006.16 Capsicum annuum HOM05D001484 ORTHO05D001564 2.2e-06 57.0 107 33.6
Gohir.D12G005700 Gossypium hirsutum HOM05D001484 ORTHO05D001564 2.2e-06 57.0 113 32.7
Gorai.008G005500 Gossypium raimondii HOM05D001484 ORTHO05D001564 2.2e-06 57.0 113 32.7
CiPaw.02G091000 Carya illinoinensis HOM05D001484 ORTHO05D001564 2.9e-06 56.6 113 31.0
COL.COLO4_09143 Corchorus olitorius HOM05D001484 ORTHO05D001564 2.9e-06 56.6 110 34.5
Nitab4.5_0000295g0140 Nicotiana tabacum HOM05D001484 ORTHO05D001564 2.9e-06 56.6 155 29.7
Ciclev10018517m.g Citrus clementina HOM05D001484 ORTHO05D001564 3.8e-06 56.2 110 33.6
Gohir.A12G006250 Gossypium hirsutum HOM05D001484 ORTHO05D001564 3.8e-06 56.2 113 31.9
Glyma.15G102800 Glycine max HOM05D001484 ORTHO05D001564 5.0e-06 55.8 107 31.8
Rhsim01G0276500 Rhododendron simsii HOM05D001484 ORTHO05D001564 5.0e-06 55.8 136 29.4
TPR.G14189 Trifolium pratense HOM05D001484 ORTHO05D001564 5.0e-06 55.8 111 31.5
Actinidia11473 Actinidia chinensis HOM05D001484 ORTHO05D001564 6.5e-06 55.5 103 31.1
FvH4_6g09250 Fragaria vesca HOM05D001484 ORTHO05D001564 6.5e-06 55.5 100 31.0
FAN14G1546 Fragaria x ananassa HOM05D001484 ORTHO05D001564 6.5e-06 55.5 100 31.0
MD03G1269000 Malus domestica HOM05D001484 ORTHO05D001564 6.5e-06 55.5 112 31.2
CSS0022190 Camellia sinensis var. sinensis HOM05D001484 ORTHO05D001564 8.5e-06 55.1 111 30.6


User provided reference genes

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