Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 3.2e-53 211.5 105 100.0
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 6.1e-36 154.1 105 68.6
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 3.9e-35 151.4 105 66.7
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 2.8e-33 145.2 105 63.8
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 6.3e-33 144.1 105 64.8
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 6.3e-33 144.1 104 65.4
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.4e-32 142.1 105 62.9
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 9.1e-32 140.2 104 62.5
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 9.1e-32 140.2 105 61.9
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 1.2e-31 139.8 105 61.9
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 1.2e-31 139.8 104 61.5
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 1.2e-31 139.8 104 62.5
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 1.2e-31 139.8 105 61.0
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.2e-31 139.8 105 61.0
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 1.2e-31 139.8 105 61.9
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.6e-31 139.4 104 61.5
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 2.0e-31 139.0 105 61.0
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 2.0e-31 139.0 105 61.9
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 2.0e-31 139.0 105 60.0
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 2.6e-31 138.7 105 61.9
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 4.5e-31 137.9 104 61.5
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 4.5e-31 137.9 105 61.0
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 4.5e-31 137.9 105 60.0
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 7.7e-31 137.1 105 61.9
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 7.7e-31 137.1 105 61.0
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 1.0e-30 136.7 105 61.0
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 1.0e-30 136.7 105 61.9
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 1.3e-30 136.3 105 60.0
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 1.7e-30 136.0 104 60.6
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 1.7e-30 136.0 104 59.6
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 1.7e-30 136.0 104 61.5
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 2.9e-30 135.2 104 62.5
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 2.9e-30 135.2 105 61.0
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 3.8e-30 134.8 105 57.1
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 5.0e-30 134.4 105 60.0
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 5.0e-30 134.4 105 60.0
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 6.5e-30 134.0 105 59.0
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 6.5e-30 134.0 104 58.7
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 6.5e-30 134.0 105 60.0
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 8.5e-30 133.7 104 59.6
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 8.5e-30 133.7 105 62.9
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.1e-29 133.3 105 61.0
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 1.1e-29 133.3 105 59.0
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 1.1e-29 133.3 105 61.0
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 1.5e-29 132.9 105 59.0
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 2.5e-29 132.1 104 57.7
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 5.5e-29 131.0 104 57.7
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 9.4e-29 130.2 105 58.1
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 9.4e-29 130.2 105 56.2
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 1.2e-28 129.8 97 64.9
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 1.2e-28 129.8 105 60.0
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 1.2e-28 129.8 105 60.0
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 1.2e-28 129.8 105 56.2
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 1.6e-28 129.4 105 58.1
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 2.1e-28 129.0 105 59.0
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 2.7e-28 128.6 105 55.2
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 2.7e-28 128.6 105 59.0
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 4.7e-28 127.9 105 56.2
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 4.7e-28 127.9 104 53.8
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 4.7e-28 127.9 105 59.0
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 4.7e-28 127.9 104 57.7
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 8.0e-28 127.1 104 55.8
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 2.3e-27 125.6 104 57.7
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 2.3e-27 125.6 104 57.7
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 2.3e-27 125.6 105 56.2
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 3.0e-27 125.2 105 54.3
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 3.0e-27 125.2 104 56.7
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 5.2e-27 124.4 106 60.4
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 6.7e-27 124.0 96 63.5
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 6.7e-27 124.0 105 55.2
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 6.7e-27 124.0 96 59.4
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 6.7e-27 124.0 105 56.2
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 8.8e-27 123.6 105 54.3
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 1.1e-26 123.2 104 51.9
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 5.7e-26 120.9 90 63.3
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.3e-25 119.8 93 61.3
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 3.7e-25 118.2 105 53.3
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 8.2e-25 117.1 104 53.8
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 4.1e-24 114.8 104 50.0
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 9.1e-24 113.6 104 52.9
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.7e-22 109.4 105 52.4
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 4.2e-21 104.8 100 49.0
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 7.2e-21 104.0 77 64.9
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 6.1e-20 100.9 64 76.6
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 1.4e-19 99.8 106 46.2
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 3.0e-19 98.6 64 73.4
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 5.7e-18 94.4 63 73.0
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 1.3e-17 93.2 78 59.0
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 2.8e-17 92.0 96 45.8
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 3.7e-17 91.7 69 66.7
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.4e-16 89.7 102 49.0
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.6e-15 86.3 63 65.1
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.9e-13 79.3 82 54.9
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 2.5e-13 79.0 74 56.8
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 8.0e-12 73.9 97 38.1
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 9.2e-08 60.5 85 45.9
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 4.5e-07 58.2 52 57.7
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 6.6e-06 54.3 95 34.7


User provided reference genes

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