Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10787 Sequoiadendron giganteum HOM05D002332 ORTHO05D002509 2.3e-105 385.6 192 100.0
SEGI_17299 Sequoiadendron giganteum HOM05D002332 ORTHO05D002509 1.4e-78 296.6 147 100.0
Mapoly0003s0009 Marchantia polymorpha HOM05D002332 ORTHO05D002509 5.9e-37 158.3 182 52.7
SMO143G0197 Selaginella moellendorffii HOM05D002332 ORTHO05D002509 5.9e-37 158.3 194 49.5
ATR0021G051 Amborella trichopoda HOM05D002332 ORTHO05D002509 2.0e-32 143.3 167 50.9
GSVIVG01009478001 Vitis vinifera HOM05D002332 ORTHO05D002509 4.5e-29 132.1 166 44.6
Actinidia23289 Actinidia chinensis HOM05D002332 ORTHO05D002509 6.5e-28 128.3 170 41.8
QL02p004496 Quercus lobata HOM05D002332 ORTHO05D002509 1.9e-27 126.7 165 42.4
QL06p048778 Quercus lobata HOM05D002332 ORTHO05D002509 1.9e-27 126.7 165 42.4
Cc10_g04520 Coffea canephora HOM05D002332 ORTHO05D002509 3.2e-27 125.9 178 39.3
Lj4A60G15 Lonicera japonica HOM05D002332 ORTHO05D002509 5.5e-27 125.2 166 42.2
Hma1.2p1_0360F.1_g135610 Hydrangea macrophylla HOM05D002332 ORTHO05D002509 1.6e-26 123.6 170 42.4
MBI08_g39927_MAGBIO Magnolia biondii HOM05D002332 ORTHO05D002509 2.1e-26 123.2 171 43.3
Thecc.08G005100 Theobroma cacao HOM05D002332 ORTHO05D002509 2.1e-26 123.2 165 44.2
DCAR_011828 Daucus carota HOM05D002332 ORTHO05D002509 2.7e-26 122.9 167 42.5
MBI03_g26569_MAGBIO Magnolia biondii HOM05D002332 ORTHO05D002509 1.0e-25 120.9 171 42.1
Pp3c18_8470 Physcomitrium patens HOM05D002332 ORTHO05D002509 1.0e-25 120.9 177 46.9
TAR625G1294 Trochodendron aralioides HOM05D002332 ORTHO05D002509 1.0e-25 120.9 167 42.5
vmacro21505 Vaccinium macrocarpon HOM05D002332 ORTHO05D002509 4.0e-25 119.0 175 43.4
FAN15G0333 Fragaria x ananassa HOM05D002332 ORTHO05D002509 5.2e-25 118.6 168 39.3
FAN20G1644 Fragaria x ananassa HOM05D002332 ORTHO05D002509 5.2e-25 118.6 168 39.3
FAN27G1527 Fragaria x ananassa HOM05D002332 ORTHO05D002509 6.8e-25 118.2 168 39.3
Rhsim06G0051400 Rhododendron simsii HOM05D002332 ORTHO05D002509 8.8e-25 117.9 176 42.6
TWI36G1206 Tripterygium wilfordii HOM05D002332 ORTHO05D002509 8.8e-25 117.9 166 41.0
HPP92_010732 Vanilla planifolia HOM05D002332 ORTHO05D002509 1.2e-24 117.5 162 41.4
Haze_18030 Corylus avellana HOM05D002332 ORTHO05D002509 1.5e-24 117.1 163 38.0
Nitab4.5_0003677g0020 Nicotiana tabacum HOM05D002332 ORTHO05D002509 2.0e-24 116.7 169 42.6
Peaxi162Scf00458g00325 Petunia axillaris HOM05D002332 ORTHO05D002509 2.6e-24 116.3 170 40.0
CsaV3_4G034460 Cucumis sativus L. HOM05D002332 ORTHO05D002509 3.4e-24 115.9 167 41.9
RcHm_v2.0_Chr6g0308111 Rosa chinensis HOM05D002332 ORTHO05D002509 3.4e-24 115.9 168 38.1
FAN24G2812 Fragaria x ananassa HOM05D002332 ORTHO05D002509 4.4e-24 115.5 168 38.7
MSTRG.25068 Avicennia marina HOM05D002332 ORTHO05D002509 5.7e-24 115.2 168 37.5
Ciclev10001126m.g Citrus clementina HOM05D002332 ORTHO05D002509 5.7e-24 115.2 177 40.7
HanXRQChr16g0511391 Helianthus annuus HOM05D002332 ORTHO05D002509 5.7e-24 115.2 166 39.2
Prupe.1G433800 Prunus persica HOM05D002332 ORTHO05D002509 5.7e-24 115.2 178 37.6
ClCG05G019990 Citrullus lanatus HOM05D002332 ORTHO05D002509 7.5e-24 114.8 167 41.9
Nitab4.5_0000287g0170 Nicotiana tabacum HOM05D002332 ORTHO05D002509 9.8e-24 114.4 171 41.5
Oeu012425.1 Olea europaea HOM05D002332 ORTHO05D002509 1.3e-23 114.0 168 39.3
Ah.13g075040 Amaranthus hybridus HOM05D002332 ORTHO05D002509 1.7e-23 113.6 169 36.7
COL.COLO4_26530 Corchorus olitorius HOM05D002332 ORTHO05D002509 1.7e-23 113.6 165 36.4
Migut.C00568 Erythranthe guttata HOM05D002332 ORTHO05D002509 2.2e-23 113.2 166 38.6
Phvul.005G107100 Phaseolus vulgaris HOM05D002332 ORTHO05D002509 2.2e-23 113.2 172 39.0
FvH4_2g34270 Fragaria vesca HOM05D002332 ORTHO05D002509 2.8e-23 112.8 168 39.3
Ah.13g075150 Amaranthus hybridus HOM05D002332 ORTHO05D002509 3.7e-23 112.5 169 35.5
Ca_12501_v3 Cicer arietinum L. HOM05D002332 ORTHO05D002509 4.8e-23 112.1 176 39.2
Ca_25727_v3 Cicer arietinum L. HOM05D002332 ORTHO05D002509 4.8e-23 112.1 176 39.2
Gohir.A06G019300 Gossypium hirsutum HOM05D002332 ORTHO05D002509 4.8e-23 112.1 159 39.6
Nn4g24734 Nelumbo nucifera HOM05D002332 ORTHO05D002509 6.3e-23 111.7 168 39.9
Solyc04g078780.3 Solanum lycopersicum HOM05D002332 ORTHO05D002509 6.3e-23 111.7 171 39.2
Sopen04g032380 Solanum pennellii HOM05D002332 ORTHO05D002509 6.3e-23 111.7 171 38.6
Dinv39304 Davidia involucrata HOM05D002332 ORTHO05D002509 8.3e-23 111.3 163 39.9
ECA246G3545 Erigeron canadensis HOM05D002332 ORTHO05D002509 8.3e-23 111.3 166 39.8
Gorai.010G020600 Gossypium raimondii HOM05D002332 ORTHO05D002509 8.3e-23 111.3 159 40.9
CiPaw.05G179300 Carya illinoinensis HOM05D002332 ORTHO05D002509 1.1e-22 110.9 158 39.9
Medtr1g034785 Medicago truncatula HOM05D002332 ORTHO05D002509 1.1e-22 110.9 167 38.3
Sed0026906 Sechium edule HOM05D002332 ORTHO05D002509 1.1e-22 110.9 165 42.4
EL10Ac3g06747 Beta vulgaris HOM05D002332 ORTHO05D002509 1.4e-22 110.5 159 37.1
MELO3C016764.2 Cucumis melo HOM05D002332 ORTHO05D002509 1.4e-22 110.5 164 40.2
Duzib093G1319 Durio zibethinus HOM05D002332 ORTHO05D002509 1.8e-22 110.2 165 37.6
SGA_v2.0_scaffold62G21510 Striga asiatica HOM05D002332 ORTHO05D002509 1.8e-22 110.2 164 39.0
Cfa018082 Carpinus fangiana HOM05D002332 ORTHO05D002509 2.4e-22 109.8 172 39.0
Nn1g04830 Nelumbo nucifera HOM05D002332 ORTHO05D002509 3.1e-22 109.4 166 38.6
AUR62035333 Chenopodium quinoa HOM05D002332 ORTHO05D002509 4.1e-22 109.0 159 39.6
PSO541G3218 Papaver somniferum HOM05D002332 ORTHO05D002509 5.4e-22 108.6 170 40.0
Phvul.005G174300 Phaseolus vulgaris HOM05D002332 ORTHO05D002509 7.0e-22 108.2 172 37.2
Potri.014G027200 Populus trichocarpa HOM05D002332 ORTHO05D002509 7.0e-22 108.2 168 37.5
Sabra14G0018600 Salix brachista HOM05D002332 ORTHO05D002509 7.0e-22 108.2 168 36.9
Lj1g0004747 Lotus japonicus HOM05D002332 ORTHO05D002509 9.1e-22 107.8 173 36.4
MD15G1081000 Malus domestica HOM05D002332 ORTHO05D002509 9.1e-22 107.8 165 41.2
Eucgr.F02332 Eucalyptus grandis HOM05D002332 ORTHO05D002509 1.2e-21 107.5 161 42.9
PSO675G4923 Papaver somniferum HOM05D002332 ORTHO05D002509 1.2e-21 107.5 170 39.4
Psat0s4552g0080 Pisum sativum HOM05D002332 ORTHO05D002509 1.2e-21 107.5 163 37.4
THA.LOC104798895 Tarenaya hassleriana HOM05D002332 ORTHO05D002509 1.2e-21 107.5 163 39.9
Phvul.008G025800 Phaseolus vulgaris HOM05D002332 ORTHO05D002509 2.0e-21 106.7 172 37.8
Cpa.g.sc65.26 Carica papaya HOM05D002332 ORTHO05D002509 2.7e-21 106.3 167 35.3
AUR62035906 Chenopodium quinoa HOM05D002332 ORTHO05D002509 3.5e-21 105.9 161 40.4
VMungo1383G1987 Vigna mungo HOM05D002332 ORTHO05D002509 3.5e-21 105.9 172 37.2
Lj5g0014115 Lotus japonicus HOM05D002332 ORTHO05D002509 4.5e-21 105.5 176 36.4
Lalb_Chr17g0336781 Lupinus albus HOM05D002332 ORTHO05D002509 5.9e-21 105.1 170 37.6
Glyma.18G275100 Glycine max HOM05D002332 ORTHO05D002509 7.7e-21 104.8 176 37.5
TPR.G40412 Trifolium pratense HOM05D002332 ORTHO05D002509 1.0e-20 104.4 167 35.3
Glyma.08G252500 Glycine max HOM05D002332 ORTHO05D002509 2.9e-20 102.8 173 36.4
arahy.Tifrunner.gnm1.ann1.IZUT4R Arachis hypogaea HOM05D002332 ORTHO05D002509 1.1e-19 100.9 174 33.3
Lsat_1_v5_gn_6_115620 Lactuca sativa HOM05D002332 ORTHO05D002509 1.5e-19 100.5 194 35.1
Medtr7g016970 Medicago truncatula HOM05D002332 ORTHO05D002509 1.5e-19 100.5 169 34.9
Ah.13g071810 Amaranthus hybridus HOM05D002332 ORTHO05D002509 1.9e-19 100.1 175 35.4
Sc02g0007250 Simmondsia chinensis HOM05D002332 ORTHO05D002509 1.9e-19 100.1 164 36.0
Thhalv10010392m.g Eutrema salsugineum HOM05D002332 ORTHO05D002509 4.2e-19 99.0 161 38.5
TPR.G23391 Trifolium pratense HOM05D002332 ORTHO05D002509 4.2e-19 99.0 162 35.8
CANSAT64G1916 Cannabis sativa HOM05D002332 ORTHO05D002509 5.5e-19 98.6 156 38.5
A01p24930 Brassica napus HOM05D002332 ORTHO05D002509 9.5e-19 97.8 163 36.8
BcaB05g22960 Brassica carinata HOM05D002332 ORTHO05D002509 1.2e-18 97.4 165 37.6
BraA01t02404Z Brassica rapa HOM05D002332 ORTHO05D002509 1.2e-18 97.4 163 36.8
BcaC09g49926 Brassica carinata HOM05D002332 ORTHO05D002509 1.6e-18 97.1 163 36.8
Manes.18G038500 Manihot esculenta HOM05D002332 ORTHO05D002509 2.1e-18 96.7 167 35.9
C01p31140 Brassica napus HOM05D002332 ORTHO05D002509 3.6e-18 95.9 163 36.2
BolC1t03049H Brassica oleracea HOM05D002332 ORTHO05D002509 3.6e-18 95.9 163 36.2
Carub.0005s1541 Capsella rubella HOM05D002332 ORTHO05D002509 8.0e-18 94.7 165 37.6
CDE05G3079 Ceratophyllum demersum HOM05D002332 ORTHO05D002509 1.4e-17 94.0 163 37.4
Aqoxy6G00898 Aquilegia oxysepala HOM05D002332 ORTHO05D002509 1.8e-17 93.6 171 37.4
SalBow7G2328 Salvia bowleyana HOM05D002332 ORTHO05D002509 4.0e-17 92.4 180 30.0
PGR031G1323 Punica granatum HOM05D002332 ORTHO05D002509 8.9e-17 91.3 161 37.3
BcaB01g00739 Brassica carinata HOM05D002332 ORTHO05D002509 1.2e-16 90.9 166 36.7
AT3G49180 Arabidopsis thaliana HOM05D002332 ORTHO05D002509 1.5e-16 90.5 165 38.8
Sp5g12890 Schrenkiella parvula HOM05D002332 ORTHO05D002509 1.5e-16 90.5 158 37.3
CARHR158060 Cardamine hirsuta HOM05D002332 ORTHO05D002509 4.9e-15 85.5 167 35.9
C08p24150 Brassica napus HOM05D002332 ORTHO05D002509 8.3e-15 84.7 166 36.1
BolC8t50036H Brassica oleracea HOM05D002332 ORTHO05D002509 8.3e-15 84.7 166 36.1
BcaC07g39390 Brassica carinata HOM05D002332 ORTHO05D002509 1.8e-14 83.6 166 35.5
AagrBONN_evm.TU.Sc2ySwM_368.1299 Anthoceros agrestis HOM05D002332 ORTHO05D002509 2.4e-14 83.2 120 43.3
Atru.chr13.711 Acer truncatum HOM05D002332 ORTHO05D002509 9.2e-14 81.3 235 26.8
AL5G28900 Arabidopsis lyrata HOM05D002332 ORTHO05D002509 9.2e-14 81.3 164 36.0
SHI08262 Sapria himalayana HOM05D002332 ORTHO05D002509 9.2e-14 81.3 161 34.2
Aa31LG4G17610 Aethionema arabicum HOM05D002332 ORTHO05D002509 1.5e-11 73.9 161 32.3
Aa31LG10G9730 Aethionema arabicum HOM05D002332 ORTHO05D002509 3.3e-11 72.8 161 33.5
PSO782G4442 Papaver somniferum HOM05D002332 ORTHO05D002509 5.6e-11 72.0 131 35.1
PSO063G0438 Papaver somniferum HOM05D002332 ORTHO05D002509 6.1e-10 68.6 131 34.4
SEGI_03690 Sequoiadendron giganteum HOM05D002332 ORTHO05D002509 1.4e-09 67.4 187 28.9
SEGI_26272 Sequoiadendron giganteum HOM05D002332 ORTHO05D002509 1.4e-09 67.4 187 28.9
CiPaw.16G042300 Carya illinoinensis HOM05D002332 ORTHO05D002509 1.5e-08 63.9 80 42.5
Aa31LG8G4250 Aethionema arabicum HOM05D002332 ORTHO05D002509 7.5e-08 61.6 163 31.9
Aqoxy3G04079 Aquilegia oxysepala HOM05D002332 ORTHO05D002509 2.2e-07 60.1 134 31.3
DCAR_016406 Daucus carota HOM05D002332 ORTHO05D002509 2.2e-07 60.1 196 28.6
PGSC0003DMG400007963 Solanum tuberosum HOM05D002332 ORTHO05D002509 2.9e-07 59.7 180 29.4
FAN08G0156 Fragaria x ananassa HOM05D002332 ORTHO05D002509 4.9e-07 58.9 130 30.8
Os07g0408100 Oryza sativa ssp. japonica HOM05D002332 ORTHO05D002509 6.4e-07 58.5 48 50.0
Zm00001eb296150 Zea mays HOM05D002332 ORTHO05D002509 6.4e-07 58.5 48 56.2
MD06G1143900 Malus domestica HOM05D002332 ORTHO05D002509 8.3e-07 58.2 149 26.8
Nn4g22378 Nelumbo nucifera HOM05D002332 ORTHO05D002509 1.4e-06 57.4 130 31.5
MBI08_g34939_MAGBIO Magnolia biondii HOM05D002332 ORTHO05D002509 1.9e-06 57.0 131 29.8
Lsat_1_v5_gn_8_164101 Lactuca sativa HOM05D002332 ORTHO05D002509 3.2e-06 56.2 42 50.0
MD14G1159200 Malus domestica HOM05D002332 ORTHO05D002509 3.2e-06 56.2 77 31.2
Cfa018843 Carpinus fangiana HOM05D002332 ORTHO05D002509 5.4e-06 55.5 130 27.7
ATR0686G098 Amborella trichopoda HOM05D002332 ORTHO05D002509 7.0e-06 55.1 135 32.6
SEGI_05634 Sequoiadendron giganteum HOM05D002332 ORTHO05D002509 7.0e-06 55.1 119 32.8
Potri.015G093300 Populus trichocarpa HOM05D002332 ORTHO05D002509 9.2e-06 54.7 129 31.0
Prupe.5G153000 Prunus persica HOM05D002332 ORTHO05D002509 9.2e-06 54.7 124 31.5


User provided reference genes

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