Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10738 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 6.5e-131 470.7 231 100.0
ATR0580G026 Amborella trichopoda HOM05D002952 ORTHO05D003361 6.4e-38 161.8 184 45.1
SEGI_03548 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 1.6e-36 157.1 183 46.4
DCAR_014676 Daucus carota HOM05D002952 ORTHO05D003361 7.8e-36 154.8 185 42.7
CiPaw.07G198300 Carya illinoinensis HOM05D002952 ORTHO05D003361 1.7e-35 153.7 189 46.0
Potri.006G073600 Populus trichocarpa HOM05D002952 ORTHO05D003361 6.6e-35 151.8 192 43.2
Nn8g40677 Nelumbo nucifera HOM05D002952 ORTHO05D003361 8.7e-35 151.4 185 44.3
arahy.Tifrunner.gnm1.ann1.32QIWM Arachis hypogaea HOM05D002952 ORTHO05D003361 1.5e-34 150.6 194 43.3
arahy.Tifrunner.gnm1.ann1.MZE1GT Arachis hypogaea HOM05D002952 ORTHO05D003361 1.5e-34 150.6 194 43.3
Sabra18G0115000 Salix brachista HOM05D002952 ORTHO05D003361 1.5e-34 150.6 192 42.2
Aqoxy7G02883 Aquilegia oxysepala HOM05D002952 ORTHO05D003361 3.3e-34 149.4 190 44.7
Rhsim03G0267600 Rhododendron simsii HOM05D002952 ORTHO05D003361 9.6e-34 147.9 189 41.8
Potri.018G140800 Populus trichocarpa HOM05D002952 ORTHO05D003361 1.6e-33 147.1 189 42.9
Cc06_g17430 Coffea canephora HOM05D002952 ORTHO05D003361 2.8e-33 146.4 193 41.5
FAN22G0487 Fragaria x ananassa HOM05D002952 ORTHO05D003361 2.8e-33 146.4 187 41.7
PGR142G2741 Punica granatum HOM05D002952 ORTHO05D003361 2.8e-33 146.4 186 43.0
PSO063G0242 Papaver somniferum HOM05D002952 ORTHO05D003361 3.6e-33 146.0 185 43.8
Haze_22041 Corylus avellana HOM05D002952 ORTHO05D003361 4.8e-33 145.6 185 44.3
Dinv41190 Davidia involucrata HOM05D002952 ORTHO05D003361 4.8e-33 145.6 189 42.3
Lalb_Chr07g0180711 Lupinus albus HOM05D002952 ORTHO05D003361 4.8e-33 145.6 189 40.2
Oeu064560.1 Olea europaea HOM05D002952 ORTHO05D003361 4.8e-33 145.6 187 41.2
FAN12G2043 Fragaria x ananassa HOM05D002952 ORTHO05D003361 8.1e-33 144.8 187 41.2
FvH4_4g07030 Fragaria vesca HOM05D002952 ORTHO05D003361 1.1e-32 144.4 187 41.2
FAN07G2391 Fragaria x ananassa HOM05D002952 ORTHO05D003361 1.1e-32 144.4 187 40.1
PSO170G2574 Papaver somniferum HOM05D002952 ORTHO05D003361 1.1e-32 144.4 185 43.8
Prupe.1G073600 Prunus persica HOM05D002952 ORTHO05D003361 1.1e-32 144.4 185 43.2
Manes.06G018200 Manihot esculenta HOM05D002952 ORTHO05D003361 1.8e-32 143.7 187 43.9
Cfa013462 Carpinus fangiana HOM05D002952 ORTHO05D003361 4.0e-32 142.5 190 43.2
BcaB08g34852 Brassica carinata HOM05D002952 ORTHO05D003361 5.3e-32 142.1 194 41.8
CSS0013758 Camellia sinensis var. sinensis HOM05D002952 ORTHO05D003361 5.3e-32 142.1 187 41.2
FAN17G1204 Fragaria x ananassa HOM05D002952 ORTHO05D003361 6.9e-32 141.7 188 42.0
MD13G1240300 Malus domestica HOM05D002952 ORTHO05D003361 6.9e-32 141.7 185 44.3
unitig_26.g9160 Utricularia gibba HOM05D002952 ORTHO05D003361 6.9e-32 141.7 187 40.6
MSTRG.5937 Avicennia marina HOM05D002952 ORTHO05D003361 1.5e-31 140.6 187 38.5
CDE05G2761 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 1.5e-31 140.6 196 40.8
Duzib150G0495 Durio zibethinus HOM05D002952 ORTHO05D003361 1.5e-31 140.6 188 43.6
Glyma.09G060600 Glycine max HOM05D002952 ORTHO05D003361 1.5e-31 140.6 194 41.2
Sc14g0003040 Simmondsia chinensis HOM05D002952 ORTHO05D003361 1.5e-31 140.6 197 40.1
HPP92_015379 Vanilla planifolia HOM05D002952 ORTHO05D003361 1.5e-31 140.6 190 40.5
Mapoly0006s0005 Marchantia polymorpha HOM05D002952 ORTHO05D003361 2.0e-31 140.2 190 42.6
Actinidia25392 Actinidia chinensis HOM05D002952 ORTHO05D003361 2.6e-31 139.8 189 39.7
Actinidia38497 Actinidia chinensis HOM05D002952 ORTHO05D003361 3.4e-31 139.4 188 39.9
Ciclev10007425m.g Citrus clementina HOM05D002952 ORTHO05D003361 3.4e-31 139.4 188 42.0
COL.COLO4_23445 Corchorus olitorius HOM05D002952 ORTHO05D003361 3.4e-31 139.4 186 44.1
ECA240G1792 Erigeron canadensis HOM05D002952 ORTHO05D003361 3.4e-31 139.4 192 39.6
Thhalv10022546m.g Eutrema salsugineum HOM05D002952 ORTHO05D003361 3.4e-31 139.4 196 41.3
Glyma.15G167100 Glycine max HOM05D002952 ORTHO05D003361 4.5e-31 139.0 194 41.2
RcHm_v2.0_Chr4g0399151 Rosa chinensis HOM05D002952 ORTHO05D003361 4.5e-31 139.0 187 41.2
Ca_21260_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 5.8e-31 138.7 194 39.7
Lsat_1_v5_gn_7_55800 Lactuca sativa HOM05D002952 ORTHO05D003361 5.8e-31 138.7 196 38.8
Dinv25450 Davidia involucrata HOM05D002952 ORTHO05D003361 7.6e-31 138.3 193 42.0
Gohir.D13G212300 Gossypium hirsutum HOM05D002952 ORTHO05D003361 7.6e-31 138.3 189 42.3
Gorai.013G242600 Gossypium raimondii HOM05D002952 ORTHO05D003361 7.6e-31 138.3 186 42.5
Zm00001eb420400 Zea mays HOM05D002952 ORTHO05D003361 9.9e-31 137.9 185 38.4
HanXRQChr03g0065441 Helianthus annuus HOM05D002952 ORTHO05D003361 1.3e-30 137.5 194 41.2
Lju170C21T3 Lonicera japonica HOM05D002952 ORTHO05D003361 1.3e-30 137.5 190 38.4
GSVIVG01029303001 Vitis vinifera HOM05D002952 ORTHO05D003361 1.3e-30 137.5 194 41.2
Migut.J00788 Erythranthe guttata HOM05D002952 ORTHO05D003361 1.7e-30 137.1 187 39.0
Lj6g0025977 Lotus japonicus HOM05D002952 ORTHO05D003361 1.7e-30 137.1 196 41.8
Lalb_Chr13g0299881 Lupinus albus HOM05D002952 ORTHO05D003361 1.7e-30 137.1 192 40.6
VMungo1215G0843 Vigna mungo HOM05D002952 ORTHO05D003361 1.7e-30 137.1 189 41.3
THA.LOC104803958 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 2.2e-30 136.7 192 41.7
THA.LOC104804523 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 2.2e-30 136.7 192 41.7
THA.LOC104804524 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 2.2e-30 136.7 192 41.7
THA.LOC104804525 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 2.2e-30 136.7 192 41.7
Psat4g013440 Pisum sativum HOM05D002952 ORTHO05D003361 2.9e-30 136.3 196 39.3
Thecc.09G188100 Theobroma cacao HOM05D002952 ORTHO05D003361 2.9e-30 136.3 186 41.9
Ca_02121_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 4.9e-30 135.6 194 42.8
THA.LOC104814647 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 4.9e-30 135.6 187 40.1
TPR.G5387 Trifolium pratense HOM05D002952 ORTHO05D003361 4.9e-30 135.6 197 38.6
C07p02900 Brassica napus HOM05D002952 ORTHO05D003361 6.4e-30 135.2 185 43.2
Os04g0298600 Oryza sativa ssp. japonica HOM05D002952 ORTHO05D003361 6.4e-30 135.2 186 40.9
BcaC06g36561 Brassica carinata HOM05D002952 ORTHO05D003361 8.4e-30 134.8 184 43.5
vmacro05990 Vaccinium macrocarpon HOM05D002952 ORTHO05D003361 8.4e-30 134.8 210 37.6
BcaB03g14394 Brassica carinata HOM05D002952 ORTHO05D003361 1.1e-29 134.4 196 40.8
A07p01440 Brassica napus HOM05D002952 ORTHO05D003361 1.1e-29 134.4 185 43.2
Sabra06G0054900 Salix brachista HOM05D002952 ORTHO05D003361 1.1e-29 134.4 192 41.7
Peaxi162Scf00231g00918 Petunia axillaris HOM05D002952 ORTHO05D003361 1.4e-29 134.0 187 38.0
VMungo1309G2675 Vigna mungo HOM05D002952 ORTHO05D003361 1.4e-29 134.0 194 40.2
CANSAT01G1287 Cannabis sativa HOM05D002952 ORTHO05D003361 1.9e-29 133.7 183 40.4
Psat1g143480 Pisum sativum HOM05D002952 ORTHO05D003361 1.9e-29 133.7 189 41.8
A07p16350 Brassica napus HOM05D002952 ORTHO05D003361 2.4e-29 133.3 187 40.6
Cpa.g.sc115.66 Carica papaya HOM05D002952 ORTHO05D003361 2.4e-29 133.3 189 39.2
Sp3g32670 Schrenkiella parvula HOM05D002952 ORTHO05D003361 2.4e-29 133.3 194 40.2
Atru.chr7.937 Acer truncatum HOM05D002952 ORTHO05D003361 3.2e-29 132.9 189 39.7
Gohir.A13G207800 Gossypium hirsutum HOM05D002952 ORTHO05D003361 3.2e-29 132.9 188 41.5
Phvul.003G140400 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 3.2e-29 132.9 194 42.3
TPR.G31045 Trifolium pratense HOM05D002952 ORTHO05D003361 3.2e-29 132.9 189 40.7
BcaB03g16719 Brassica carinata HOM05D002952 ORTHO05D003361 4.2e-29 132.5 185 43.2
Aa31LG8G16340 Aethionema arabicum HOM05D002952 ORTHO05D003361 5.4e-29 132.1 198 39.4
Eucgr.C00100 Eucalyptus grandis HOM05D002952 ORTHO05D003361 5.4e-29 132.1 188 41.0
Sed0020294 Sechium edule HOM05D002952 ORTHO05D003361 9.3e-29 131.3 187 39.6
CAN.G32.3 Capsicum annuum HOM05D002952 ORTHO05D003361 1.2e-28 131.0 188 38.3
Medtr2g038210 Medicago truncatula HOM05D002952 ORTHO05D003361 1.2e-28 131.0 194 41.2
Medtr4g127210 Medicago truncatula HOM05D002952 ORTHO05D003361 1.6e-28 130.6 194 37.1
Sopen07g007020 Solanum pennellii HOM05D002952 ORTHO05D003361 2.7e-28 129.8 193 39.4
MBI14_g10721_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 3.5e-28 129.4 175 41.7
EL10Ac8g19298 Beta vulgaris HOM05D002952 ORTHO05D003361 4.6e-28 129.0 191 38.7
AT3G28430 Arabidopsis thaliana HOM05D002952 ORTHO05D003361 3.9e-27 125.9 196 38.8
Lj4g0023754 Lotus japonicus HOM05D002952 ORTHO05D003361 5.1e-27 125.6 189 37.0
C07p24030 Brassica napus HOM05D002952 ORTHO05D003361 6.7e-27 125.2 209 37.8
BolC7t42928H Brassica oleracea HOM05D002952 ORTHO05D003361 6.7e-27 125.2 209 38.3
AagrBONN_evm.TU.Sc2ySwM_362.2680 Anthoceros agrestis HOM05D002952 ORTHO05D003361 8.7e-27 124.8 190 37.9
AL5G18050 Arabidopsis lyrata HOM05D002952 ORTHO05D003361 1.1e-26 124.4 195 39.0
ClCG11G011660 Citrullus lanatus HOM05D002952 ORTHO05D003361 1.5e-26 124.0 187 38.0
MELO3C003959.2 Cucumis melo HOM05D002952 ORTHO05D003361 1.5e-26 124.0 187 38.0
Ah.09g229430 Amaranthus hybridus HOM05D002952 ORTHO05D003361 2.5e-26 123.2 188 38.8
BraA07t29362Z Brassica rapa HOM05D002952 ORTHO05D003361 2.5e-26 123.2 202 37.6
AUR62027417 Chenopodium quinoa HOM05D002952 ORTHO05D003361 4.3e-26 122.5 187 37.4
AUR62031276 Chenopodium quinoa HOM05D002952 ORTHO05D003361 4.3e-26 122.5 183 38.3
CsaV3_2G008810 Cucumis sativus L. HOM05D002952 ORTHO05D003361 5.6e-26 122.1 187 38.0
HanXRQChr09g0245381 Helianthus annuus HOM05D002952 ORTHO05D003361 5.6e-26 122.1 192 36.5
Solyc07g018090.4 Solanum lycopersicum HOM05D002952 ORTHO05D003361 7.4e-26 121.7 162 41.4
Hma1.2p1_0235F.1_g098720 Hydrangea macrophylla HOM05D002952 ORTHO05D003361 1.1e-24 117.9 121 50.4
Nitab4.5_0001245g0040 Nicotiana tabacum HOM05D002952 ORTHO05D003361 9.0e-24 114.8 202 36.1
Sc02g0000570 Simmondsia chinensis HOM05D002952 ORTHO05D003361 1.2e-23 114.4 195 40.5
Pp3c5_16960 Physcomitrium patens HOM05D002952 ORTHO05D003361 1.5e-23 114.0 187 37.4
Glyma.02G198100 Glycine max HOM05D002952 ORTHO05D003361 2.0e-23 113.6 224 34.4
TAR633G2330 Trochodendron aralioides HOM05D002952 ORTHO05D003361 2.0e-23 113.6 208 36.5
CARHR292530 Cardamine hirsuta HOM05D002952 ORTHO05D003361 2.6e-23 113.2 196 36.2
CDE05G1903 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 5.8e-23 112.1 151 42.4
COL.COLO4_29595 Corchorus olitorius HOM05D002952 ORTHO05D003361 1.7e-22 110.5 190 37.9
PSO384G1939 Papaver somniferum HOM05D002952 ORTHO05D003361 4.9e-22 109.0 184 38.0
RcHm_v2.0_Chr3g0475531 Rosa chinensis HOM05D002952 ORTHO05D003361 1.1e-21 107.8 184 36.4
Lj5g0011168 Lotus japonicus HOM05D002952 ORTHO05D003361 1.4e-21 107.5 185 36.2
Gorai.006G150500 Gossypium raimondii HOM05D002952 ORTHO05D003361 2.5e-21 106.7 216 37.0
Phvul.007G269200 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 2.5e-21 106.7 219 34.2
Nn6g34739 Nelumbo nucifera HOM05D002952 ORTHO05D003361 5.5e-21 105.5 184 37.5
Sabra06G0157600 Salix brachista HOM05D002952 ORTHO05D003361 7.1e-21 105.1 206 35.4
CBR_g9125 Chara braunii HOM05D002952 ORTHO05D003361 9.3e-21 104.8 188 33.5
CANSAT64G1472 Cannabis sativa HOM05D002952 ORTHO05D003361 1.2e-20 104.4 213 33.3
Gohir.D09G131900 Gossypium hirsutum HOM05D002952 ORTHO05D003361 1.2e-20 104.4 200 37.0
Pp3c16_8730 Physcomitrium patens HOM05D002952 ORTHO05D003361 3.5e-20 102.8 185 35.1
Haze_19692 Corylus avellana HOM05D002952 ORTHO05D003361 4.6e-20 102.4 186 34.9
Gohir.A09G135300 Gossypium hirsutum HOM05D002952 ORTHO05D003361 6.0e-20 102.1 190 36.8
Nitab4.5_0006774g0010 Nicotiana tabacum HOM05D002952 ORTHO05D003361 6.0e-20 102.1 170 36.5
SMO356G0480 Selaginella moellendorffii HOM05D002952 ORTHO05D003361 7.9e-20 101.7 177 35.0
Cfa016675 Carpinus fangiana HOM05D002952 ORTHO05D003361 1.0e-19 101.3 190 35.8
CiPaw.10G016000 Carya illinoinensis HOM05D002952 ORTHO05D003361 1.0e-19 101.3 219 32.4
Rhsim04G0130200 Rhododendron simsii HOM05D002952 ORTHO05D003361 1.0e-19 101.3 192 35.4
BraA07t27938Z Brassica rapa HOM05D002952 ORTHO05D003361 1.3e-19 100.9 191 37.2
Potri.006G204600 Populus trichocarpa HOM05D002952 ORTHO05D003361 1.3e-19 100.9 191 37.2
Duzib093G0565 Durio zibethinus HOM05D002952 ORTHO05D003361 1.8e-19 100.5 190 36.3
Psat6g084840 Pisum sativum HOM05D002952 ORTHO05D003361 1.8e-19 100.5 183 35.5
QL07p037253 Quercus lobata HOM05D002952 ORTHO05D003361 2.3e-19 100.1 190 34.7
Atru.chr8.1386 Acer truncatum HOM05D002952 ORTHO05D003361 3.9e-19 99.4 194 36.6
Thecc.05G101800 Theobroma cacao HOM05D002952 ORTHO05D003361 3.9e-19 99.4 190 36.8
Cc06_g06410 Coffea canephora HOM05D002952 ORTHO05D003361 6.7e-19 98.6 186 37.1
SGA_v2.0_scaffold112G31613 Striga asiatica HOM05D002952 ORTHO05D003361 6.7e-19 98.6 113 46.0
TPR.G31863 Trifolium pratense HOM05D002952 ORTHO05D003361 6.7e-19 98.6 184 35.3
FvH4_6g20080 Fragaria vesca HOM05D002952 ORTHO05D003361 1.1e-18 97.8 184 34.2
vmacro08846 Vaccinium macrocarpon HOM05D002952 ORTHO05D003361 1.1e-18 97.8 191 36.1
GSVIVG01033943001 Vitis vinifera HOM05D002952 ORTHO05D003361 3.3e-18 96.3 190 36.8
Ciclev10011126m.g Citrus clementina HOM05D002952 ORTHO05D003361 4.3e-18 95.9 197 34.0
FAN09G1177 Fragaria x ananassa HOM05D002952 ORTHO05D003361 5.6e-18 95.5 184 33.7
CSS0009413 Camellia sinensis var. sinensis HOM05D002952 ORTHO05D003361 7.4e-18 95.1 192 36.5
FAN05G1787 Fragaria x ananassa HOM05D002952 ORTHO05D003361 7.4e-18 95.1 184 33.7
FAN14G0567 Fragaria x ananassa HOM05D002952 ORTHO05D003361 9.6e-18 94.7 182 34.1
Prupe.7G097500 Prunus persica HOM05D002952 ORTHO05D003361 1.3e-17 94.4 185 31.4
Ca_11716_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 2.1e-17 93.6 187 32.6
arahy.Tifrunner.gnm1.ann1.0X8X9Q Arachis hypogaea HOM05D002952 ORTHO05D003361 2.4e-16 90.1 184 35.3
arahy.Tifrunner.gnm1.ann1.4V0AV8 Arachis hypogaea HOM05D002952 ORTHO05D003361 2.4e-16 90.1 184 35.3
ATR0772G085 Amborella trichopoda HOM05D002952 ORTHO05D003361 3.1e-16 89.7 186 32.8
Eucgr.A02600 Eucalyptus grandis HOM05D002952 ORTHO05D003361 3.1e-16 89.7 185 35.1
Lj1C1049T3 Lonicera japonica HOM05D002952 ORTHO05D003361 4.0e-16 89.4 189 34.9
MD12G1037800 Malus domestica HOM05D002952 ORTHO05D003361 9.0e-16 88.2 184 29.9
MD14G1036800 Malus domestica HOM05D002952 ORTHO05D003361 2.6e-15 86.7 184 30.4
Manes.08G032200 Manihot esculenta HOM05D002952 ORTHO05D003361 4.5e-15 85.9 185 31.9
Carub.0005s0694 Capsella rubella HOM05D002952 ORTHO05D003361 1.7e-14 84.0 115 40.9
FAN02G4506 Fragaria x ananassa HOM05D002952 ORTHO05D003361 4.9e-14 82.4 184 31.5
Glyma.10G078851 Glycine max HOM05D002952 ORTHO05D003361 1.1e-13 81.3 161 34.8
Medtr1g057130 Medicago truncatula HOM05D002952 ORTHO05D003361 1.4e-13 80.9 186 32.8
HanXRQChr03g0065431 Helianthus annuus HOM05D002952 ORTHO05D003361 6.7e-11 72.0 137 33.6
MBI16_g46830_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 5.7e-10 68.9 53 54.7
Hund12689 Selenicereus undatus HOM05D002952 ORTHO05D003361 8.2e-09 65.1 193 28.0
EL10Ac7g16807 Beta vulgaris HOM05D002952 ORTHO05D003361 4.1e-08 62.8 110 38.2
QL02p047151 Quercus lobata HOM05D002952 ORTHO05D003361 1.5e-07 60.8 53 52.8
Cpa.g.sc104.51 Carica papaya HOM05D002952 ORTHO05D003361 1.0e-06 58.2 61 47.5


User provided reference genes

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