Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10257 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 5.2e-195 684.1 326 100.0
SEGI_25273 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 5.3e-22 109.4 124 45.2
Mapoly0047s0036 Marchantia polymorpha HOM05D001188 ORTHO05D001032 2.2e-15 87.4 124 39.5
SEGI_40728 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 5.3e-14 82.8 118 39.8
Pp3c14_18120 Physcomitrium patens HOM05D001188 ORTHO05D001032 5.9e-13 79.3 117 42.7
PSO017G4726 Papaver somniferum HOM05D001188 ORTHO05D015292 1.5e-11 74.7 132 31.8
PSO478G2914 Papaver somniferum HOM05D001188 ORTHO05D015292 1.9e-11 74.3 132 31.8
SEGI_00322 Sequoiadendron giganteum HOM05D001188 ORTHO05D383942 3.2e-11 73.6 36 86.1
Pp3c20_7460 Physcomitrium patens HOM05D001188 ORTHO05D001032 7.2e-11 72.4 118 38.1
HPP92_020115 Vanilla planifolia HOM05D030760 ORTHO05D015292 2.7e-10 70.5 130 34.6
Pp3c20_7510 Physcomitrium patens HOM05D001188 ORTHO05D001032 3.6e-10 70.1 118 37.3
SEGI_37570 Sequoiadendron giganteum HOM05D001188 ORTHO05D001032 3.6e-10 70.1 124 33.9
DCAR_030157 Daucus carota HOM05D001188 ORTHO05D001032 8.0e-10 68.9 140 34.3
Thecc.04G134100 Theobroma cacao HOM05D001188 ORTHO05D001032 1.8e-09 67.8 148 33.1
Lj3C1014T9 Lonicera japonica HOM05D001188 ORTHO05D001032 4.0e-09 66.6 135 34.1
CiPaw.04G042000 Carya illinoinensis HOM05D001188 ORTHO05D001032 5.2e-09 66.2 136 37.5
MBI11_g43076_MAGBIO Magnolia biondii HOM05D001188 ORTHO05D015292 6.8e-09 65.9 129 31.0
Ciclev10022616m.g Citrus clementina HOM05D001188 ORTHO05D001032 8.8e-09 65.5 125 34.4
Gohir.A12G054100 Gossypium hirsutum HOM05D001188 ORTHO05D001032 1.5e-08 64.7 139 30.9
Lalb_Chr17g0335871 Lupinus albus HOM05D001188 ORTHO05D001032 1.5e-08 64.7 128 32.8
Dinv21083 Davidia involucrata HOM05D001188 ORTHO05D001032 3.4e-08 63.5 134 32.8
Duzib138G1765 Durio zibethinus HOM05D001188 ORTHO05D001032 4.4e-08 63.2 145 33.1
Lj6A758T16 Lonicera japonica HOM05D001188 ORTHO05D001032 4.4e-08 63.2 142 33.8
COL.COLO4_09325 Corchorus olitorius HOM05D001188 ORTHO05D001032 5.7e-08 62.8 143 32.9
Nn4g23850 Nelumbo nucifera HOM05D001188 ORTHO05D001032 5.7e-08 62.8 139 33.1
Hund02389 Selenicereus undatus HOM05D001188 ORTHO05D001032 5.7e-08 62.8 128 36.7
DCAR_026733 Daucus carota HOM05D001188 ORTHO05D001032 7.5e-08 62.4 142 33.8
Hma1.2p1_0061F.1_g033860 Hydrangea macrophylla HOM05D001188 ORTHO05D001032 9.8e-08 62.0 135 33.3
ATR1125G036 Amborella trichopoda HOM05D001188 ORTHO05D001032 1.3e-07 61.6 102 41.2
Gorai.008G055900 Gossypium raimondii HOM05D001188 ORTHO05D001032 1.3e-07 61.6 139 30.2
MBI16_g35167_MAGBIO Magnolia biondii HOM05D001188 ORTHO05D001032 1.3e-07 61.6 133 33.8
Pp3c2_5690 Physcomitrium patens HOM05D001188 ORTHO05D001032 1.3e-07 61.6 100 38.0
GSVIVG01011892001 Vitis vinifera HOM05D001188 ORTHO05D001032 1.3e-07 61.6 138 31.2
Gohir.D12G052700 Gossypium hirsutum HOM05D001188 ORTHO05D001032 1.7e-07 61.2 139 30.2
Atru.chr9.860 Acer truncatum HOM05D001188 ORTHO05D001032 2.2e-07 60.8 139 30.9
TPR.G32445 Trifolium pratense HOM05D001188 ORTHO05D001032 2.2e-07 60.8 129 37.2
Dinv31636 Davidia involucrata HOM05D001188 ORTHO05D001032 2.8e-07 60.5 137 32.1
Prupe.3G157300 Prunus persica HOM05D001188 ORTHO05D001032 2.8e-07 60.5 128 32.0
ATR0582G282 Amborella trichopoda HOM05D001188 ORTHO05D015292 3.7e-07 60.1 118 31.4
Os05g0102500 Oryza sativa ssp. japonica HOM05D001188 ORTHO05D001032 3.7e-07 60.1 124 32.3
Ca_13733_v3 Cicer arietinum L. HOM05D001188 ORTHO05D001032 6.3e-07 59.3 127 31.5
Glyma.08G365500 Glycine max HOM05D001188 ORTHO05D001032 8.3e-07 58.9 133 32.3
SMO145G0018 Selaginella moellendorffii HOM05D001188 ORTHO05D001032 8.3e-07 58.9 124 30.6
Hund16155 Selenicereus undatus HOM05D001188 ORTHO05D001032 8.3e-07 58.9 119 31.1
CSS0010207 Camellia sinensis var. sinensis HOM05D001188 ORTHO05D001032 1.1e-06 58.5 138 31.9
Cpa.g.sc3.511 Carica papaya HOM05D001188 ORTHO05D001032 1.1e-06 58.5 89 36.0
Lalb_Chr06g0174581 Lupinus albus HOM05D001188 ORTHO05D001032 1.1e-06 58.5 125 36.0
Manes.05G137300 Manihot esculenta HOM05D001188 ORTHO05D001032 1.1e-06 58.5 110 30.9
Psat1g080520 Pisum sativum HOM05D001188 ORTHO05D001032 1.1e-06 58.5 126 33.3
QL02p051463 Quercus lobata HOM05D001188 ORTHO05D001032 1.1e-06 58.5 133 36.1
HPP92_021857 Vanilla planifolia HOM05D001188 ORTHO05D001032 1.1e-06 58.5 90 41.1
Lalb_Chr02g0158221 Lupinus albus HOM05D001188 ORTHO05D001032 1.4e-06 58.2 129 31.8
arahy.Tifrunner.gnm1.ann1.34XY90 Arachis hypogaea HOM05D001188 ORTHO05D001032 1.8e-06 57.8 132 33.3
arahy.Tifrunner.gnm1.ann1.4VI3XS Arachis hypogaea HOM05D001188 ORTHO05D001032 1.8e-06 57.8 132 33.3
Gohir.D06G049000 Gossypium hirsutum HOM05D001188 ORTHO05D001032 1.8e-06 57.8 103 33.0
Gohir.D07G181000 Gossypium hirsutum HOM05D001188 ORTHO05D001032 1.8e-06 57.8 139 30.2
Gorai.010G055500 Gossypium raimondii HOM05D001188 ORTHO05D001032 1.8e-06 57.8 103 33.0
arahy.Tifrunner.gnm1.ann1.Z3Y2S3 Arachis hypogaea HOM05D001188 ORTHO05D001032 2.4e-06 57.4 132 30.3
Glyma.13G046100 Glycine max HOM05D001188 ORTHO05D001032 2.4e-06 57.4 132 34.1
Medtr6g018430 Medicago truncatula HOM05D001188 ORTHO05D001032 2.4e-06 57.4 132 36.4
Sopen03g038330 Solanum pennellii HOM05D001188 ORTHO05D001032 2.4e-06 57.4 136 32.4
SGA_v2.0_scaffold33G13493 Striga asiatica HOM05D001188 ORTHO05D001032 2.4e-06 57.4 118 35.6
Zm00001eb267620 Zea mays HOM05D001188 ORTHO05D015292 2.4e-06 57.4 80 35.0
AUR62035213 Chenopodium quinoa HOM05D001188 ORTHO05D001032 3.1e-06 57.0 145 29.7
VMungo0464G0317 Vigna mungo HOM05D001188 ORTHO05D001032 3.1e-06 57.0 134 34.3
Actinidia35089 Actinidia chinensis HOM05D001188 ORTHO05D001032 4.1e-06 56.6 136 31.6
Aqoxy3G03954 Aquilegia oxysepala HOM05D001188 ORTHO05D001032 4.1e-06 56.6 135 34.8
arahy.Tifrunner.gnm1.ann1.LU8TWQ Arachis hypogaea HOM05D001188 ORTHO05D001032 4.1e-06 56.6 132 30.3
Hund25061 Selenicereus undatus HOM05D001188 ORTHO05D001032 4.1e-06 56.6 143 33.6
Zm00001eb334130 Zea mays HOM05D001188 ORTHO05D001032 5.4e-06 56.2 117 30.8
Cc11_g10110 Coffea canephora HOM05D001188 ORTHO05D001032 7.0e-06 55.8 142 31.0
Gohir.A07G173283 Gossypium hirsutum HOM05D001188 ORTHO05D001032 7.0e-06 55.8 139 29.5
MBI10_g16030_MAGBIO Magnolia biondii HOM05D001188 ORTHO05D001032 7.0e-06 55.8 134 32.8
Peaxi162Scf00382g00824 Petunia axillaris HOM05D001188 ORTHO05D001032 7.0e-06 55.8 134 32.1
PGR044G0229 Punica granatum HOM05D001188 ORTHO05D001032 7.0e-06 55.8 131 32.8
Solyc03g119480.4 Solanum lycopersicum HOM05D001188 ORTHO05D001032 7.0e-06 55.8 136 32.4
SGA_v2.0_scaffold36G14537 Striga asiatica HOM05D001188 ORTHO05D001032 7.0e-06 55.8 131 30.5
TAR622G0754 Trochodendron aralioides HOM05D001188 ORTHO05D001032 7.0e-06 55.8 99 38.4
DCAR_011355 Daucus carota HOM05D001188 ORTHO05D001032 9.1e-06 55.5 125 32.8
Sed0026905 Sechium edule HOM05D001188 ORTHO05D001032 9.1e-06 55.5 133 30.8


User provided reference genes

Program Settings