Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10413 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 6.7e-90 334.0 164 100.0
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 7.3e-12 74.7 33 97.0
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 1.4e-07 60.5 34 67.6
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.4e-07 60.5 35 62.9
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 2.4e-07 59.7 34 64.7
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.2e-07 59.3 34 61.8
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 3.2e-07 59.3 34 61.8
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 3.2e-07 59.3 34 61.8
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 3.2e-07 59.3 34 64.7
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 4.2e-07 58.9 34 64.7
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 4.2e-07 58.9 34 64.7
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 4.2e-07 58.9 34 64.7
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 4.2e-07 58.9 34 61.8
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 4.2e-07 58.9 40 57.5
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 5.4e-07 58.5 34 61.8
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 7.1e-07 58.2 34 61.8
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 7.1e-07 58.2 34 61.8
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 64.7
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 64.7
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 64.7
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 64.7
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 64.7
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 9.3e-07 57.8 34 61.8
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 1.2e-06 57.4 34 61.8
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 1.2e-06 57.4 34 64.7
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 1.2e-06 57.4 34 61.8
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 1.6e-06 57.0 34 61.8
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 1.6e-06 57.0 34 61.8
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 2.1e-06 56.6 34 58.8
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 2.1e-06 56.6 34 58.8
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 2.1e-06 56.6 34 61.8
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 2.7e-06 56.2 40 55.0
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 3.5e-06 55.8 36 55.6
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 3.5e-06 55.8 33 60.6
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 3.5e-06 55.8 34 61.8
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 3.5e-06 55.8 34 61.8
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 3.5e-06 55.8 34 61.8
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 4.6e-06 55.5 34 58.8
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 4.6e-06 55.5 34 58.8
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 4.6e-06 55.5 34 58.8
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 4.6e-06 55.5 34 58.8
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 4.6e-06 55.5 33 60.6
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 6.0e-06 55.1 34 61.8
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 6.0e-06 55.1 34 61.8
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 6.0e-06 55.1 34 58.8
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 6.0e-06 55.1 34 58.8
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 6.0e-06 55.1 34 61.8
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 7.8e-06 54.7 34 61.8
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 7.8e-06 54.7 34 58.8
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 7.8e-06 54.7 32 59.4
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 7.8e-06 54.7 33 63.6


User provided reference genes

Program Settings