Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10903 Sequoiadendron giganteum HOM05D000113 ORTHO05D005835 0.0e+00 1122.8 587 100.0
MBI09_g02133_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D005835 1.2e-77 295.0 536 39.4
Nn5g27790 Nelumbo nucifera HOM05D000113 ORTHO05D005835 1.0e-76 292.0 507 41.4
TAR381G0519 Trochodendron aralioides HOM05D000113 ORTHO05D005835 1.3e-74 285.0 534 40.6
Oeu058638.1 Olea europaea HOM05D000113 ORTHO05D005835 6.6e-71 272.7 510 38.2
Sopen01g046100 Solanum pennellii HOM05D000113 ORTHO05D005835 2.5e-70 270.8 521 39.9
Cfa004507 Carpinus fangiana HOM05D003925 ORTHO05D005835 4.3e-70 270.0 507 38.1
Solyc01g103690.4 Solanum lycopersicum HOM05D000113 ORTHO05D005835 9.5e-70 268.9 524 39.3
FAN08G0819 Fragaria x ananassa HOM05D000113 ORTHO05D005835 1.2e-69 268.5 525 37.5
Manes.10G119700 Manihot esculenta HOM05D000113 ORTHO05D005835 1.2e-69 268.5 545 37.6
RcHm_v2.0_Chr7g0209021 Rosa chinensis HOM05D000113 ORTHO05D005835 1.4e-68 265.0 542 36.9
FvH4_5g21580 Fragaria vesca HOM05D000113 ORTHO05D005835 1.8e-68 264.6 525 37.1
FAN18G0136 Fragaria x ananassa HOM05D000113 ORTHO05D005835 2.3e-68 264.2 525 37.1
Mapoly0048s0072 Marchantia polymorpha HOM05D000113 ORTHO05D005835 3.0e-68 263.8 670 33.1
DCAR_029273 Daucus carota HOM05D000113 ORTHO05D005835 6.8e-68 262.7 526 36.9
Ciclev10000030m.g Citrus clementina HOM05D000113 ORTHO05D005835 8.9e-68 262.3 502 37.6
GSVIVG01023271001 Vitis vinifera HOM05D000113 ORTHO05D005835 4.4e-67 260.0 527 37.6
FAN04G1601 Fragaria x ananassa HOM05D000113 ORTHO05D005835 5.7e-67 259.6 541 37.0
CiPaw.06G173200 Carya illinoinensis HOM05D000113 ORTHO05D005835 7.5e-67 259.2 501 37.9
Actinidia39011 Actinidia chinensis HOM05D000113 ORTHO05D005835 1.3e-66 258.5 493 37.1
CSS0005911 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005835 1.7e-66 258.1 509 37.7
MSTRG.16496 Avicennia marina HOM05D000113 ORTHO05D005835 2.2e-66 257.7 525 37.9
Prupe.1G577400 Prunus persica HOM05D000113 ORTHO05D005835 6.4e-66 256.1 528 36.9
Thecc.02G023600 Theobroma cacao HOM05D000113 ORTHO05D005835 1.1e-65 255.4 533 36.0
TWI59G0289 Tripterygium wilfordii HOM05D000113 ORTHO05D005835 1.1e-65 255.4 497 38.0
Glyma.17G001100 Glycine max HOM05D000113 ORTHO05D005835 2.4e-65 254.2 531 38.6
CSS0010677 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005835 5.4e-65 253.1 507 37.7
MD15G1433800 Malus domestica HOM05D000113 ORTHO05D005835 9.2e-65 252.3 526 35.7
Potri.004G222900 Populus trichocarpa HOM05D000113 ORTHO05D005835 9.2e-65 252.3 537 36.1
CAN.G798.54 Capsicum annuum HOM05D000113 ORTHO05D005835 1.6e-64 251.5 524 38.2
SGA_v2.0_scaffold272G46375 Striga asiatica HOM05D000113 ORTHO05D005835 1.6e-64 251.5 530 35.8
Phvul.003G075000 Phaseolus vulgaris HOM05D000113 ORTHO05D005835 2.7e-64 250.8 535 38.3
CDE04G1155 Ceratophyllum demersum HOM05D000113 ORTHO05D005835 3.5e-64 250.4 523 36.9
Nitab4.5_0000948g0060 Nicotiana tabacum HOM05D000113 ORTHO05D005835 3.5e-64 250.4 526 37.5
Pp3c26_14400 Physcomitrium patens HOM05D000113 ORTHO05D005835 5.9e-64 249.6 542 35.4
Gorai.002G216000 Gossypium raimondii HOM05D000113 ORTHO05D005835 7.8e-64 249.2 540 35.7
Gohir.D01G173900 Gossypium hirsutum HOM05D000113 ORTHO05D005835 1.0e-63 248.8 538 35.3
PGR042G0228 Punica granatum HOM05D000113 ORTHO05D005835 1.3e-63 248.4 535 37.0
Aqoxy6G00123 Aquilegia oxysepala HOM05D000113 ORTHO05D005835 3.0e-63 247.3 500 36.8
Sabra01G0168800 Salix brachista HOM05D000113 ORTHO05D005835 6.6e-63 246.1 554 35.9
Aa31LG2G11010 Aethionema arabicum HOM05D000113 ORTHO05D005835 1.1e-62 245.4 530 36.4
TPR.G5965 Trifolium pratense HOM05D000113 ORTHO05D005835 1.5e-62 245.0 528 37.5
HanXRQChr03g0065101 Helianthus annuus HOM05D000113 ORTHO05D005835 4.3e-62 243.4 506 37.5
CANSAT54G2975 Cannabis sativa HOM05D000113 ORTHO05D005835 7.3e-62 242.7 519 36.0
Nitab4.5_0002596g0100 Nicotiana tabacum HOM05D000113 ORTHO05D005835 7.3e-62 242.7 488 38.1
Psat4g000920 Pisum sativum HOM05D000113 ORTHO05D005835 7.3e-62 242.7 533 36.2
COL.COLO4_17738 Corchorus olitorius HOM05D000113 ORTHO05D005835 3.6e-61 240.4 538 35.3
arahy.Tifrunner.gnm1.ann1.NM6SG7 Arachis hypogaea HOM05D000113 ORTHO05D005835 6.2e-61 239.6 533 36.4
CsaV3_3G019320 Cucumis sativus L. HOM05D000113 ORTHO05D005835 1.0e-60 238.8 542 34.5
arahy.Tifrunner.gnm1.ann1.F0MMCG Arachis hypogaea HOM05D000113 ORTHO05D005835 1.4e-60 238.4 533 36.8
Carub.0002s0657 Capsella rubella HOM05D000113 ORTHO05D005835 5.2e-60 236.5 506 36.6
SalBow8G4197 Salvia bowleyana HOM05D000113 ORTHO05D005835 5.2e-60 236.5 521 35.5
Migut.B00785 Erythranthe guttata HOM05D000113 ORTHO05D005835 6.8e-60 236.1 525 35.0
Cc02_g23020 Coffea canephora HOM05D000113 ORTHO05D005835 8.9e-60 235.7 498 35.3
ECA240G0867 Erigeron canadensis HOM05D000113 ORTHO05D005835 1.2e-59 235.3 536 36.0
VMungo1215G2435 Vigna mungo HOM05D000113 ORTHO05D005835 1.2e-59 235.3 535 36.1
Sed0015728 Sechium edule HOM05D000113 ORTHO05D005835 2.0e-59 234.6 537 35.6
Sp2g05520 Schrenkiella parvula HOM05D000113 ORTHO05D005835 4.4e-59 233.4 541 34.9
AT1G58060 Arabidopsis thaliana HOM05D000113 ORTHO05D005835 7.5e-59 232.6 537 35.9
Sc07g0004580 Simmondsia chinensis HOM05D000113 ORTHO05D005835 1.3e-58 231.9 524 35.3
AL2G17950 Arabidopsis lyrata HOM05D000113 ORTHO05D005835 1.7e-58 231.5 578 35.5
Gohir.A01G182800 Gossypium hirsutum HOM05D000113 ORTHO05D005835 1.7e-58 231.5 464 36.4
HPP92_005700 Vanilla planifolia HOM05D000113 ORTHO05D005835 6.4e-58 229.6 555 34.4
Lsat_1_v5_gn_9_120661 Lactuca sativa HOM05D000113 ORTHO05D005835 8.3e-58 229.2 512 35.2
C09p23220 Brassica napus HOM05D000113 ORTHO05D005835 1.1e-57 228.8 503 35.2
BolC9t55241H Brassica oleracea HOM05D000113 ORTHO05D005835 1.1e-57 228.8 503 35.2
Medtr4g134790 Medicago truncatula HOM05D000113 ORTHO05D005835 1.9e-57 228.0 536 35.3
Lalb_Chr13g0304501 Lupinus albus HOM05D000113 ORTHO05D005835 2.4e-57 227.6 537 35.8
A09p18610 Brassica napus HOM05D000113 ORTHO05D005835 5.4e-57 226.5 548 33.9
Ca_13538_v3 Cicer arietinum L. HOM05D000113 ORTHO05D005835 5.4e-57 226.5 530 37.0
MELO3C019423.2 Cucumis melo HOM05D000113 ORTHO05D005835 5.4e-57 226.5 543 34.1
Thhalv10023215m.g Eutrema salsugineum HOM05D000113 ORTHO05D005835 5.4e-57 226.5 545 34.1
Lj5C262G4 Lonicera japonica HOM05D003925 ORTHO05D005835 6.0e-56 223.0 497 35.2
THA.LOC104820242 Tarenaya hassleriana HOM05D000113 ORTHO05D005835 1.0e-55 222.2 545 34.5
BraA09t37485Z Brassica rapa HOM05D000113 ORTHO05D005835 2.3e-55 221.1 545 33.4
HPP92_005690 Vanilla planifolia HOM05D000113 ORTHO05D005835 2.3e-55 221.1 561 33.5
ClCG05G009410 Citrullus lanatus HOM05D000113 ORTHO05D005835 3.0e-55 220.7 507 33.5
Ah.02g128270 Amaranthus hybridus HOM05D000113 ORTHO05D005835 1.5e-54 218.4 502 34.1
Sp2g05550 Schrenkiella parvula HOM05D000113 ORTHO05D005835 1.3e-50 205.3 541 32.2
EL10Ac6g14137 Beta vulgaris HOM05D000113 ORTHO05D005835 2.2e-50 204.5 506 33.2
AagrBONN_evm.TU.Sc2ySwM_344.5572 Anthoceros agrestis HOM05D000113 ORTHO05D005835 2.9e-50 204.1 559 31.8
Peaxi162Scf00011g00940 Petunia axillaris HOM05D000113 ORTHO05D005835 1.9e-49 201.4 524 33.2
Haze_10062 Corylus avellana HOM05D000113 ORTHO05D005835 7.1e-49 199.5 435 36.1
SMO164G0084 Selaginella moellendorffii HOM05D000113 ORTHO05D005835 4.6e-48 196.8 516 33.1
AT1G58050 Arabidopsis thaliana HOM05D000113 ORTHO05D005835 2.3e-47 194.5 539 32.3
AUR62040619 Chenopodium quinoa HOM05D000113 ORTHO05D005835 5.1e-47 193.4 530 32.1
BcaB07g31161 Brassica carinata HOM05D000113 ORTHO05D005835 5.6e-46 189.9 592 31.9
Lj2g0019885 Lotus japonicus HOM05D000113 ORTHO05D005835 5.6e-46 189.9 471 33.3
Atru.chr6.768 Acer truncatum HOM05D000113 ORTHO05D005835 2.6e-43 181.0 295 42.0
Carub.0002s0658 Capsella rubella HOM05D000113 ORTHO05D005835 1.4e-41 175.3 540 31.3
Thhalv10023216m.g Eutrema salsugineum HOM05D000113 ORTHO05D005835 2.4e-41 174.5 474 32.9
Zm00001eb082690 Zea mays HOM05D000113 ORTHO05D005835 8.6e-39 166.0 461 33.0
vmacro01724 Vaccinium macrocarpon HOM05D000113 ORTHO05D005835 3.3e-38 164.1 754 25.3
ATR0626G246 Amborella trichopoda HOM05D000113 ORTHO05D005835 4.3e-38 163.7 292 41.1
ATR0626G234 Amborella trichopoda HOM05D000113 ORTHO05D005835 5.6e-38 163.3 247 43.7
Eucgr.G00347 Eucalyptus grandis HOM05D000113 ORTHO05D005835 7.3e-38 162.9 547 30.9
AL2G17920 Arabidopsis lyrata HOM05D000113 ORTHO05D005835 9.6e-38 162.5 574 29.1
CBR_g34283 Chara braunii HOM05D000113 ORTHO05D005835 4.9e-34 150.2 368 35.9
Hma1.2p1_0427F.1_g150740 Hydrangea macrophylla HOM05D000113 ORTHO05D005835 1.4e-33 148.7 190 46.3
A03p66400 Brassica napus HOM05D000113 ORTHO05D005835 1.1e-30 139.0 544 29.0
QL02p100213 Quercus lobata HOM05D000113 ORTHO05D005835 1.1e-30 139.0 280 35.7
Duzib052G0463 Durio zibethinus HOM05D000113 ORTHO05D005835 7.3e-30 136.3 205 42.4
QL02p100191 Quercus lobata HOM05D000113 ORTHO05D005835 2.8e-29 134.4 173 45.7
BraA03t15696Z Brassica rapa HOM05D000113 ORTHO05D005835 3.6e-29 134.0 544 29.0
BcaC04g22109 Brassica carinata HOM05D000113 ORTHO05D005835 1.1e-28 132.5 192 41.7
Hma1.2p1_0427F.1_g150750 Hydrangea macrophylla HOM05D000113 ORTHO05D005835 1.4e-28 132.1 314 35.4
unitig_26.g9027 Utricularia gibba HOM05D000113 ORTHO05D005835 2.6e-27 127.9 451 30.4
Cpa.g.sc30.39 Carica papaya HOM05D000113 ORTHO05D005835 1.7e-26 125.2 309 32.4
Hund12935 Selenicereus undatus HOM05D008000 ORTHO05D010275 3.0e-23 114.4 312 30.8
CSS0006757 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D005835 8.1e-21 106.3 284 33.5
AUR62041950 Chenopodium quinoa HOM05D000113 ORTHO05D005835 8.1e-21 106.3 139 44.6
Atru.chr6.769 Acer truncatum HOM05D000113 ORTHO05D005835 1.5e-14 85.5 92 47.8
Actinidia10124 Actinidia chinensis HOM05D002653 ORTHO05D005835 2.6e-11 74.7 180 34.4
unitig_26.g9028 Utricularia gibba HOM05D003925 ORTHO05D005835 4.5e-11 73.9 60 56.7
PRCOL_00002902 Prasinoderma coloniale HOM05D000113 ORTHO05D005835 1.0e-10 72.8 537 22.7
Cpa.g.sc30.40 Carica papaya HOM05D000113 ORTHO05D005835 5.1e-07 60.5 105 40.0


User provided reference genes

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