Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10886 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 1.7e-168 595.9 288 100.0
SEGI_40344 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 1.2e-94 350.5 326 58.9
SEGI_08014 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 3.1e-90 335.9 326 57.7
SEGI_00508 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 1.7e-80 303.5 326 54.9
SEGI_35950 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 1.7e-80 303.5 326 54.9
SEGI_01292 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 1.7e-43 180.6 316 37.3
SEGI_26309 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 2.5e-31 140.2 321 31.5
SEGI_15178 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 3.7e-27 126.3 80 76.2
SEGI_33704 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 5.6e-23 112.5 152 43.4
Pp3c3_37320 Physcomitrium patens HOM05D003388 ORTHO05D003616 2.3e-16 90.5 219 29.7
Pp3c16_17020 Physcomitrium patens HOM05D003388 ORTHO05D003616 3.9e-16 89.7 227 28.2
SEGI_01320 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 3.3e-15 86.7 190 34.2
SEGI_02991 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 2.1e-14 84.0 86 48.8
SMO364G0834 Selaginella moellendorffii HOM05D057791 ORTHO05D003616 1.8e-13 80.9 174 32.2
ATR0564G546 Amborella trichopoda HOM05D003388 ORTHO05D003616 1.3e-11 74.7 146 34.9
Pp3c2_8360 Physcomitrium patens HOM05D003388 ORTHO05D003616 2.2e-11 73.9 179 30.7
Ca_18822_v3 Cicer arietinum L. HOM05D003388 ORTHO05D003616 2.9e-11 73.6 113 38.1
Ca_30739_v3 Cicer arietinum L. HOM05D003388 ORTHO05D003616 2.9e-11 73.6 113 38.1
SMO197G0008 Selaginella moellendorffii HOM05D057791 ORTHO05D003616 2.9e-11 73.6 170 31.2
CDE07G1327 Ceratophyllum demersum HOM05D003388 ORTHO05D003616 3.7e-11 73.2 143 32.9
Mapoly0087s0002 Marchantia polymorpha HOM05D003388 ORTHO05D003616 3.7e-11 73.2 147 33.3
FvH4_4g31050 Fragaria vesca HOM05D003388 ORTHO05D003616 1.1e-10 71.6 118 36.4
AUR62005822 Chenopodium quinoa HOM05D003388 ORTHO05D003616 1.4e-10 71.2 116 36.2
unitig_747.g21182 Utricularia gibba HOM05D003388 ORTHO05D003616 2.4e-10 70.5 124 32.3
FAN12G0832 Fragaria x ananassa HOM05D003388 ORTHO05D003616 4.1e-10 69.7 118 35.6
FAN22G1619 Fragaria x ananassa HOM05D003388 ORTHO05D003616 4.1e-10 69.7 118 35.6
Mapoly0052s0121 Marchantia polymorpha HOM05D003388 ORTHO05D003616 4.1e-10 69.7 137 33.6
Psat7g160040 Pisum sativum HOM05D003388 ORTHO05D003616 4.1e-10 69.7 112 38.4
Aqoxy3G03455 Aquilegia oxysepala HOM05D003388 ORTHO05D003616 7.1e-10 68.9 143 30.8
CARHR025200 Cardamine hirsuta HOM05D003388 ORTHO05D003616 7.1e-10 68.9 140 30.7
BcaC05g26390 Brassica carinata HOM05D003388 ORTHO05D003616 9.2e-10 68.6 125 32.8
C05p24210 Brassica napus HOM05D003388 ORTHO05D003616 9.2e-10 68.6 125 32.8
BolC5t31157H Brassica oleracea HOM05D003388 ORTHO05D003616 1.2e-09 68.2 125 32.8
Cc11_g12730 Coffea canephora HOM05D003388 ORTHO05D003616 1.2e-09 68.2 76 43.4
SMO137G0302 Selaginella moellendorffii HOM05D003388 ORTHO05D003616 1.2e-09 68.2 199 29.1
CAN.G1335.17 Capsicum annuum HOM05D003388 ORTHO05D003616 1.6e-09 67.8 111 36.0
Dinv34132 Davidia involucrata HOM05D003388 ORTHO05D003616 1.6e-09 67.8 99 36.4
RcHm_v2.0_Chr4g0439431 Rosa chinensis HOM05D003388 ORTHO05D003616 1.6e-09 67.8 118 34.7
SEGI_35589 Sequoiadendron giganteum HOM05D003388 ORTHO05D031231 1.6e-09 67.8 104 38.5
AUR62032817 Chenopodium quinoa HOM05D003388 ORTHO05D003616 2.7e-09 67.0 115 35.7
MBI13_g11342_MAGBIO Magnolia biondii HOM05D003388 ORTHO05D003616 2.7e-09 67.0 116 34.5
Phvul.002G170100 Phaseolus vulgaris HOM05D003388 ORTHO05D003616 2.7e-09 67.0 112 37.5
SEGI_24693 Sequoiadendron giganteum HOM05D003388 ORTHO05D003616 3.5e-09 66.6 148 33.1
Nitab4.5_0000040g0070 Nicotiana tabacum HOM05D003388 ORTHO05D003616 4.6e-09 66.2 103 36.9
Atru.chr11.1747 Acer truncatum HOM05D003388 ORTHO05D003616 7.8e-09 65.5 143 30.8
MSTRG.7787 Avicennia marina HOM05D003388 ORTHO05D003616 7.8e-09 65.5 130 31.5
EL10Ac6g13243 Beta vulgaris HOM05D003388 ORTHO05D003616 7.8e-09 65.5 114 32.5
MD13G1069000 Malus domestica HOM05D003388 ORTHO05D003616 7.8e-09 65.5 119 31.9
Actinidia33214 Actinidia chinensis HOM05D003388 ORTHO05D003616 1.0e-08 65.1 103 35.0
CANSAT64G0380 Cannabis sativa HOM05D003388 ORTHO05D003616 1.0e-08 65.1 113 31.9
Lj4g0011095 Lotus japonicus HOM05D003388 ORTHO05D003616 1.0e-08 65.1 112 35.7
Manes.01G034100 Manihot esculenta HOM05D003388 ORTHO05D003616 1.0e-08 65.1 115 30.4
Medtr4g082140 Medicago truncatula HOM05D003388 ORTHO05D003616 1.0e-08 65.1 112 35.7
PGSC0003DMG400018436 Solanum tuberosum HOM05D003388 ORTHO05D003616 1.0e-08 65.1 112 35.7
Ciclev10031048m.g Citrus clementina HOM05D003388 ORTHO05D003616 1.3e-08 64.7 139 30.2
Lj3P1035T24 Lonicera japonica HOM05D003388 ORTHO05D003616 1.3e-08 64.7 115 29.6
Oeu005759.1 Olea europaea HOM05D003388 ORTHO05D003616 1.3e-08 64.7 121 31.4
TAR629G0929 Trochodendron aralioides HOM05D003388 ORTHO05D003616 1.3e-08 64.7 68 44.1
AL1G38950 Arabidopsis lyrata HOM05D003388 ORTHO05D003616 1.7e-08 64.3 122 31.1
AT1G26760 Arabidopsis thaliana HOM05D003388 ORTHO05D003616 1.7e-08 64.3 137 28.5
AagrBONN_evm.TU.Sc2ySwM_362.800 Anthoceros agrestis HOM05D003388 ORTHO05D003616 2.3e-08 63.9 188 29.8
Carub.0001s2426 Capsella rubella HOM05D003388 ORTHO05D003616 2.3e-08 63.9 137 28.5
Mapoly0048s0091 Marchantia polymorpha HOM05D003388 ORTHO05D003616 2.3e-08 63.9 74 43.2
Mapoly0063s0022 Marchantia polymorpha HOM05D003388 ORTHO05D003616 2.3e-08 63.9 150 30.0
Sopen05g003620 Solanum pennellii HOM05D003388 ORTHO05D003616 2.3e-08 63.9 112 34.8
SGA_v2.0_scaffold172G38951 Striga asiatica HOM05D004340 ORTHO05D006363 2.3e-08 63.9 121 34.7
CiPaw.05G131500 Carya illinoinensis HOM05D003388 ORTHO05D003616 3.0e-08 63.5 112 32.1
DCAR_007170 Daucus carota HOM05D003388 ORTHO05D003616 3.0e-08 63.5 99 34.3
Duzib251G0885 Durio zibethinus HOM05D003388 ORTHO05D003616 3.0e-08 63.5 114 32.5
Thhalv10007288m.g Eutrema salsugineum HOM05D003388 ORTHO05D003616 3.0e-08 63.5 122 30.3
Prupe.1G278000 Prunus persica HOM05D003388 ORTHO05D003616 3.0e-08 63.5 118 32.2
VMungo0251G1426 Vigna mungo HOM05D003388 ORTHO05D003616 3.0e-08 63.5 118 34.7
CiPaw.05G132000 Carya illinoinensis HOM05D003388 ORTHO05D003616 5.1e-08 62.8 112 32.1
COL.COLO4_27999 Corchorus olitorius HOM05D003388 ORTHO05D003616 5.1e-08 62.8 117 31.6
Duzib248G0503 Durio zibethinus HOM05D003388 ORTHO05D003616 5.1e-08 62.8 120 30.0
Mapoly0045s0135 Marchantia polymorpha HOM05D003388 ORTHO05D003616 5.1e-08 62.8 138 33.3
Cfa008954 Carpinus fangiana HOM05D003388 ORTHO05D003616 6.6e-08 62.4 118 31.4
Mapoly0058s0063 Marchantia polymorpha HOM05D003388 ORTHO05D003616 6.6e-08 62.4 202 28.2
Nitab4.5_0004300g0010 Nicotiana tabacum HOM05D003388 ORTHO05D003616 8.6e-08 62.0 103 35.0
Pp3c1_34190 Physcomitrium patens HOM05D003388 ORTHO05D003616 8.6e-08 62.0 134 32.8
Thecc.02G342400 Theobroma cacao HOM05D003388 ORTHO05D003616 8.6e-08 62.0 101 35.6
A09p40170 Brassica napus HOM05D003388 ORTHO05D003616 1.1e-07 61.6 135 30.4
Lsat_1_v5_gn_8_50121 Lactuca sativa HOM05D003388 ORTHO05D003616 1.1e-07 61.6 95 34.7
Potri.008G089500 Populus trichocarpa HOM05D003388 ORTHO05D003616 1.1e-07 61.6 106 32.1
Sabra08G0066900 Salix brachista HOM05D003388 ORTHO05D003616 1.1e-07 61.6 68 44.1
Solyc05g007760.2 Solanum lycopersicum HOM05D003388 ORTHO05D003616 1.1e-07 61.6 112 33.9
Lalb_Chr09g0329211 Lupinus albus HOM05D003388 ORTHO05D003616 1.5e-07 61.2 112 33.9
Mapoly0009s0129 Marchantia polymorpha HOM05D003388 ORTHO05D003616 1.5e-07 61.2 138 31.2
Pp3c17_14770 Physcomitrium patens HOM05D003388 ORTHO05D003616 1.5e-07 61.2 141 32.6
QL03p068106 Quercus lobata HOM05D003388 ORTHO05D003616 1.5e-07 61.2 113 33.6
Ah.03g134820 Amaranthus hybridus HOM05D003388 ORTHO05D003616 1.9e-07 60.8 68 42.6
Eucgr.B03207 Eucalyptus grandis HOM05D003388 ORTHO05D003616 1.9e-07 60.8 143 26.6
Mapoly0033s0081 Marchantia polymorpha HOM05D003388 ORTHO05D003616 1.9e-07 60.8 138 31.2
Nn3g17299 Nelumbo nucifera HOM05D003388 ORTHO05D003616 1.9e-07 60.8 131 30.5
Migut.N01400 Erythranthe guttata HOM05D003388 ORTHO05D003616 2.5e-07 60.5 101 36.6
Glyma.07G229200 Glycine max HOM05D003388 ORTHO05D003616 2.5e-07 60.5 116 34.5
PSO013G0084 Papaver somniferum HOM05D003388 ORTHO05D003616 2.5e-07 60.5 103 30.1
BraA09t39515Z Brassica rapa HOM05D003388 ORTHO05D003616 3.3e-07 60.1 135 29.6
PSO832G3938 Papaver somniferum HOM05D003388 ORTHO05D003616 3.3e-07 60.1 106 31.1
Rhsim10G0115600 Rhododendron simsii HOM05D003388 ORTHO05D003616 3.3e-07 60.1 105 31.4
SMO167G0022 Selaginella moellendorffii HOM05D051167 ORTHO05D003616 3.3e-07 60.1 133 33.1
SEGI_13898 Sequoiadendron giganteum HOM05D003388 ORTHO05D031231 3.3e-07 60.1 98 34.7
Sc14g0008080 Simmondsia chinensis HOM05D003388 ORTHO05D003616 4.3e-07 59.7 109 31.2
AagrBONN_evm.TU.Sc2ySwM_362.802 Anthoceros agrestis HOM05D003388 ORTHO05D003616 5.6e-07 59.3 169 31.4
ClCG05G024100 Citrullus lanatus HOM05D003388 ORTHO05D003616 5.6e-07 59.3 112 28.6
Haze_11983 Corylus avellana HOM05D003388 ORTHO05D003616 5.6e-07 59.3 112 31.2
MELO3C012115.2 Cucumis melo HOM05D003388 ORTHO05D003616 7.3e-07 58.9 112 29.5
Gohir.D13G076800 Gossypium hirsutum HOM05D003388 ORTHO05D003616 7.3e-07 58.9 98 34.7
Hma1.2p1_1079F.1_g254900 Hydrangea macrophylla HOM05D003388 ORTHO05D003616 7.3e-07 58.9 103 35.9
Gorai.013G087800 Gossypium raimondii HOM05D003388 ORTHO05D003616 9.5e-07 58.5 98 34.7
SalBow2G1725 Salvia bowleyana HOM05D003388 ORTHO05D003616 9.5e-07 58.5 113 29.2
THA.LOC104803358 Tarenaya hassleriana HOM05D003388 ORTHO05D003616 9.5e-07 58.5 114 29.8
Migut.L01268 Erythranthe guttata HOM05D003388 ORTHO05D003616 1.2e-06 58.2 75 41.3
PGR102G2155 Punica granatum HOM05D003388 ORTHO05D003616 1.2e-06 58.2 124 30.6
TWI75G1739 Tripterygium wilfordii HOM05D003388 ORTHO05D003616 1.2e-06 58.2 67 40.3
HanXRQChr08g0210711 Helianthus annuus HOM05D003388 ORTHO05D003616 1.6e-06 57.8 76 36.8
Sp1g22050 Schrenkiella parvula HOM05D003388 ORTHO05D003616 1.6e-06 57.8 76 35.5
Sed0018691 Sechium edule HOM05D003388 ORTHO05D003616 1.6e-06 57.8 112 29.5
AagrBONN_evm.TU.Sc2ySwM_368.1893 Anthoceros agrestis HOM05D003388 ORTHO05D003616 2.8e-06 57.0 119 33.6
CsaV3_5G032950 Cucumis sativus L. HOM05D003388 ORTHO05D003616 2.8e-06 57.0 112 28.6
AagrBONN_evm.TU.Sc2ySwM_228.5463 Anthoceros agrestis HOM05D003388 ORTHO05D003616 3.6e-06 56.6 172 29.1
SMO119G0318 Selaginella moellendorffii HOM05D051167 ORTHO05D003616 3.6e-06 56.6 173 29.5
GSVIVG01012615001 Vitis vinifera HOM05D003388 ORTHO05D003616 3.6e-06 56.6 103 34.0
HanXRQChr08g0210721 Helianthus annuus HOM05D003388 ORTHO05D003616 4.7e-06 56.2 64 39.1
MD06G1227100 Malus domestica HOM05D001310 ORTHO05D001283 6.2e-06 55.8 118 33.1


User provided reference genes

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