Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10369 Sequoiadendron giganteum HOM05D006223 ORTHO05D009080 1.9e-105 386.0 205 100.0
PSO170G6824 Papaver somniferum HOM05D006223 ORTHO05D009080 1.6e-27 127.1 146 54.1
Manes.12G113900 Manihot esculenta HOM05D006223 ORTHO05D009080 6.5e-26 121.7 159 50.3
Cc06_g22830 Coffea canephora HOM05D006223 ORTHO05D009080 8.5e-26 121.3 144 51.4
Sed0023944 Sechium edule HOM05D006223 ORTHO05D009080 1.1e-25 120.9 146 50.0
FAN28G1261 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.5e-25 119.8 148 51.4
Peaxi162Scf00548g00643 Petunia axillaris HOM05D006223 ORTHO05D009080 2.5e-25 119.8 156 48.1
FAN26G2055 Fragaria x ananassa HOM05D006223 ORTHO05D009080 3.2e-25 119.4 148 51.4
Nitab4.5_0000142g0070 Nicotiana tabacum HOM05D006223 ORTHO05D009080 4.2e-25 119.0 146 50.0
MELO3C020909.2 Cucumis melo HOM05D006223 ORTHO05D009080 7.2e-25 118.2 146 51.4
Nitab4.5_0002119g0100 Nicotiana tabacum HOM05D006223 ORTHO05D009080 9.4e-25 117.9 146 48.6
Cfa004130 Carpinus fangiana HOM05D006223 ORTHO05D009080 1.6e-24 117.1 168 48.2
FAN19G0818 Fragaria x ananassa HOM05D006223 ORTHO05D009080 2.1e-24 116.7 146 50.7
CSS0009729 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 3.6e-24 115.9 171 46.2
Aqoxy5G00869 Aquilegia oxysepala HOM05D006223 ORTHO05D009080 6.1e-24 115.2 150 48.7
Haze_15285 Corylus avellana HOM05D006223 ORTHO05D009080 1.0e-23 114.4 191 44.5
FvH4_1g17670 Fragaria vesca HOM05D006223 ORTHO05D009080 1.0e-23 114.4 148 50.7
CANSAT01G0277 Cannabis sativa HOM05D006223 ORTHO05D009080 1.8e-23 113.6 148 47.3
Eucgr.I00706 Eucalyptus grandis HOM05D006223 ORTHO05D009080 1.8e-23 113.6 157 45.9
Sopen02g036940 Solanum pennellii HOM05D006223 ORTHO05D009080 4.0e-23 112.5 149 46.3
SGA_v2.0_scaffold72G24074 Striga asiatica HOM05D006223 ORTHO05D009080 4.0e-23 112.5 161 45.3
ATR1153G042 Amborella trichopoda HOM05D006223 ORTHO05D009080 5.2e-23 112.1 146 46.6
Dinv04050 Davidia involucrata HOM05D006223 ORTHO05D009080 6.8e-23 111.7 146 46.6
PGSC0003DMG400021418 Solanum tuberosum HOM05D006223 ORTHO05D009080 6.8e-23 111.7 149 46.3
AUR62004007 Chenopodium quinoa HOM05D006223 ORTHO05D009080 8.8e-23 111.3 145 47.6
Solyc02g092390.3 Solanum lycopersicum HOM05D006223 ORTHO05D009080 8.8e-23 111.3 149 46.3
RcHm_v2.0_Chr2g0108001 Rosa chinensis HOM05D006223 ORTHO05D009080 1.2e-22 110.9 144 49.3
CiPaw.01G004700 Carya illinoinensis HOM05D006223 ORTHO05D009080 1.5e-22 110.5 146 50.0
TAR625G1165 Trochodendron aralioides HOM05D006223 ORTHO05D009080 2.0e-22 110.2 173 43.9
vmacro05408 Vaccinium macrocarpon HOM05D006223 ORTHO05D009080 3.4e-22 109.4 196 36.7
AUR62040240 Chenopodium quinoa HOM05D006223 ORTHO05D009080 5.7e-22 108.6 146 46.6
MD15G1297100 Malus domestica HOM05D006223 ORTHO05D009080 5.7e-22 108.6 148 50.7
Lj7A96T45 Lonicera japonica HOM05D006223 ORTHO05D009080 7.5e-22 108.2 146 47.3
Nn5g30588 Nelumbo nucifera HOM05D006223 ORTHO05D009080 7.5e-22 108.2 146 48.6
Hund16399 Selenicereus undatus HOM05D006223 ORTHO05D009080 9.8e-22 107.8 146 45.9
Lj4g0019733 Lotus japonicus HOM05D006223 ORTHO05D009080 1.3e-21 107.5 147 46.9
Ah.03g140550 Amaranthus hybridus HOM05D006223 ORTHO05D009080 2.2e-21 106.7 159 41.5
PGR004G2352 Punica granatum HOM05D006223 ORTHO05D009080 2.2e-21 106.7 146 45.9
HPP92_024913 Vanilla planifolia HOM05D006223 ORTHO05D009080 2.2e-21 106.7 151 49.0
GSVIVG01000118001 Vitis vinifera HOM05D006223 ORTHO05D009080 2.2e-21 106.7 165 45.5
CAN.G1075.35 Capsicum annuum HOM05D006223 ORTHO05D009080 2.8e-21 106.3 167 41.9
HanXRQChr15g0472641 Helianthus annuus HOM05D006223 ORTHO05D009080 2.8e-21 106.3 146 45.2
GSVIVG01000109001 Vitis vinifera HOM05D006223 ORTHO05D009080 3.7e-21 105.9 165 44.8
ECA246G3554 Erigeron canadensis HOM05D006223 ORTHO05D009080 4.8e-21 105.5 147 47.6
Psat4g081960 Pisum sativum HOM05D006223 ORTHO05D009080 8.3e-21 104.8 171 42.1
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 8.3e-21 104.8 163 42.9
TPR.G24252 Trifolium pratense HOM05D006223 ORTHO05D009080 1.4e-20 104.0 146 45.2
Sabra01G0139200 Salix brachista HOM05D006223 ORTHO05D009080 1.8e-20 103.6 174 42.5
Phvul.003G235100 Phaseolus vulgaris HOM05D006223 ORTHO05D009080 2.4e-20 103.2 151 46.4
Prupe.6G221000 Prunus persica HOM05D006223 ORTHO05D009080 2.4e-20 103.2 147 47.6
CDE06G0771 Ceratophyllum demersum HOM05D006223 ORTHO05D009080 3.1e-20 102.8 145 45.5
Ciclev10026365m.g Citrus clementina HOM05D006223 ORTHO05D009080 3.1e-20 102.8 146 47.3
Gorai.007G223400 Gossypium raimondii HOM05D006223 ORTHO05D009080 3.1e-20 102.8 146 43.8
Lsat_1_v5_gn_3_86181 Lactuca sativa HOM05D006223 ORTHO05D009080 3.1e-20 102.8 147 45.6
Medtr4g097030 Medicago truncatula HOM05D006223 ORTHO05D009080 3.1e-20 102.8 153 42.5
DCAR_025799 Daucus carota HOM05D006223 ORTHO05D009080 5.4e-20 102.1 180 40.0
Gohir.D11G208400 Gossypium hirsutum HOM05D006223 ORTHO05D009080 9.1e-20 101.3 146 43.2
Rhsim10G0099700 Rhododendron simsii HOM05D006223 ORTHO05D009080 9.1e-20 101.3 160 40.0
Cpa.g.sc6.19 Carica papaya HOM05D006223 ORTHO05D009080 2.0e-19 100.1 145 47.6
Migut.H00350 Erythranthe guttata HOM05D006223 ORTHO05D009080 2.0e-19 100.1 146 42.5
Zm00001eb400790 Zea mays HOM05D006223 ORTHO05D009080 2.0e-19 100.1 145 43.4
Actinidia11984 Actinidia chinensis HOM05D006223 ORTHO05D009080 2.7e-19 99.8 151 43.7
Duzib147G0613 Durio zibethinus HOM05D006223 ORTHO05D009080 2.7e-19 99.8 146 44.5
Ca_22107_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 3.5e-19 99.4 186 39.2
Ca_22114_v3 Cicer arietinum L. HOM05D006223 ORTHO05D009080 3.5e-19 99.4 186 39.2
CSS0032370 Camellia sinensis var. sinensis HOM05D006223 ORTHO05D009080 4.5e-19 99.0 86 64.0
Glyma.17G160900 Glycine max HOM05D006223 ORTHO05D009080 4.5e-19 99.0 174 40.8
Glyma.05G105500 Glycine max HOM05D006223 ORTHO05D009080 5.9e-19 98.6 173 42.2
Gohir.A11G215000 Gossypium hirsutum HOM05D006223 ORTHO05D009080 1.0e-18 97.8 165 40.0
MSTRG.23673 Avicennia marina HOM05D006223 ORTHO05D009080 1.3e-18 97.4 168 38.1
Hma1.2p1_0852F.1_g228470 Hydrangea macrophylla HOM05D006223 ORTHO05D009080 1.3e-18 97.4 113 50.4
THA.LOC104827599 Tarenaya hassleriana HOM05D006223 ORTHO05D009080 1.7e-18 97.1 150 42.0
Lalb_Chr05g0225861 Lupinus albus HOM05D006223 ORTHO05D009080 2.3e-18 96.7 169 42.0
Atru.chr3.1008 Acer truncatum HOM05D006223 ORTHO05D009080 2.9e-18 96.3 146 43.2
Potri.001G172500 Populus trichocarpa HOM05D006223 ORTHO05D009080 8.6e-18 94.7 173 39.9
VMungo0251G3324 Vigna mungo HOM05D006223 ORTHO05D009080 8.6e-18 94.7 175 41.7
TWI73G0604 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 1.5e-17 94.0 169 41.4
TWI09G0585 Tripterygium wilfordii HOM05D006223 ORTHO05D009080 2.5e-17 93.2 169 40.8
AagrBONN_evm.TU.Sc2ySwM_228.3102 Anthoceros agrestis HOM05D004796 ORTHO05D006527 3.2e-17 92.8 155 41.9
AT3G49890 Arabidopsis thaliana HOM05D006223 ORTHO05D009080 4.2e-17 92.4 145 42.1
ClCG02G012630 Citrullus lanatus HOM05D003401 ORTHO05D003906 7.2e-17 91.7 132 44.7
Os03g0201200 Oryza sativa ssp. japonica HOM05D006223 ORTHO05D009080 9.5e-17 91.3 145 42.8
arahy.Tifrunner.gnm1.ann1.BP3FRD Arachis hypogaea HOM05D006223 ORTHO05D009080 1.2e-16 90.9 154 42.2
AL5G29900 Arabidopsis lyrata HOM05D006223 ORTHO05D009080 4.7e-16 89.0 145 40.7
Aa31LG4G18340 Aethionema arabicum HOM05D006223 ORTHO05D009080 8.8e-15 84.7 147 38.1
arahy.Tifrunner.gnm1.ann1.83HTFG Arachis hypogaea HOM05D006223 ORTHO05D009080 9.8e-14 81.3 86 50.0
EL10Ac6g15621 Beta vulgaris HOM05D006223 ORTHO05D009080 9.8e-14 81.3 146 39.7
CARHR158970 Cardamine hirsuta HOM05D006223 ORTHO05D009080 1.3e-13 80.9 145 37.9
Sp5g12220 Schrenkiella parvula HOM05D006223 ORTHO05D009080 2.4e-12 76.6 143 37.1
Pp3c5_6560 Physcomitrium patens HOM05D006223 ORTHO05D009080 5.4e-12 75.5 154 36.4
Thhalv10010709m.g Eutrema salsugineum HOM05D006223 ORTHO05D009080 2.7e-11 73.2 158 34.8
BraA03t13871Z Brassica rapa HOM05D006223 ORTHO05D009080 3.5e-11 72.8 179 31.8
Carub.0005s1625 Capsella rubella HOM05D006223 ORTHO05D009080 1.3e-10 70.9 158 33.5
A03p47580 Brassica napus HOM05D006223 ORTHO05D009080 2.3e-10 70.1 179 31.8
C07p45560 Brassica napus HOM05D006223 ORTHO05D009080 6.6e-10 68.6 179 30.7
BolC7t45077H Brassica oleracea HOM05D006223 ORTHO05D009080 6.6e-10 68.6 179 30.7
HPP92_024909 Vanilla planifolia HOM05D006223 ORTHO05D009080 1.9e-09 67.0 68 57.4
SMO145G0277 Selaginella moellendorffii HOM05D034328 ORTHO05D009080 3.3e-09 66.2 136 38.2
unitig_21.g20422 Utricularia gibba HOM05D005082 ORTHO05D006474 1.6e-08 63.9 75 50.7
Mapoly0001s0294 Marchantia polymorpha HOM05D006223 ORTHO05D009080 2.1e-08 63.5 150 35.3
FAN23G0832 Fragaria x ananassa HOM05D006223 ORTHO05D009080 1.0e-07 61.2 54 63.0


User provided reference genes

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