Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10836 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.7e-196 688.0 336 100.0
SEGI_12986 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.0e-116 424.1 338 66.9
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.0e-100 368.6 239 77.8
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.0e-100 368.6 239 77.8
SEGI_26119 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-92 343.6 229 76.0
SEGI_41100 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-84 317.0 224 72.3
SEGI_10162 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.2e-66 255.4 165 75.8
SEGI_20620 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.4e-62 244.2 161 76.4
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 3.5e-61 239.6 176 68.2
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.5e-59 233.4 158 72.8
SEGI_01451 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.6e-59 231.5 141 79.4
SEGI_17593 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.2e-56 224.6 136 78.7
SEGI_21703 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.0e-53 212.2 158 67.7
SEGI_02603 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-49 201.4 149 66.4
SEGI_22494 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.8e-49 200.7 126 78.6
SEGI_18317 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-41 174.9 105 80.0
SEGI_24255 Sequoiadendron giganteum HOM05D000018 ORTHO05D003948 1.2e-40 171.4 105 75.2
SEGI_00259 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.8e-39 166.4 105 77.1
SEGI_32072 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.0e-39 166.0 110 74.5
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 6.5e-39 165.6 247 40.1
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.5e-39 165.6 110 78.2
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 8.4e-39 165.2 233 40.3
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 8.4e-39 165.2 249 37.8
SEGI_37860 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-37 161.0 103 72.8
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 2.1e-37 160.6 250 38.8
SEGI_23236 Sequoiadendron giganteum HOM05D003580 ORTHO05D000001 7.9e-37 158.7 105 71.4
SEGI_13143 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.3e-36 157.1 102 78.4
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 2.5e-35 153.7 252 36.5
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 2.5e-35 153.7 252 36.5
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 3.3e-35 153.3 249 36.1
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 5.7e-35 152.5 251 35.9
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 7.4e-35 152.1 240 36.7
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 3.7e-34 149.8 215 39.5
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 3.7e-34 149.8 236 36.9
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 4.8e-34 149.4 253 37.2
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 6.3e-34 149.1 150 48.7
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 8.2e-34 148.7 251 38.2
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 8.2e-34 148.7 249 35.3
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 8.2e-34 148.7 249 34.5
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 1.1e-33 148.3 251 37.8
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 1.4e-33 147.9 150 46.0
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 1.4e-33 147.9 270 33.3
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 1.8e-33 147.5 215 40.0
SEGI_00546 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.1e-33 146.7 113 65.5
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 3.1e-33 146.7 150 46.0
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 4.1e-33 146.4 150 46.0
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 4.1e-33 146.4 251 37.8
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 6.9e-33 145.6 140 47.9
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 6.9e-33 145.6 249 34.5
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 2.6e-32 143.7 257 35.0
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 2.6e-32 143.7 149 45.6
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 3.4e-32 143.3 251 35.5
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 4.5e-32 142.9 256 34.8
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 4.5e-32 142.9 150 46.0
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 5.9e-32 142.5 150 44.7
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 5.9e-32 142.5 257 34.6
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 7.7e-32 142.1 250 36.4
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 1.0e-31 141.7 143 45.5
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 1.3e-31 141.4 249 36.1
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 1.3e-31 141.4 273 33.0
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 1.7e-31 141.0 150 45.3
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 1.7e-31 141.0 150 45.3
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 2.2e-31 140.6 257 35.4
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 2.2e-31 140.6 252 33.3
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 2.2e-31 140.6 257 34.2
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 2.2e-31 140.6 150 43.3
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 2.9e-31 140.2 150 43.3
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 2.9e-31 140.2 257 34.6
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 2.9e-31 140.2 150 44.7
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 2.9e-31 140.2 150 45.3
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 3.8e-31 139.8 250 33.6
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 3.8e-31 139.8 149 47.7
SEGI_07846 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.8e-31 139.8 84 81.0
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 3.8e-31 139.8 295 33.6
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 5.0e-31 139.4 150 45.3
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 5.0e-31 139.4 257 33.5
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 5.0e-31 139.4 150 44.0
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 5.0e-31 139.4 150 45.3
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 6.5e-31 139.0 150 46.0
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 6.5e-31 139.0 142 45.8
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 6.5e-31 139.0 150 45.3
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 6.5e-31 139.0 249 34.1
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 6.5e-31 139.0 247 34.0
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 6.5e-31 139.0 150 44.7
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 8.5e-31 138.7 150 44.0
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 8.5e-31 138.7 150 44.7
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.1e-30 138.3 252 33.7
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 1.1e-30 138.3 149 45.6
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 1.1e-30 138.3 149 43.6
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 1.4e-30 137.9 249 32.5
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 1.4e-30 137.9 257 34.2
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 1.4e-30 137.9 226 35.0
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 2.5e-30 137.1 150 44.0
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 2.5e-30 137.1 150 45.3
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.5e-30 137.1 150 45.3
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 2.5e-30 137.1 241 34.0
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 2.5e-30 137.1 150 44.0
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 3.2e-30 136.7 142 46.5
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 3.2e-30 136.7 149 47.0
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 5.5e-30 136.0 150 44.7
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 5.5e-30 136.0 142 45.1
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 5.5e-30 136.0 149 45.0
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 5.5e-30 136.0 150 43.3
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 5.5e-30 136.0 149 42.3
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 9.4e-30 135.2 150 43.3
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 9.4e-30 135.2 149 42.3
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 9.4e-30 135.2 241 33.6
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 1.2e-29 134.8 142 45.8
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 1.2e-29 134.8 149 41.6
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 1.2e-29 134.8 150 42.7
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.6e-29 134.4 150 44.0
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 1.6e-29 134.4 150 43.3
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 2.1e-29 134.0 142 44.4
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 2.1e-29 134.0 146 41.8
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 2.7e-29 133.7 150 42.0
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 2.7e-29 133.7 150 42.0
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 2.7e-29 133.7 149 41.6
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 2.7e-29 133.7 150 42.7
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.7e-29 133.7 150 44.0
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 2.7e-29 133.7 231 34.6
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 4.6e-29 132.9 142 44.4
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 4.6e-29 132.9 150 43.3
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 4.6e-29 132.9 150 43.3
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 4.6e-29 132.9 150 43.3
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 4.6e-29 132.9 150 43.3
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 4.6e-29 132.9 251 34.3
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 6.1e-29 132.5 142 45.1
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 6.1e-29 132.5 251 34.3
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 7.9e-29 132.1 150 40.0
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 7.9e-29 132.1 155 43.2
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 1.0e-28 131.7 150 40.7
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 1.8e-28 131.0 150 42.0
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 1.8e-28 131.0 142 44.4
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 1.8e-28 131.0 142 44.4
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 2.3e-28 130.6 250 32.4
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 5.1e-28 129.4 142 41.5
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 8.8e-28 128.6 142 44.4
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 2.0e-27 127.5 195 37.4
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 2.0e-27 127.5 131 44.3
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 2.5e-27 127.1 142 42.3
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 3.3e-27 126.7 142 42.3
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 3.3e-27 126.7 238 32.4
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 9.7e-27 125.2 142 42.3
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 9.7e-27 125.2 142 42.3
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 1.5e-24 117.9 150 40.7
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 3.4e-24 116.7 220 35.5
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 6.5e-23 112.5 154 37.7
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 6.5e-23 112.5 151 37.7
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 1.9e-22 110.9 152 39.5
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 4.2e-22 109.8 207 34.8
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 2.1e-21 107.5 152 37.5
SEGI_40445 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.3e-17 92.8 58 79.3
Atru.chr10.123 Acer truncatum HOM05D003580 ORTHO05D004441 2.5e-14 84.0 88 45.5
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 5.3e-09 66.2 63 42.9
SEGI_06299 Sequoiadendron giganteum HOM05D003580 ORTHO05D019257 5.3e-09 66.2 41 80.5
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 2.5e-06 57.4 50 44.0


User provided reference genes

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