Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10296 Sequoiadendron giganteum HOM05D001536 ORTHO05D008293 4.7e-230 800.8 397 100.0
SEGI_16187 Sequoiadendron giganteum HOM05D001536 ORTHO05D001442 7.6e-47 192.2 327 37.0
SEGI_03234 Sequoiadendron giganteum HOM05D001536 ORTHO05D001442 4.3e-42 176.4 329 38.9
TAR371G0889 Trochodendron aralioides HOM05D001536 ORTHO05D001442 9.7e-18 95.5 212 35.4
TAR629G1896 Trochodendron aralioides HOM05D001536 ORTHO05D001442 2.4e-16 90.9 209 34.0
Nn4g23320 Nelumbo nucifera HOM05D001536 ORTHO05D001442 1.3e-14 85.1 341 27.0
MBI16_g38083_MAGBIO Magnolia biondii HOM05D007665 ORTHO05D008293 2.9e-14 84.0 279 30.8
Dinv34112 Davidia involucrata HOM05D001536 ORTHO05D001442 8.5e-14 82.4 199 32.2
TAR622G0794 Trochodendron aralioides HOM05D001536 ORTHO05D001442 1.1e-13 82.0 202 32.2
Nn3g17370 Nelumbo nucifera HOM05D001536 ORTHO05D001442 5.5e-13 79.7 334 26.0
ATR0580G179 Amborella trichopoda HOM05D007665 ORTHO05D008293 1.2e-12 78.6 218 31.2
MBI19_g16681_MAGBIO Magnolia biondii HOM05D001536 ORTHO05D001442 1.0e-11 75.5 209 30.6
TAR374G1508 Trochodendron aralioides HOM05D001536 ORTHO05D001442 2.3e-11 74.3 197 30.5
CSS0031318 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 3.0e-11 73.9 271 28.4
CSS0031748 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 3.0e-11 73.9 271 28.4
Oeu057649.1 Olea europaea HOM05D001536 ORTHO05D001442 4.0e-11 73.6 269 27.9
FAN22G0581 Fragaria x ananassa HOM05D001536 ORTHO05D001442 1.5e-10 71.6 208 30.3
ATR0111G010 Amborella trichopoda HOM05D001536 ORTHO05D001442 3.3e-10 70.5 207 31.4
Haze_14477 Corylus avellana HOM05D001536 ORTHO05D001442 3.3e-10 70.5 164 32.9
FvH4_4g30520 Fragaria vesca HOM05D001536 ORTHO05D001442 4.4e-10 70.1 183 29.5
FAN12G2957 Fragaria x ananassa HOM05D001536 ORTHO05D001442 4.4e-10 70.1 183 29.5
FAN17G0931 Fragaria x ananassa HOM05D001536 ORTHO05D001442 7.5e-10 69.3 183 30.1
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.3e-09 68.6 159 31.4
FAN07G0538 Fragaria x ananassa HOM05D001536 ORTHO05D001442 2.2e-09 67.8 208 30.3
SEGI_07957 Sequoiadendron giganteum HOM05D001536 ORTHO05D001442 2.2e-09 67.8 122 41.0
Oeu016756.1 Olea europaea HOM05D001536 ORTHO05D001442 3.7e-09 67.0 405 26.9
Potri.010G162000 Populus trichocarpa HOM05D001536 ORTHO05D001442 3.7e-09 67.0 224 27.7
CSS0012767 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 4.8e-09 66.6 199 29.6
CDE07G1318 Ceratophyllum demersum HOM05D001536 ORTHO05D001442 4.8e-09 66.6 230 28.7
Mapoly0124s0050 Marchantia polymorpha HOM05D001536 ORTHO05D001442 4.8e-09 66.6 296 27.0
QL10p018539 Quercus lobata HOM05D001536 ORTHO05D001442 6.3e-09 66.2 177 28.8
CSS0049375 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 8.2e-09 65.9 165 30.9
VMungo0251G0497 Vigna mungo HOM05D001536 ORTHO05D001442 8.2e-09 65.9 249 27.3
RcHm_v2.0_Chr4g0438891 Rosa chinensis HOM05D001536 ORTHO05D001442 1.1e-08 65.5 209 29.2
Lj3C1032T12 Lonicera japonica HOM05D001536 ORTHO05D001442 1.4e-08 65.1 205 29.3
Sabra10G0123100 Salix brachista HOM05D001536 ORTHO05D001442 1.4e-08 65.1 264 26.1
Atru.chr11.1694 Acer truncatum HOM05D001536 ORTHO05D001442 1.8e-08 64.7 192 27.6
Actinidia12316 Actinidia chinensis HOM05D001536 ORTHO05D001442 1.8e-08 64.7 168 33.3
Phvul.002G167700 Phaseolus vulgaris HOM05D001536 ORTHO05D001442 1.8e-08 64.7 221 29.9
TAR625G0485 Trochodendron aralioides HOM05D007665 ORTHO05D008293 1.8e-08 64.7 272 26.8
TWI32G0259 Tripterygium wilfordii HOM05D001536 ORTHO05D001442 2.4e-08 64.3 162 31.5
Sc04g0007760 Simmondsia chinensis HOM05D001536 ORTHO05D001442 3.1e-08 63.9 155 31.0
Duzib147G0949 Durio zibethinus HOM05D001536 ORTHO05D001442 4.1e-08 63.5 161 29.8
MD13G1066200 Malus domestica HOM05D001536 ORTHO05D001442 4.1e-08 63.5 196 28.1
Cfa019289 Carpinus fangiana HOM05D001536 ORTHO05D001442 5.3e-08 63.2 165 28.5
MD16G1065200 Malus domestica HOM05D001536 ORTHO05D001442 5.3e-08 63.2 179 29.6
PSO017G3159 Papaver somniferum HOM05D001536 ORTHO05D001442 5.3e-08 63.2 195 30.8
Potri.008G092800 Populus trichocarpa HOM05D001536 ORTHO05D001442 5.3e-08 63.2 216 28.2
Thecc.02G336800 Theobroma cacao HOM05D001536 ORTHO05D001442 5.3e-08 63.2 176 28.4
Dinv33801 Davidia involucrata HOM05D001536 ORTHO05D001442 1.2e-07 62.0 215 31.2
Rhsim12G0134000 Rhododendron simsii HOM05D001536 ORTHO05D001442 1.2e-07 62.0 228 27.6
Sc11g0002250 Simmondsia chinensis HOM05D001536 ORTHO05D001442 1.2e-07 62.0 292 24.7
Dinv38761 Davidia involucrata HOM05D001536 ORTHO05D001442 1.6e-07 61.6 171 29.2
Haze_11937 Corylus avellana HOM05D001536 ORTHO05D001442 2.0e-07 61.2 153 31.4
QL03p070806 Quercus lobata HOM05D001536 ORTHO05D001442 2.0e-07 61.2 223 26.0
Thecc.04G089400 Theobroma cacao HOM05D001536 ORTHO05D001442 2.0e-07 61.2 154 29.9
vmacro16367 Vaccinium macrocarpon HOM05D001536 ORTHO05D001442 2.0e-07 61.2 150 30.0
Actinidia31950 Actinidia chinensis HOM05D001536 ORTHO05D000003 2.6e-07 60.8 181 28.7
CANSAT64G3017 Cannabis sativa HOM05D001536 ORTHO05D001442 2.6e-07 60.8 223 29.1
Haze_21953 Corylus avellana HOM05D007665 ORTHO05D008293 2.6e-07 60.8 279 27.6
Glyma.20G027500 Glycine max HOM05D001536 ORTHO05D001442 2.6e-07 60.8 166 30.1
Gohir.D05G305900 Gossypium hirsutum HOM05D001536 ORTHO05D001442 2.6e-07 60.8 163 30.1
Gorai.009G325900 Gossypium raimondii HOM05D001536 ORTHO05D001442 2.6e-07 60.8 163 30.1
Prupe.1G281700 Prunus persica HOM05D001536 ORTHO05D001442 2.6e-07 60.8 197 28.9
COL.COLO4_12250 Corchorus olitorius HOM05D001536 ORTHO05D001442 3.5e-07 60.5 154 28.6
Haze_07670 Corylus avellana HOM05D001536 ORTHO05D001442 3.5e-07 60.5 171 26.3
Glyma.07G227100 Glycine max HOM05D001536 ORTHO05D001442 3.5e-07 60.5 189 29.1
Manes.05G107500 Manihot esculenta HOM05D001536 ORTHO05D001442 3.5e-07 60.5 168 30.4
Gohir.D12G165600 Gossypium hirsutum HOM05D001536 ORTHO05D001442 4.5e-07 60.1 178 28.1
PSO478G3501 Papaver somniferum HOM05D001536 ORTHO05D001442 4.5e-07 60.1 195 29.7
Actinidia09237 Actinidia chinensis HOM05D000001 ORTHO05D000003 5.9e-07 59.7 168 28.6
C06p40560 Brassica napus HOM05D001536 ORTHO05D001442 5.9e-07 59.7 154 28.6
BolC6t39375H Brassica oleracea HOM05D001536 ORTHO05D001442 5.9e-07 59.7 154 28.6
Duzib251G0780 Durio zibethinus HOM05D001536 ORTHO05D001442 5.9e-07 59.7 176 27.8
Gorai.008G178300 Gossypium raimondii HOM05D001536 ORTHO05D001442 5.9e-07 59.7 163 27.0
Prupe.3G261200 Prunus persica HOM05D001536 ORTHO05D001442 5.9e-07 59.7 163 30.7
MSTRG.13440 Avicennia marina HOM05D001536 ORTHO05D001442 7.7e-07 59.3 282 24.5
CSS0003937 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 7.7e-07 59.3 199 28.6
Ciclev10030574m.g Citrus clementina HOM05D001536 ORTHO05D001442 7.7e-07 59.3 218 27.1
Gohir.A12G162600 Gossypium hirsutum HOM05D001536 ORTHO05D001442 7.7e-07 59.3 163 27.0
Lj6A782T115 Lonicera japonica HOM05D001536 ORTHO05D001442 7.7e-07 59.3 189 30.2
QL11p005089 Quercus lobata HOM05D007665 ORTHO05D008293 7.7e-07 59.3 316 24.7
Sabra08G0069600 Salix brachista HOM05D001536 ORTHO05D001442 7.7e-07 59.3 178 27.0
A07p35660 Brassica napus HOM05D001536 ORTHO05D001442 1.0e-06 58.9 152 28.9
BraA07t31154Z Brassica rapa HOM05D001536 ORTHO05D001442 1.0e-06 58.9 152 28.9
Cfa007616 Carpinus fangiana HOM05D001536 ORTHO05D001442 1.0e-06 58.9 167 31.1
Dinv21608 Davidia involucrata HOM05D007929 ORTHO05D008690 1.0e-06 58.9 153 30.7
Gorai.013G090900 Gossypium raimondii HOM05D001536 ORTHO05D001442 1.0e-06 58.9 153 30.1
Hma1.2p1_0354F.1_g133660 Hydrangea macrophylla HOM05D001536 ORTHO05D001442 1.0e-06 58.9 153 30.1
Actinidia19923 Actinidia chinensis HOM05D001536 ORTHO05D001442 1.3e-06 58.5 158 28.5
CANSAT11G1651 Cannabis sativa HOM05D007665 ORTHO05D008293 1.3e-06 58.5 256 29.7
Duzib248G0148 Durio zibethinus HOM05D001536 ORTHO05D001442 1.3e-06 58.5 164 29.3
Lj4g0002221 Lotus japonicus HOM05D001536 ORTHO05D001442 1.3e-06 58.5 166 33.1
Nitab4.5_0002756g0060 Nicotiana tabacum HOM05D001536 ORTHO05D001442 1.3e-06 58.5 153 31.4
Peaxi162Scf00274g00008 Petunia axillaris HOM05D001536 ORTHO05D001442 1.3e-06 58.5 161 30.4
Atru.chr9.313 Acer truncatum HOM05D001536 ORTHO05D001442 1.7e-06 58.2 238 25.2
Cpa.g.sc13.308 Carica papaya HOM05D001536 ORTHO05D001442 1.7e-06 58.2 205 27.8
CiPaw.08G034700 Carya illinoinensis HOM05D007665 ORTHO05D008293 1.7e-06 58.2 119 35.3
Manes.01G030700 Manihot esculenta HOM05D001536 ORTHO05D001442 1.7e-06 58.2 215 27.0
PGR119G0403 Punica granatum HOM05D001536 ORTHO05D001442 1.7e-06 58.2 166 32.5
CANSAT50G0006 Cannabis sativa HOM05D001536 ORTHO05D001442 2.2e-06 57.8 155 32.3
ClCG05G023880 Citrullus lanatus HOM05D001536 ORTHO05D001442 2.2e-06 57.8 173 32.9
MD17G1054900 Malus domestica HOM05D001536 ORTHO05D001442 2.2e-06 57.8 170 32.4
Nitab4.5_0000334g0200 Nicotiana tabacum HOM05D001536 ORTHO05D001442 2.2e-06 57.8 257 27.2
Cfa008911 Carpinus fangiana HOM05D001536 ORTHO05D001442 2.9e-06 57.4 158 31.0
Lalb_Chr05g0220121 Lupinus albus HOM05D001536 ORTHO05D001442 2.9e-06 57.4 154 32.5
MBI04_g37591_MAGBIO Magnolia biondii HOM05D007929 ORTHO05D008690 2.9e-06 57.4 316 26.3
Rhsim01G0002100 Rhododendron simsii HOM05D007665 ORTHO05D008293 2.9e-06 57.4 128 35.2
CAN.G1340.15 Capsicum annuum HOM05D001536 ORTHO05D001442 3.8e-06 57.0 252 26.2
COL.COLO4_27938 Corchorus olitorius HOM05D001536 ORTHO05D001442 3.8e-06 57.0 176 26.7
CsaV3_5G033140 Cucumis sativus L. HOM05D001536 ORTHO05D001442 3.8e-06 57.0 173 32.9
AUR62007958 Chenopodium quinoa HOM05D001536 ORTHO05D001442 5.0e-06 56.6 152 30.9
Duzib268G0567 Durio zibethinus HOM05D001536 ORTHO05D001442 5.0e-06 56.6 154 31.2
Lalb_Chr09g0329111 Lupinus albus HOM05D001536 ORTHO05D001442 5.0e-06 56.6 166 29.5
Sc04g0002960 Simmondsia chinensis HOM05D001536 ORTHO05D001442 5.0e-06 56.6 169 30.2
GSVIVG01029234001 Vitis vinifera HOM05D007665 ORTHO05D008293 5.0e-06 56.6 89 41.6
Aqoxy3G03549 Aquilegia oxysepala HOM05D001536 ORTHO05D001442 6.5e-06 56.2 192 27.6
CAN.G479.42 Capsicum annuum HOM05D001536 ORTHO05D001442 6.5e-06 56.2 154 31.8
Gohir.A05G305900 Gossypium hirsutum HOM05D001536 ORTHO05D001442 6.5e-06 56.2 163 27.6
VMungo1215G2164 Vigna mungo HOM05D001536 ORTHO05D001442 6.5e-06 56.2 164 28.0
GSVIVG01012173001 Vitis vinifera HOM05D001536 ORTHO05D001442 6.5e-06 56.2 153 29.4
ATR0030G044 Amborella trichopoda HOM05D004032 ORTHO05D004462 8.5e-06 55.8 76 46.1
AUR62003138 Chenopodium quinoa HOM05D001536 ORTHO05D001442 8.5e-06 55.8 184 28.8
Gohir.A13G079800 Gossypium hirsutum HOM05D001536 ORTHO05D001442 8.5e-06 55.8 153 27.5
Lj2g0017216 Lotus japonicus HOM05D001536 ORTHO05D001442 8.5e-06 55.8 174 29.9


User provided reference genes

Program Settings