Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10216 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 3.9e-193 677.9 340 100.0
Pp3c21_13310 Physcomitrium patens HOM05D000267 ORTHO05D009944 1.9e-86 323.6 306 55.9
SEGI_00421 Sequoiadendron giganteum HOM05D000267 ORTHO05D009944 8.2e-82 308.1 181 85.6
AagrBONN_evm.TU.Sc2ySwM_228.1198 Anthoceros agrestis HOM05D000267 ORTHO05D009944 3.3e-75 286.2 251 56.2
Mapoly0001s0154 Marchantia polymorpha HOM05D000267 ORTHO05D009944 9.1e-57 224.9 240 45.4
Cre13.g587500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 1.5e-56 224.2 250 44.8
Pp3c3_37260 Physcomitrium patens HOM05D000267 ORTHO05D009944 2.2e-55 220.3 244 45.5
Cre17.g719500 Chlamydomonas reinhardtii HOM05D000267 ORTHO05D009944 3.8e-55 219.5 301 42.2
SMO367G0708 Selaginella moellendorffii HOM05D000267 ORTHO05D009944 6.1e-53 212.2 221 46.6
AagrBONN_evm.TU.Sc2ySwM_344.2069 Anthoceros agrestis HOM05D000267 ORTHO05D009944 5.2e-52 209.1 246 43.5
COL.COLO4_17372 Corchorus olitorius HOM05D000267 ORTHO05D009944 2.5e-46 190.3 245 39.6
ATR0661G537 Amborella trichopoda HOM05D000267 ORTHO05D009944 4.2e-46 189.5 241 39.8
QL11p051524 Quercus lobata HOM05D000267 ORTHO05D009944 4.2e-46 189.5 233 39.9
FAN20G0365 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.0e-44 184.9 245 37.6
ClCG02G012080 Citrullus lanatus HOM05D000267 ORTHO05D009944 1.4e-44 184.5 246 39.0
Prupe.8G168300 Prunus persica HOM05D000267 ORTHO05D009944 1.8e-44 184.1 245 37.1
Thecc.02G056000 Theobroma cacao HOM05D000267 ORTHO05D009944 3.0e-44 183.3 245 37.1
Cpa.g.sc20.108 Carica papaya HOM05D000267 ORTHO05D009944 5.2e-44 182.6 245 38.0
CsaV3_2G016240 Cucumis sativus L. HOM05D000267 ORTHO05D009944 5.2e-44 182.6 246 38.2
FvH4_2g15600 Fragaria vesca HOM05D000267 ORTHO05D009944 2.6e-43 180.3 245 36.7
Gohir.D12G036200 Gossypium hirsutum HOM05D000267 ORTHO05D009944 3.4e-43 179.9 245 37.1
Gorai.008G037400 Gossypium raimondii HOM05D000267 ORTHO05D009944 3.4e-43 179.9 245 37.1
FAN27G0796 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.3e-42 177.9 245 36.3
Gohir.A12G036400 Gossypium hirsutum HOM05D000267 ORTHO05D009944 1.3e-42 177.9 245 36.7
TWI79G0018 Tripterygium wilfordii HOM05D000267 ORTHO05D009944 2.2e-42 177.2 278 33.5
Migut.B00061 Erythranthe guttata HOM05D000267 ORTHO05D009944 4.8e-42 176.0 233 36.5
CSS0022193 Camellia sinensis var. sinensis HOM05D000267 ORTHO05D009944 8.3e-42 175.3 238 37.8
Sed0004064 Sechium edule HOM05D000267 ORTHO05D009944 1.8e-41 174.1 246 37.8
MBI05_g00165_MAGBIO Magnolia biondii HOM05D000267 ORTHO05D009944 3.1e-41 173.3 249 38.6
Actinidia18043 Actinidia chinensis HOM05D000267 ORTHO05D002764 7.0e-41 172.2 225 38.7
TAR628G1652 Trochodendron aralioides HOM05D000267 ORTHO05D009944 7.0e-41 172.2 238 37.4
EL10Ac9g21344 Beta vulgaris HOM05D000267 ORTHO05D009944 1.6e-40 171.0 229 38.4
MD05G1124600 Malus domestica HOM05D000267 ORTHO05D009944 2.7e-40 170.2 244 34.8
Sc14g0002320 Simmondsia chinensis HOM05D000267 ORTHO05D009944 4.5e-40 169.5 240 34.6
Cfa005283 Carpinus fangiana HOM05D000267 ORTHO05D002764 5.9e-40 169.1 233 36.9
Atru.chr5.3400 Acer truncatum HOM05D000267 ORTHO05D009944 1.3e-39 167.9 234 36.8
Rhsim11G0193400 Rhododendron simsii HOM05D000267 ORTHO05D009944 1.3e-39 167.9 238 37.0
FAN15G3022 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.7e-39 167.5 242 36.4
AUR62015150 Chenopodium quinoa HOM05D000267 ORTHO05D009944 6.5e-39 165.6 227 37.0
CiPaw.05G084800 Carya illinoinensis HOM05D000267 ORTHO05D009944 1.1e-38 164.9 276 32.6
THA.LOC104807804 Tarenaya hassleriana HOM05D000267 ORTHO05D009944 1.5e-38 164.5 245 35.5
Potri.004G177400 Populus trichocarpa HOM05D000267 ORTHO05D009944 2.5e-38 163.7 235 35.3
MELO3C020832.2 Cucumis melo HOM05D000267 ORTHO05D009944 1.2e-37 161.4 246 35.4
vmacro02289 Vaccinium macrocarpon HOM05D000267 ORTHO05D009944 1.2e-37 161.4 238 34.9
AUR62010015 Chenopodium quinoa HOM05D000267 ORTHO05D009944 1.6e-37 161.0 227 36.1
Manes.11G097600 Manihot esculenta HOM05D000267 ORTHO05D009944 2.1e-37 160.6 238 35.3
AUR62013005 Chenopodium quinoa HOM05D000267 ORTHO05D009944 2.7e-37 160.2 229 35.4
Duzib132G0985 Durio zibethinus HOM05D000267 ORTHO05D009944 2.7e-37 160.2 247 35.6
Eucgr.I01454 Eucalyptus grandis HOM05D000267 ORTHO05D009944 4.7e-37 159.5 245 35.5
SalBow1G0833 Salvia bowleyana HOM05D000267 ORTHO05D009944 4.7e-37 159.5 231 35.1
Atru.chr5.3388 Acer truncatum HOM05D000267 ORTHO05D009944 6.1e-37 159.1 245 35.1
Os04g0560500 Oryza sativa ssp. japonica HOM05D000267 ORTHO05D009944 1.8e-36 157.5 244 34.4
Cc09_g10270 Coffea canephora HOM05D000267 ORTHO05D009944 3.0e-36 156.8 209 36.4
FAN24G1303 Fragaria x ananassa HOM05D000267 ORTHO05D009944 5.2e-36 156.0 232 34.9
MCO05G576 Micromonas commoda HOM05D000267 ORTHO05D009944 5.7e-35 152.5 224 41.1
Dinv41920 Davidia involucrata HOM05D000267 ORTHO05D002764 9.8e-35 151.8 201 36.3
Nitab4.5_0000079g0250 Nicotiana tabacum HOM05D000267 ORTHO05D000298 2.2e-34 150.6 235 34.5
MCO05G735 Micromonas commoda HOM05D000267 ORTHO05D009944 3.7e-34 149.8 268 33.6
Hund06449 Selenicereus undatus HOM05D000267 ORTHO05D009944 1.1e-33 148.3 209 37.3
GSVIVG01023990001 Vitis vinifera HOM05D000267 ORTHO05D009944 1.2e-32 144.8 239 33.1
CANSAT25G1222 Cannabis sativa HOM05D000267 ORTHO05D009944 1.6e-32 144.4 189 34.9
Zm00001eb074100 Zea mays HOM05D000267 ORTHO05D009944 4.5e-32 142.9 244 33.6
Hma1.2p1_0163F.1_g072670 Hydrangea macrophylla HOM05D000267 ORTHO05D009944 6.6e-31 139.0 177 35.6
Nitab4.5_0007484g0010 Nicotiana tabacum HOM05D000267 ORTHO05D009944 3.6e-29 133.3 235 31.9
RcHm_v2.0_Chr6g0278801 Rosa chinensis HOM05D000267 ORTHO05D009944 4.7e-29 132.9 189 35.4
Haze_02110 Corylus avellana HOM05D000267 ORTHO05D009944 3.0e-28 130.2 233 30.9
Ciclev10028457m.g Citrus clementina HOM05D000267 ORTHO05D009944 2.9e-26 123.6 150 36.0
PRCOL_00001600 Prasinoderma coloniale HOM05D000267 ORTHO05D009944 1.8e-25 120.9 254 33.9
Nn5g30837 Nelumbo nucifera HOM05D000267 ORTHO05D009944 1.0e-20 105.1 140 33.6
Atru.chr5.3392 Acer truncatum HOM05D000267 ORTHO05D009944 7.5e-19 99.0 247 27.1
RcHm_v2.0_Chr6g0255801 Rosa chinensis HOM05D000267 ORTHO05D009944 6.4e-18 95.9 148 30.4
Peaxi162Scf00078g01331 Petunia axillaris HOM05D000267 ORTHO05D009944 5.4e-17 92.8 118 42.4
Sabra04G0119300 Salix brachista HOM05D000267 ORTHO05D009944 5.4e-09 66.2 182 25.8
HPP92_001749 Vanilla planifolia HOM05D000267 ORTHO05D009944 1.6e-08 64.7 90 38.9
Ah.01g023200 Amaranthus hybridus HOM05D000267 ORTHO05D009944 3.5e-08 63.5 92 31.5
SEGI_27286 Sequoiadendron giganteum HOM05D007386 ORTHO05D009210 6.6e-07 59.3 39 76.9
Oeu015554.3 Olea europaea HOM05D000267 ORTHO05D002764 1.1e-06 58.5 84 31.0
SEGI_38844 Sequoiadendron giganteum HOM05D000103 ORTHO05D000049 5.6e-06 56.2 48 66.7


User provided reference genes

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