Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 1.1e-181 639.8 325 100.0
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.7e-92 343.6 288 60.8
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 1.1e-91 340.9 274 62.8
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 1.4e-91 340.5 288 60.4
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 2.4e-91 339.7 325 55.1
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 5.4e-91 338.6 289 60.9
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 7.0e-91 338.2 292 58.6
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.6e-90 337.0 282 59.2
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 1.6e-90 337.0 277 61.0
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 2.0e-90 336.7 257 63.0
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 3.5e-90 335.9 295 59.7
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 3.5e-90 335.9 295 59.7
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 4.6e-90 335.5 302 57.6
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 4.6e-90 335.5 289 60.6
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 6.0e-90 335.1 284 58.8
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 6.0e-90 335.1 280 58.2
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 7.8e-90 334.7 295 59.3
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 7.8e-90 334.7 295 59.3
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 7.8e-90 334.7 269 61.7
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 1.3e-89 334.0 284 58.5
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 1.7e-89 333.6 294 59.2
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 2.3e-89 333.2 289 57.4
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 2.3e-89 333.2 301 57.5
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.3e-89 333.2 277 59.2
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.3e-89 333.2 282 58.5
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.3e-89 333.2 270 61.9
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 3.9e-89 332.4 279 58.4
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 3.9e-89 332.4 268 62.3
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 8.6e-89 331.3 265 61.1
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 8.6e-89 331.3 268 62.7
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 8.6e-89 331.3 270 61.9
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 1.1e-88 330.9 247 63.6
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 1.1e-88 330.9 301 56.5
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 1.5e-88 330.5 292 56.2
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 1.5e-88 330.5 275 60.0
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 2.5e-88 329.7 284 59.2
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 2.5e-88 329.7 268 60.4
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 3.3e-88 329.3 268 62.7
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 3.3e-88 329.3 279 57.7
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 3.3e-88 329.3 271 60.9
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 4.3e-88 328.9 277 59.2
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.6e-88 328.6 279 57.3
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 9.5e-88 327.8 288 58.3
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 9.5e-88 327.8 268 61.2
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 9.5e-88 327.8 318 54.1
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.5e-88 327.8 270 61.5
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 1.2e-87 327.4 288 58.0
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 1.2e-87 327.4 297 56.6
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 1.2e-87 327.4 285 57.9
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 1.2e-87 327.4 319 55.5
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.6e-87 327.0 293 57.3
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 1.6e-87 327.0 294 57.1
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 2.1e-87 326.6 263 61.6
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 2.1e-87 326.6 263 61.6
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 2.1e-87 326.6 284 59.2
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 2.8e-87 326.2 314 54.1
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 2.8e-87 326.2 305 55.1
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 4.7e-87 325.5 269 59.5
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 8.1e-87 324.7 331 52.9
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 8.1e-87 324.7 254 62.2
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 1.4e-86 323.9 270 59.6
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 1.8e-86 323.6 290 56.9
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.8e-86 323.6 261 61.7
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 1.8e-86 323.6 297 55.9
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 2.3e-86 323.2 251 62.5
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 2.3e-86 323.2 271 58.7
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 2.3e-86 323.2 251 62.9
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 3.1e-86 322.8 282 58.5
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 3.1e-86 322.8 304 55.3
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 4.0e-86 322.4 300 55.7
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 1.2e-85 320.9 319 53.9
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 1.5e-85 320.5 313 55.3
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 2.0e-85 320.1 306 54.9
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 2.0e-85 320.1 341 51.9
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 2.0e-85 320.1 288 56.9
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 2.6e-85 319.7 270 58.9
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 2.6e-85 319.7 286 57.0
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 2.6e-85 319.7 250 62.8
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 4.4e-85 318.9 266 59.8
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 4.4e-85 318.9 285 57.5
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 4.4e-85 318.9 275 58.2
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 4.4e-85 318.9 294 56.5
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 5.8e-85 318.5 265 58.9
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 7.5e-85 318.2 278 56.8
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 1.7e-84 317.0 288 56.2
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.2e-84 316.6 247 62.3
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 4.9e-84 315.5 288 56.9
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 6.4e-84 315.1 247 61.9
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 8.3e-84 314.7 247 62.3
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 1.1e-83 314.3 248 60.9
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.4e-83 313.2 334 50.0
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 3.2e-83 312.8 290 56.9
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 1.6e-82 310.5 281 57.3
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 2.7e-82 309.7 298 52.7
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 4.6e-82 308.9 247 60.3
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 7.8e-82 308.1 250 58.0
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 1.1e-80 304.3 252 57.9
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 4.3e-80 302.4 283 54.1
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 2.8e-79 299.7 279 54.5
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 2.3e-78 296.6 394 44.2
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 2.0e-77 293.5 301 51.2
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.2e-76 290.0 288 51.7
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.9e-75 287.0 245 56.7
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 6.0e-74 282.0 218 63.3
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 1.0e-73 281.2 240 58.8
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 3.0e-73 279.6 226 59.7
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 8.9e-70 268.1 286 50.0
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.0e-65 254.6 294 48.0
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 3.0e-65 253.1 293 47.4
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 5.3e-62 242.3 278 47.1
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 8.4e-60 235.0 283 44.5
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 3.5e-58 229.6 296 44.6
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 4.6e-58 229.2 248 48.4
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 6.0e-58 228.8 232 53.0
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 1.4e-54 217.6 266 44.7
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 1.2e-53 214.5 322 41.0
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 4.6e-50 202.6 324 40.1
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 5.1e-49 199.1 247 43.7
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 7.4e-48 195.3 151 64.9
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 6.9e-46 188.7 184 54.3
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.1e-43 181.4 172 57.6
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 3.5e-42 176.4 219 46.1
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 3.0e-41 173.3 130 63.1
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 6.7e-41 172.2 224 41.1
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 2.1e-39 167.2 239 41.0
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 4.8e-39 166.0 109 70.6
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 6.9e-38 162.2 146 54.8
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.3e-33 147.9 121 60.3
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.3e-33 147.9 121 60.3
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 6.7e-33 145.6 177 46.3
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 1.8e-30 137.5 123 54.5
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 5.9e-29 132.5 217 36.4
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.0e-20 105.1 88 60.2
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 1.7e-20 104.4 100 51.0
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 5.0e-20 102.8 111 48.6
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 1.9e-19 100.9 66 69.7
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 2.5e-19 100.5 95 54.7
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 9.4e-19 98.6 136 43.4
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 2.1e-18 97.4 65 67.7
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 2.7e-18 97.1 59 74.6
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 2.4e-14 84.0 73 56.2
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 4.1e-14 83.2 121 43.0
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 7.0e-14 82.4 121 42.1
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 2.6e-13 80.5 73 54.8
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 4.5e-13 79.7 50 70.0
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 2.9e-12 77.0 46 73.9
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 7.2e-11 72.4 154 33.1
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 1.2e-10 71.6 52 63.5
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 4.7e-10 69.7 46 69.6
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 2.3e-09 67.4 43 74.4
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 3.0e-09 67.0 54 61.1
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.7e-07 61.2 69 46.4


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