Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10108 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 2.2e-82 308.9 156 100.0
SEGI_23541 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 2.2e-29 132.9 158 53.2
SEGI_36735 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 4.8e-29 131.7 139 56.1
SEGI_14851 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 2.2e-26 122.9 139 53.2
SEGI_03464 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 1.1e-25 120.6 171 46.8
SEGI_09126 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 1.1e-25 120.6 139 51.8
SEGI_34313 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 1.4e-25 120.2 147 52.4
SEGI_07076 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 4.2e-25 118.6 143 53.8
SEGI_36812 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 1.8e-20 103.2 151 45.7
SEGI_19811 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 1.5e-19 100.1 151 46.4
SEGI_22000 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 7.2e-17 91.3 144 46.5
SEGI_17170 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 3.6e-16 89.0 137 46.0
SEGI_20974 Sequoiadendron giganteum HOM05D012184 ORTHO05D004077 5.3e-12 75.1 100 51.0
PGR004G2379 Punica granatum HOM05D001667 ORTHO05D001508 4.2e-09 65.5 135 37.0
TAR623G1308 Trochodendron aralioides HOM05D001667 ORTHO05D001508 9.4e-09 64.3 183 31.7
CDE04G1292 Ceratophyllum demersum HOM05D001667 ORTHO05D001508 1.6e-08 63.5 143 29.4
Nn6g34775 Nelumbo nucifera HOM05D001667 ORTHO05D001508 1.6e-08 63.5 128 35.2
TAR636G2183 Trochodendron aralioides HOM05D001667 ORTHO05D001508 3.6e-08 62.4 131 32.8
CDE12G0589 Ceratophyllum demersum HOM05D001667 ORTHO05D001508 4.7e-08 62.0 141 28.4
Aqoxy4G02696 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 8.0e-08 61.2 160 30.0
TAR633G2309 Trochodendron aralioides HOM05D001667 ORTHO05D001508 8.0e-08 61.2 153 28.8
Lj1E1035T0 Lonicera japonica HOM05D001667 ORTHO05D001508 2.3e-07 59.7 44 59.1
Aqoxy2G01020 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 4.0e-07 58.9 192 26.0
MBI01_g34424_MAGBIO Magnolia biondii HOM05D001667 ORTHO05D001508 8.8e-07 57.8 122 32.8
Psat0s2399g0040 Pisum sativum HOM05D003968 ORTHO05D004077 8.8e-07 57.8 109 34.9
CSS0046605 Camellia sinensis var. sinensis HOM05D001667 ORTHO05D001508 1.2e-06 57.4 42 64.3
Sc12g0004750 Simmondsia chinensis HOM05D001667 ORTHO05D001508 1.2e-06 57.4 42 59.5
THA.LOC104816609 Tarenaya hassleriana HOM05D001667 ORTHO05D001508 1.2e-06 57.4 60 43.3
Migut.L01911 Erythranthe guttata HOM05D001667 ORTHO05D001508 2.0e-06 56.6 40 57.5
Gohir.D04G095700 Gossypium hirsutum HOM05D001667 ORTHO05D001508 2.0e-06 56.6 56 46.4
Dinv21698 Davidia involucrata HOM05D001667 ORTHO05D001508 3.3e-06 55.8 46 50.0
Gorai.009G398500 Gossypium raimondii HOM05D001667 ORTHO05D001508 3.3e-06 55.8 56 46.4
unitig_22.g5670 Utricularia gibba HOM05D001667 ORTHO05D001508 3.3e-06 55.8 40 60.0
Gohir.A04G060300 Gossypium hirsutum HOM05D001667 ORTHO05D001508 4.4e-06 55.5 56 46.4
Hma1.2p1_1178F.1_g264380 Hydrangea macrophylla HOM05D001667 ORTHO05D001508 4.4e-06 55.5 58 44.8
Lalb_Chr01g0017921 Lupinus albus HOM05D001667 ORTHO05D001508 4.4e-06 55.5 46 52.2
AL3G23160 Arabidopsis lyrata HOM05D001667 ORTHO05D001508 5.7e-06 55.1 39 61.5
Haze_23335 Corylus avellana HOM05D001667 ORTHO05D001508 5.7e-06 55.1 39 66.7
Nitab4.5_0002706g0040 Nicotiana tabacum HOM05D001667 ORTHO05D001508 5.7e-06 55.1 38 63.2
Solyc06g073990.2 Solanum lycopersicum HOM05D001667 ORTHO05D001508 5.7e-06 55.1 39 59.0
MSTRG.18781 Avicennia marina HOM05D001667 ORTHO05D001508 7.5e-06 54.7 36 63.9
BNapus_Darmor_BZH_scaffold_145p00050 Brassica napus HOM05D001667 ORTHO05D001508 7.5e-06 54.7 67 43.3
BraA01t04173Z Brassica rapa HOM05D001667 ORTHO05D001508 7.5e-06 54.7 67 43.3
MD14G1034000 Malus domestica HOM05D001667 ORTHO05D001508 7.5e-06 54.7 56 48.2
SGA_v2.0_scaffold13G06675 Striga asiatica HOM05D001667 ORTHO05D001508 7.5e-06 54.7 42 54.8
unitig_27.g25121 Utricularia gibba HOM05D001667 ORTHO05D001508 7.5e-06 54.7 38 60.5
unitig_699.g19452 Utricularia gibba HOM05D001667 ORTHO05D001508 7.5e-06 54.7 38 60.5
Phvul.008G000400 Phaseolus vulgaris HOM05D003968 ORTHO05D004077 9.7e-06 54.3 108 36.1
Potri.003G165800 Populus trichocarpa HOM05D003968 ORTHO05D004077 9.7e-06 54.3 107 32.7
Sed0007684 Sechium edule HOM05D001667 ORTHO05D001508 9.7e-06 54.3 42 57.1


User provided reference genes

Program Settings