Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10733 Sequoiadendron giganteum HOM05D052248 ORTHO05D007859 1.3e-62 243.0 132 100.0
vmacro12776 Vaccinium macrocarpon HOM05D000189 ORTHO05D007859 2.3e-16 89.4 73 57.5
PGR119G1265 Punica granatum HOM05D000189 ORTHO05D007859 5.2e-16 88.2 73 53.4
Rhsim10G0130500 Rhododendron simsii HOM05D000189 ORTHO05D007859 1.1e-15 87.0 84 50.0
Eucgr.I00040 Eucalyptus grandis HOM05D000189 ORTHO05D007859 1.5e-15 86.7 73 52.1
Actinidia06600 Actinidia chinensis HOM05D000189 ORTHO05D007859 2.6e-15 85.9 68 55.9
Pp3c14_25730 Physcomitrium patens HOM05D000189 ORTHO05D007859 2.6e-15 85.9 73 49.3
Dinv06652 Davidia involucrata HOM05D000189 ORTHO05D007859 3.3e-15 85.5 73 49.3
ATR0709G034 Amborella trichopoda HOM05D000189 ORTHO05D007859 7.4e-15 84.3 73 52.1
TAR628G1698 Trochodendron aralioides HOM05D000189 ORTHO05D007859 9.7e-15 84.0 73 49.3
Aqoxy5G02356 Aquilegia oxysepala HOM05D000189 ORTHO05D007859 1.3e-14 83.6 73 46.6
FAN26G1447 Fragaria x ananassa HOM05D000189 ORTHO05D007859 1.3e-14 83.6 73 46.6
Gohir.A05G339800 Gossypium hirsutum HOM05D002558 ORTHO05D002768 1.3e-14 83.6 101 40.6
Gohir.A11G224808 Gossypium hirsutum HOM05D000189 ORTHO05D007859 1.3e-14 83.6 73 47.9
DCAR_019974 Daucus carota HOM05D000189 ORTHO05D007859 2.2e-14 82.8 73 47.9
Gohir.D11G229200 Gossypium hirsutum HOM05D000189 ORTHO05D007859 2.2e-14 82.8 73 47.9
Gorai.003G068400 Gossypium raimondii HOM05D000189 ORTHO05D007859 2.2e-14 82.8 73 47.9
Lsat_1_v5_gn_1_80940 Lactuca sativa HOM05D000189 ORTHO05D007859 2.8e-14 82.4 70 55.7
Sc09g0002050 Simmondsia chinensis HOM05D000189 ORTHO05D007859 3.7e-14 82.0 73 47.9
Thecc.01G143200 Theobroma cacao HOM05D000189 ORTHO05D007859 3.7e-14 82.0 76 48.7
FvH4_1g25640 Fragaria vesca HOM05D000189 ORTHO05D007859 4.8e-14 81.6 73 46.6
FAN19G0214 Fragaria x ananassa HOM05D000189 ORTHO05D007859 4.8e-14 81.6 73 46.6
EL10Ac4g09653 Beta vulgaris HOM05D000189 ORTHO05D007859 6.3e-14 81.3 73 46.6
Lj2A612T28 Lonicera japonica HOM05D000189 ORTHO05D007859 6.3e-14 81.3 77 46.8
TWI79G0061 Tripterygium wilfordii HOM05D000189 ORTHO05D007859 6.3e-14 81.3 77 44.2
AT5G08710 Arabidopsis thaliana HOM05D000189 ORTHO05D007859 8.2e-14 80.9 73 42.5
CBR_g98 Chara braunii HOM05D004510 ORTHO05D005302 8.2e-14 80.9 61 54.1
AUR62006916 Chenopodium quinoa HOM05D000189 ORTHO05D007859 8.2e-14 80.9 73 47.9
GSVIVG01022385001 Vitis vinifera HOM05D000189 ORTHO05D007859 8.2e-14 80.9 73 46.6
CSS0023610 Camellia sinensis var. sinensis HOM05D000189 ORTHO05D007859 1.1e-13 80.5 95 45.3
Gohir.A05G363200 Gossypium hirsutum HOM05D000189 ORTHO05D007859 1.1e-13 80.5 73 46.6
CARHR204300 Cardamine hirsuta HOM05D000189 ORTHO05D007859 1.8e-13 79.7 73 41.1
Sabra05G0058100 Salix brachista HOM05D000189 ORTHO05D007859 1.8e-13 79.7 73 47.9
Sp6g34160 Schrenkiella parvula HOM05D000189 ORTHO05D007859 1.8e-13 79.7 73 41.1
BcaB05g21570 Brassica carinata HOM05D000189 ORTHO05D007859 2.4e-13 79.3 73 42.5
QL10p039723 Quercus lobata HOM05D000189 ORTHO05D007859 2.4e-13 79.3 73 45.2
RcHm_v2.0_Chr2g0123961 Rosa chinensis HOM05D000189 ORTHO05D007859 2.4e-13 79.3 87 43.7
AL6G19440 Arabidopsis lyrata HOM05D000189 ORTHO05D007859 3.1e-13 79.0 73 42.5
Thhalv10013591m.g Eutrema salsugineum HOM05D000189 ORTHO05D007859 3.1e-13 79.0 73 42.5
Potri.005G071000 Populus trichocarpa HOM05D000189 ORTHO05D007859 3.1e-13 79.0 73 47.9
AUR62000563 Chenopodium quinoa HOM05D000189 ORTHO05D007859 4.1e-13 78.6 72 47.2
Phvul.009G151700 Phaseolus vulgaris HOM05D000189 ORTHO05D007859 5.3e-13 78.2 73 49.3
Carub.0006s0768 Capsella rubella HOM05D000189 ORTHO05D007859 7.0e-13 77.8 73 41.1
CiPaw.04G179600 Carya illinoinensis HOM05D000189 ORTHO05D007859 7.0e-13 77.8 73 43.8
Duzib248G0653 Durio zibethinus HOM05D000189 ORTHO05D007859 7.0e-13 77.8 76 46.1
HanXRQChr01g0019121 Helianthus annuus HOM05D000189 ORTHO05D007859 7.0e-13 77.8 70 51.4
SMO144G0111 Selaginella moellendorffii HOM05D000189 ORTHO05D007859 7.0e-13 77.8 65 50.8
C02p03720 Brassica napus HOM05D000189 ORTHO05D007859 9.1e-13 77.4 73 39.7
BolC2t06332H Brassica oleracea HOM05D000189 ORTHO05D007859 9.1e-13 77.4 73 39.7
MBI03_g11131_MAGBIO Magnolia biondii HOM05D000189 ORTHO05D007859 9.1e-13 77.4 73 45.2
BraA02t04966Z Brassica rapa HOM05D000189 ORTHO05D007859 1.2e-12 77.0 73 39.7
Nn5g28246 Nelumbo nucifera HOM05D000189 ORTHO05D007859 1.2e-12 77.0 73 45.2
arahy.Tifrunner.gnm1.ann1.682KPN Arachis hypogaea HOM05D000189 ORTHO05D007859 1.6e-12 76.6 77 44.2
BcaC03g13240 Brassica carinata HOM05D000189 ORTHO05D007859 1.6e-12 76.6 73 39.7
SalBow7G4190 Salvia bowleyana HOM05D000189 ORTHO05D007859 1.6e-12 76.6 70 47.1
Os11g0545800 Oryza sativa ssp. japonica HOM05D000189 ORTHO05D007859 2.0e-12 76.3 73 49.3
Psat5g058320 Pisum sativum HOM05D000189 ORTHO05D007859 2.0e-12 76.3 77 42.9
arahy.Tifrunner.gnm1.ann1.50NT7J Arachis hypogaea HOM05D000189 ORTHO05D007859 2.6e-12 75.9 77 44.2
Oeu042315.1 Olea europaea HOM05D000189 ORTHO05D007859 2.6e-12 75.9 73 43.8
Ca_17028_v3 Cicer arietinum L. HOM05D000189 ORTHO05D007859 3.5e-12 75.5 73 46.6
ECA248G3490 Erigeron canadensis HOM05D000552 ORTHO05D007859 3.5e-12 75.5 70 50.0
Ah.02g117830 Amaranthus hybridus HOM05D000189 ORTHO05D007859 4.5e-12 75.1 73 45.2
Migut.L00584 Erythranthe guttata HOM05D000189 ORTHO05D007859 4.5e-12 75.1 70 47.1
Hma1.2p1_0073F.1_g038450 Hydrangea macrophylla HOM05D000189 ORTHO05D007859 4.5e-12 75.1 77 44.2
Aa31LG3G17850 Aethionema arabicum HOM05D000189 ORTHO05D007859 5.9e-12 74.7 75 40.0
TPR.G7871 Trifolium pratense HOM05D000189 ORTHO05D007859 5.9e-12 74.7 77 42.9
Glyma.04G206900 Glycine max HOM05D000189 ORTHO05D007859 7.7e-12 74.3 77 42.9
Lj1g0005687 Lotus japonicus HOM05D000189 ORTHO05D007859 7.7e-12 74.3 77 41.6
MD00G1127500 Malus domestica HOM05D000189 ORTHO05D007859 7.7e-12 74.3 73 46.6
Lalb_Chr08g0237931 Lupinus albus HOM05D000189 ORTHO05D007859 1.0e-11 73.9 73 46.6
Medtr3g097060 Medicago truncatula HOM05D000189 ORTHO05D007859 1.0e-11 73.9 77 42.9
Sed0009877 Sechium edule HOM05D000189 ORTHO05D007859 1.7e-11 73.2 73 43.8
VMungo1309G2090 Vigna mungo HOM05D000189 ORTHO05D007859 2.9e-11 72.4 73 45.2
PSO210G6791 Papaver somniferum HOM05D000189 ORTHO05D007859 3.8e-11 72.0 73 42.5
Migut.L00266 Erythranthe guttata HOM05D000189 ORTHO05D007859 5.0e-11 71.6 69 44.9
THA.LOC104800276 Tarenaya hassleriana HOM05D000189 ORTHO05D007859 6.5e-11 71.2 75 40.0
Cc00_g14750 Coffea canephora HOM05D000189 ORTHO05D007859 8.5e-11 70.9 70 45.7
Manes.17G018825 Manihot esculenta HOM05D000189 ORTHO05D007859 1.1e-10 70.5 73 39.7
MELO3C009002.2 Cucumis melo HOM05D000189 ORTHO05D007859 1.5e-10 70.1 73 39.7
CsaV3_4G031210 Cucumis sativus L. HOM05D000189 ORTHO05D007859 1.9e-10 69.7 73 39.7
Solyc05g056590.4 Solanum lycopersicum HOM05D000189 ORTHO05D007859 1.9e-10 69.7 75 44.0
Sopen05g034990 Solanum pennellii HOM05D000189 ORTHO05D007859 1.9e-10 69.7 75 44.0
COL.COLO4_12122 Corchorus olitorius HOM05D000189 ORTHO05D007859 3.2e-10 68.9 76 43.4
Peaxi162Scf00925g00013 Petunia axillaris HOM05D000189 ORTHO05D007859 3.2e-10 68.9 81 40.7
SEGI_41123 Sequoiadendron giganteum HOM05D052248 ORTHO05D007859 4.2e-10 68.6 55 92.7
CAN.G1464.5 Capsicum annuum HOM05D000189 ORTHO05D007859 7.2e-10 67.8 67 47.8
Ciclev10003878m.g Citrus clementina HOM05D000189 ORTHO05D007859 9.4e-10 67.4 73 42.5
FAN28G0421 Fragaria x ananassa HOM05D000189 ORTHO05D007859 2.1e-09 66.2 105 33.3
Zm00001eb197640 Zea mays HOM05D000189 ORTHO05D007859 2.7e-09 65.9 73 43.8
ClCG04G001170 Citrullus lanatus HOM05D000189 ORTHO05D007859 3.6e-09 65.5 83 37.3
Mapoly0001s0080 Marchantia polymorpha HOM05D000189 ORTHO05D007859 1.0e-08 63.9 76 39.5
Prupe.4G282400 Prunus persica HOM05D000189 ORTHO05D007859 1.4e-08 63.5 73 43.8
AagrBONN_evm.TU.Sc2ySwM_344.533 Anthoceros agrestis HOM05D000189 ORTHO05D007859 3.0e-08 62.4 73 39.7
unitig_60.g25691 Utricularia gibba HOM05D000189 ORTHO05D007859 3.0e-08 62.4 96 33.3
ATR0584G009 Amborella trichopoda HOM05D000189 ORTHO05D004078 1.7e-06 56.6 59 42.4
Pp3c5_28880 Physcomitrium patens HOM05D000189 ORTHO05D012441 2.8e-06 55.8 60 45.0
Nn5g28428 Nelumbo nucifera HOM05D000189 ORTHO05D004078 4.8e-06 55.1 59 40.7
Nn1g08980 Nelumbo nucifera HOM05D000189 ORTHO05D004078 8.2e-06 54.3 60 38.3
Potri.015G107000 Populus trichocarpa HOM05D000189 ORTHO05D008437 8.2e-06 54.3 57 42.1


User provided reference genes

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