Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10566 Sequoiadendron giganteum HOM05D005273 ORTHO05D006195 1.5e-172 609.4 301 100.0
Gohir.A11G060000 Gossypium hirsutum HOM05D005273 ORTHO05D006195 4.7e-65 252.3 151 79.5
Gorai.007G069300 Gossypium raimondii HOM05D005273 ORTHO05D006195 4.7e-65 252.3 151 79.5
Sabra07G0117800 Salix brachista HOM05D005273 ORTHO05D006195 4.7e-65 252.3 155 77.4
TAR627G0042 Trochodendron aralioides HOM05D005273 ORTHO05D006195 4.7e-65 252.3 156 76.3
Atru.chr6.2972 Acer truncatum HOM05D005273 ORTHO05D006195 6.1e-65 251.9 156 76.3
Sabra07G0113000 Salix brachista HOM05D005273 ORTHO05D006195 6.1e-65 251.9 155 77.4
FvH4_6g26410 Fragaria vesca HOM05D005273 ORTHO05D006195 1.4e-64 250.8 161 75.8
Gohir.D11G064100 Gossypium hirsutum HOM05D005273 ORTHO05D006195 1.4e-64 250.8 151 78.8
Manes.02G045100 Manihot esculenta HOM05D005273 ORTHO05D006195 1.4e-64 250.8 157 75.8
Potri.007G139700 Populus trichocarpa HOM05D005273 ORTHO05D006195 1.4e-64 250.8 151 79.5
RcHm_v2.0_Chr2g0127911 Rosa chinensis HOM05D005273 ORTHO05D006195 1.4e-64 250.8 154 77.9
FAN02G4311 Fragaria x ananassa HOM05D005273 ORTHO05D006195 1.8e-64 250.4 161 75.8
FAN05G3218 Fragaria x ananassa HOM05D005273 ORTHO05D006195 2.3e-64 250.0 157 77.1
arahy.Tifrunner.gnm1.ann1.EEV1KR Arachis hypogaea HOM05D005273 ORTHO05D006195 4.0e-64 249.2 157 76.4
arahy.Tifrunner.gnm1.ann1.RDE8QD Arachis hypogaea HOM05D005273 ORTHO05D006195 4.0e-64 249.2 157 75.8
Duzib264G0403 Durio zibethinus HOM05D005273 ORTHO05D006195 6.8e-64 248.4 158 77.2
MD09G1233100 Malus domestica HOM05D005273 ORTHO05D006195 6.8e-64 248.4 155 76.1
GSVIVG01020564001 Vitis vinifera HOM05D005273 ORTHO05D006195 8.9e-64 248.1 167 72.5
PSO478G2492 Papaver somniferum HOM05D005273 ORTHO05D006195 1.2e-63 247.7 152 77.0
THA.LOC104823543 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 1.5e-63 247.3 163 73.0
arahy.Tifrunner.gnm1.ann1.891C6J Arachis hypogaea HOM05D005273 ORTHO05D006195 2.0e-63 246.9 157 75.8
CANSAT64G2205 Cannabis sativa HOM05D005273 ORTHO05D006195 3.4e-63 246.1 151 76.8
Migut.D02068 Erythranthe guttata HOM05D005273 ORTHO05D006195 4.4e-63 245.7 159 73.0
PSO782G4868 Papaver somniferum HOM05D005273 ORTHO05D006195 4.4e-63 245.7 152 75.7
CANSAT64G2383 Cannabis sativa HOM05D005273 ORTHO05D006195 9.8e-63 244.6 157 72.6
ClCG10G015250 Citrullus lanatus HOM05D005273 ORTHO05D006195 9.8e-63 244.6 167 72.5
COL.COLO4_33584 Corchorus olitorius HOM05D005273 ORTHO05D006195 9.8e-63 244.6 151 75.5
CiPaw.04G127500 Carya illinoinensis HOM05D005273 ORTHO05D006195 1.3e-62 244.2 157 73.9
MELO3C009854.2 Cucumis melo HOM05D005273 ORTHO05D006195 1.3e-62 244.2 167 71.9
Sc21g0002980 Simmondsia chinensis HOM05D005273 ORTHO05D006195 1.3e-62 244.2 161 71.4
MSTRG.21306 Avicennia marina HOM05D005273 ORTHO05D006195 1.7e-62 243.8 167 70.7
Nn1g06518 Nelumbo nucifera HOM05D005273 ORTHO05D006195 1.7e-62 243.8 155 77.4
Prupe.3G131200 Prunus persica HOM05D005273 ORTHO05D006195 1.7e-62 243.8 155 74.8
QL08p039365 Quercus lobata HOM05D005273 ORTHO05D006195 1.7e-62 243.8 157 74.5
CSS0011944 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 2.9e-62 243.0 156 74.4
CSS0048709 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 2.9e-62 243.0 156 74.4
Dinv04937 Davidia involucrata HOM05D005273 ORTHO05D006195 2.9e-62 243.0 157 73.2
Lj1C718T2 Lonicera japonica HOM05D005273 ORTHO05D006195 2.9e-62 243.0 151 75.5
SalBow1G1167 Salvia bowleyana HOM05D005273 ORTHO05D006195 2.9e-62 243.0 159 73.0
Solyc02g072105.1 Solanum lycopersicum HOM05D005273 ORTHO05D006195 2.9e-62 243.0 167 71.3
arahy.Tifrunner.gnm1.ann1.YR7R6W Arachis hypogaea HOM05D005273 ORTHO05D006195 3.7e-62 242.7 153 76.5
Hma1.2p1_0002F.1_g002020 Hydrangea macrophylla HOM05D005273 ORTHO05D006195 3.7e-62 242.7 156 74.4
Nn1g04120 Nelumbo nucifera HOM05D005273 ORTHO05D006195 3.7e-62 242.7 151 75.5
AL7G30590 Arabidopsis lyrata HOM05D005273 ORTHO05D006195 4.9e-62 242.3 166 71.1
Cc06_g20460 Coffea canephora HOM05D005273 ORTHO05D006195 4.9e-62 242.3 168 69.6
Haze_12807 Corylus avellana HOM05D005273 ORTHO05D006195 4.9e-62 242.3 157 73.2
DCAR_013064 Daucus carota HOM05D005273 ORTHO05D006195 4.9e-62 242.3 151 73.5
Ah.11g045620 Amaranthus hybridus HOM05D005273 ORTHO05D006195 6.4e-62 241.9 157 72.0
Duzib147G0196 Durio zibethinus HOM05D005273 ORTHO05D006195 6.4e-62 241.9 151 76.8
Sp7g21020 Schrenkiella parvula HOM05D005273 ORTHO05D006195 6.4e-62 241.9 157 72.6
PGSC0003DMG400028417 Solanum tuberosum HOM05D005273 ORTHO05D006195 6.4e-62 241.9 167 71.3
Thecc.K0007100 Theobroma cacao HOM05D005273 ORTHO05D006195 6.4e-62 241.9 151 75.5
BolC7t45723H Brassica oleracea HOM05D005273 ORTHO05D006195 8.3e-62 241.5 157 72.0
CAN.G411.45 Capsicum annuum HOM05D005273 ORTHO05D006195 8.3e-62 241.5 157 73.2
Ciclev10015816m.g Citrus clementina HOM05D005273 ORTHO05D006195 8.3e-62 241.5 151 75.5
A01p14180 Brassica napus HOM05D005273 ORTHO05D006195 1.1e-61 241.1 157 72.6
BraA01t01367Z Brassica rapa HOM05D005273 ORTHO05D006195 1.1e-61 241.1 157 72.6
CsaV3_3G041260 Cucumis sativus L. HOM05D005273 ORTHO05D006195 1.1e-61 241.1 167 70.7
Sopen02g021070 Solanum pennellii HOM05D005273 ORTHO05D006195 1.1e-61 241.1 167 70.7
HPP92_004898 Vanilla planifolia HOM05D005273 ORTHO05D006195 1.1e-61 241.1 157 73.9
Aa31LG2G13370 Aethionema arabicum HOM05D005273 ORTHO05D006195 1.4e-61 240.7 157 72.0
Carub.0007s1834 Capsella rubella HOM05D005273 ORTHO05D006195 1.4e-61 240.7 151 73.5
AUR62012902 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.4e-61 240.7 157 73.9
Glyma.12G114500 Glycine max HOM05D005273 ORTHO05D006195 1.4e-61 240.7 157 73.9
THA.LOC104814179 Tarenaya hassleriana HOM05D005273 ORTHO05D006195 1.4e-61 240.7 157 73.9
BcaNung01659 Brassica carinata HOM05D005273 ORTHO05D006195 1.9e-61 240.4 166 68.7
CARHR229970 Cardamine hirsuta HOM05D005273 ORTHO05D006195 1.9e-61 240.4 166 69.9
CDE08G0645 Ceratophyllum demersum HOM05D005273 ORTHO05D006195 1.9e-61 240.4 162 71.6
Sed0018091 Sechium edule HOM05D005273 ORTHO05D006195 1.9e-61 240.4 157 73.2
AT4G22930 Arabidopsis thaliana HOM05D005273 ORTHO05D006195 2.4e-61 240.0 166 70.5
Cpa.g.sc83.46 Carica papaya HOM05D005273 ORTHO05D006195 2.4e-61 240.0 151 75.5
ATR0737G119 Amborella trichopoda HOM05D005273 ORTHO05D006195 3.2e-61 239.6 151 75.5
A03p53890 Brassica napus HOM05D005273 ORTHO05D006195 3.2e-61 239.6 157 72.0
BraA03t14458Z Brassica rapa HOM05D005273 ORTHO05D006195 3.2e-61 239.6 157 72.0
Lalb_Chr03g0027211 Lupinus albus HOM05D005273 ORTHO05D006195 3.2e-61 239.6 157 72.6
Carub.0001s3611 Capsella rubella HOM05D005273 ORTHO05D006195 4.1e-61 239.2 151 73.5
ECA246G2010 Erigeron canadensis HOM05D005273 ORTHO05D006195 4.1e-61 239.2 168 70.2
Thhalv10025474m.g Eutrema salsugineum HOM05D005273 ORTHO05D006195 4.1e-61 239.2 157 72.0
SalBow1G7481 Salvia bowleyana HOM05D005273 ORTHO05D006195 4.1e-61 239.2 151 74.8
Lsat_1_v5_gn_4_66761 Lactuca sativa HOM05D005273 ORTHO05D006195 5.4e-61 238.8 167 68.9
Lj3g0011026 Lotus japonicus HOM05D005273 ORTHO05D006195 5.4e-61 238.8 157 73.9
HanXRQChr15g0466031 Helianthus annuus HOM05D005273 ORTHO05D006195 7.0e-61 238.4 151 72.2
Hund09652 Selenicereus undatus HOM05D005273 ORTHO05D006195 9.2e-61 238.0 157 72.0
C07p52300 Brassica napus HOM05D005273 ORTHO05D006195 1.6e-60 237.3 157 70.7
PGR142G4354 Punica granatum HOM05D005273 ORTHO05D006195 2.0e-60 236.9 157 72.0
SGA_v2.0_scaffold25G10971 Striga asiatica HOM05D005273 ORTHO05D006195 2.0e-60 236.9 161 71.4
Glyma.06G291600 Glycine max HOM05D005273 ORTHO05D006195 2.7e-60 236.5 157 71.3
VMungo1127G0137 Vigna mungo HOM05D005273 ORTHO05D006195 2.7e-60 236.5 157 72.0
QL08p039454 Quercus lobata HOM05D005273 ORTHO05D006195 3.5e-60 236.1 157 72.6
TWI59G0041 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 1.0e-59 234.6 165 69.7
Ca_18943_v3 Cicer arietinum L. HOM05D005273 ORTHO05D006195 1.3e-59 234.2 157 71.3
Medtr4g078370 Medicago truncatula HOM05D005273 ORTHO05D006195 1.7e-59 233.8 157 71.3
Phvul.010G107600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 1.7e-59 233.8 157 71.3
Phvul.011G119600 Phaseolus vulgaris HOM05D005273 ORTHO05D006195 1.7e-59 233.8 157 71.3
Psat7g169200 Pisum sativum HOM05D005273 ORTHO05D006195 3.0e-59 233.0 157 71.3
unitig_899.g15313 Utricularia gibba HOM05D005273 ORTHO05D006195 3.9e-59 232.6 151 73.5
Eucgr.K01040 Eucalyptus grandis HOM05D005273 ORTHO05D006195 5.0e-59 232.3 156 68.6
TWI18G0085 Tripterygium wilfordii HOM05D005273 ORTHO05D006195 5.0e-59 232.3 151 71.5
Aqoxy6G00048 Aquilegia oxysepala HOM05D005273 ORTHO05D006195 1.5e-58 230.7 151 70.9
SMO347G0496 Selaginella moellendorffii HOM05D005273 ORTHO05D006195 1.5e-58 230.7 160 69.4
Mapoly0001s0029 Marchantia polymorpha HOM05D005273 ORTHO05D006195 5.6e-58 228.8 156 70.5
Zm00001eb153030 Zea mays HOM05D005273 ORTHO05D006195 5.6e-58 228.8 150 69.3
Os01g0747500 Oryza sativa ssp. japonica HOM05D005273 ORTHO05D006195 3.6e-57 226.1 150 70.0
MBI07_g30188_MAGBIO Magnolia biondii HOM05D005273 ORTHO05D006195 1.4e-56 224.2 151 70.9
EL10Ac3g07435 Beta vulgaris HOM05D005273 ORTHO05D006195 1.2e-55 221.1 171 64.9
SHI10390 Sapria himalayana HOM05D005273 ORTHO05D006195 3.7e-54 216.1 157 65.0
Pp3c13_8930 Physcomitrium patens HOM05D005273 ORTHO05D006195 6.4e-54 215.3 154 67.5
AUR62011776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 9.2e-53 211.5 202 55.4
Peaxi162Scf00112g00113 Petunia axillaris HOM05D005273 ORTHO05D006195 3.5e-52 209.5 134 74.6
Cfa014627 Carpinus fangiana HOM05D005273 ORTHO05D006195 1.7e-51 207.2 139 71.9
C01p17440 Brassica napus HOM05D000022 ORTHO05D006195 1.6e-49 200.7 134 70.1
CBR_g21229 Chara braunii HOM05D005273 ORTHO05D006195 1.1e-48 198.0 148 63.5
vmacro12316 Vaccinium macrocarpon HOM05D005273 ORTHO05D006195 1.1e-48 198.0 249 45.8
Rhsim06G0140600 Rhododendron simsii HOM05D005273 ORTHO05D006195 2.3e-48 196.8 148 64.2
Lj5g0005541 Lotus japonicus HOM05D005273 ORTHO05D006195 4.6e-44 182.6 120 74.2
BcaC09g51057 Brassica carinata HOM05D000022 ORTHO05D006195 1.0e-43 181.4 168 56.5
PRCOL_00003989 Prasinoderma coloniale HOM05D005273 ORTHO05D006195 2.3e-43 180.3 168 54.8
MCO16G183 Micromonas commoda HOM05D005273 ORTHO05D006195 5.6e-42 175.6 152 57.9
Nitab4.5_0000437g0040 Nicotiana tabacum HOM05D005273 ORTHO05D006195 5.6e-42 175.6 127 70.9
Nitab4.5_0006070g0020 Nicotiana tabacum HOM05D005273 ORTHO05D006195 7.3e-42 175.3 127 70.9
CSS0013056 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 3.6e-41 172.9 120 68.3
Cre11.g467550 Chlamydomonas reinhardtii HOM05D005273 ORTHO05D006195 1.1e-40 171.4 147 57.1
AagrBONN_evm.TU.Sc2ySwM_117.50 Anthoceros agrestis HOM05D005273 ORTHO05D006195 1.8e-40 170.6 122 69.7
Haze_27262 Corylus avellana HOM05D005273 ORTHO05D006195 4.0e-40 169.5 152 54.6
CSS0022573 Camellia sinensis var. sinensis HOM05D005273 ORTHO05D006195 5.1e-35 152.5 169 50.3
Atru.chr6.2976 Acer truncatum HOM05D005273 ORTHO05D006195 1.5e-34 151.0 99 71.7
SEGI_07442 Sequoiadendron giganteum HOM05D008276 ORTHO05D010189 2.5e-34 150.2 169 50.9
Thecc.01G150900 Theobroma cacao HOM05D005273 ORTHO05D006195 1.2e-28 131.3 80 78.8
EL10Ac9g21222 Beta vulgaris HOM05D005273 ORTHO05D006195 2.8e-25 120.2 128 51.6
SEGI_25655 Sequoiadendron giganteum HOM05D009239 ORTHO05D007201 1.7e-22 110.9 89 60.7
AUR62011723 Chenopodium quinoa HOM05D005273 ORTHO05D006195 2.9e-22 110.2 71 74.6
SEGI_25227 Sequoiadendron giganteum HOM05D009239 ORTHO05D015310 1.4e-21 107.8 117 52.1
AUR62024621 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.9e-21 107.5 62 80.6
SEGI_31887 Sequoiadendron giganteum HOM05D005974 ORTHO05D007201 7.1e-21 105.5 95 55.8
SEGI_34481 Sequoiadendron giganteum HOM05D009239 ORTHO05D000002 2.5e-18 97.1 96 51.0
SEGI_02211 Sequoiadendron giganteum HOM05D009239 ORTHO05D026139 3.3e-18 96.7 170 38.8
SEGI_18051 Sequoiadendron giganteum HOM05D009239 ORTHO05D007201 3.3e-18 96.7 90 55.6
SEGI_37560 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 9.6e-18 95.1 82 54.9
SEGI_40002 Sequoiadendron giganteum HOM05D009239 ORTHO05D000002 9.6e-18 95.1 102 46.1
SEGI_01066 Sequoiadendron giganteum HOM05D004422 ORTHO05D007331 1.3e-17 94.7 76 63.2
SEGI_01165 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 2.8e-17 93.6 92 51.1
SEGI_39880 Sequoiadendron giganteum HOM05D009239 ORTHO05D008152 4.8e-17 92.8 66 63.6
SEGI_12076 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 1.4e-16 91.3 92 50.0
SEGI_19161 Sequoiadendron giganteum HOM05D009239 ORTHO05D014795 1.4e-16 91.3 92 51.1
SEGI_32350 Sequoiadendron giganteum HOM05D009239 ORTHO05D007201 4.0e-16 89.7 90 52.2
SEGI_35863 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 4.0e-16 89.7 92 48.9
SEGI_17545 Sequoiadendron giganteum HOM05D009239 ORTHO05D000002 5.3e-16 89.4 83 53.0
SEGI_37216 Sequoiadendron giganteum HOM05D015854 ORTHO05D005133 5.3e-16 89.4 99 49.5
SEGI_05058 Sequoiadendron giganteum HOM05D001582 ORTHO05D005133 1.2e-15 88.2 82 52.4
SEGI_08321 Sequoiadendron giganteum HOM05D004547 ORTHO05D005133 1.2e-15 88.2 99 47.5
SEGI_38937 Sequoiadendron giganteum HOM05D001582 ORTHO05D005133 1.2e-15 88.2 82 52.4
SEGI_35495 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 2.6e-15 87.0 92 48.9
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 5.8e-15 85.9 89 46.1
SEGI_34916 Sequoiadendron giganteum HOM05D009239 ORTHO05D007837 2.2e-14 84.0 134 36.6
SEGI_23597 Sequoiadendron giganteum HOM05D009239 ORTHO05D005806 3.8e-14 83.2 92 45.7
Cfa022577 Carpinus fangiana HOM05D005273 ORTHO05D006195 2.5e-13 80.5 165 36.4
SEGI_22152 Sequoiadendron giganteum HOM05D000239 ORTHO05D006195 3.2e-13 80.1 89 48.3
Lalb_Chr09g0333161 Lupinus albus HOM05D005273 ORTHO05D006195 3.5e-12 76.6 55 67.3
TPR.G31736 Trifolium pratense HOM05D005273 ORTHO05D006195 4.6e-12 76.3 45 80.0
SEGI_05085 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 5.1e-11 72.8 81 49.4
SEGI_38078 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 5.1e-11 72.8 79 48.1
BcaNung01011 Brassica carinata HOM05D005273 ORTHO05D006195 8.7e-11 72.0 68 58.8
SEGI_34006 Sequoiadendron giganteum HOM05D000688 ORTHO05D003888 8.7e-11 72.0 72 52.8
SEGI_29928 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.1e-10 71.6 81 48.1
SEGI_39939 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.1e-10 71.6 60 55.0
SEGI_15025 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 4.3e-10 69.7 106 40.6
SEGI_24515 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.3e-09 68.2 104 38.5
SEGI_40446 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 1.3e-09 68.2 108 39.8
BolC1t01684H Brassica oleracea HOM05D005273 ORTHO05D006195 2.1e-09 67.4 46 65.2
SEGI_23574 Sequoiadendron giganteum HOM05D005041 ORTHO05D006003 2.1e-09 67.4 75 49.3
SEGI_29464 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.8e-09 67.0 81 44.4
SEGI_09642 Sequoiadendron giganteum HOM05D015854 ORTHO05D005133 4.8e-09 66.2 81 44.4
Oeu007130.1 Olea europaea HOM05D005273 ORTHO05D006195 1.1e-08 65.1 56 50.0
SEGI_00154 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.4e-08 64.7 66 51.5
AUR62036776 Chenopodium quinoa HOM05D005273 ORTHO05D006195 1.5e-07 61.2 55 58.2
SEGI_12793 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 1.5e-07 61.2 79 44.3
SEGI_24910 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.0e-07 60.8 39 69.2
SEGI_37021 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 2.0e-07 60.8 39 69.2
SEGI_34076 Sequoiadendron giganteum HOM05D013703 ORTHO05D006624 2.6e-07 60.5 163 28.8
SEGI_00475 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 3.4e-07 60.1 131 35.1
SEGI_36218 Sequoiadendron giganteum HOM05D004140 ORTHO05D006116 4.5e-07 59.7 73 46.6
SEGI_39840 Sequoiadendron giganteum HOM05D042540 ORTHO05D006116 1.7e-06 57.8 64 48.4
SEGI_07005 Sequoiadendron giganteum HOM05D007858 ORTHO05D000002 8.4e-06 55.5 90 36.7
SEGI_31316 Sequoiadendron giganteum HOM05D000555 ORTHO05D000646 8.4e-06 55.5 65 47.7


User provided reference genes

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