Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 1.5e-33 145.6 72 100.0
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 2.1e-19 98.6 71 63.4
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 2.1e-19 98.6 71 63.4
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 2.7e-19 98.2 65 70.8
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 2.7e-19 98.2 71 63.4
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 3.5e-19 97.8 71 63.4
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 4.6e-19 97.4 70 62.9
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 6.1e-19 97.1 71 62.0
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 7.9e-19 96.7 70 65.7
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 1.0e-18 96.3 64 67.2
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 1.0e-18 96.3 70 62.9
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-18 96.3 70 62.9
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-18 96.3 70 62.9
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.0e-18 96.3 70 62.9
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.0e-18 96.3 70 61.4
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 1.8e-18 95.5 71 60.6
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.8e-18 95.5 61 72.1
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 2.3e-18 95.1 69 62.3
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 2.3e-18 95.1 72 62.5
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 2.3e-18 95.1 70 61.4
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.3e-18 95.1 65 66.2
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 3.9e-18 94.4 71 59.2
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 3.9e-18 94.4 70 58.6
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 3.9e-18 94.4 70 58.6
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 5.1e-18 94.0 71 60.6
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 5.1e-18 94.0 72 58.3
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 5.1e-18 94.0 64 67.2
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 5.1e-18 94.0 65 67.7
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 5.1e-18 94.0 70 61.4
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 5.1e-18 94.0 70 62.9
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 5.1e-18 94.0 64 65.6
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 6.7e-18 93.6 65 66.2
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 6.7e-18 93.6 70 62.9
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 8.7e-18 93.2 69 63.8
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 8.7e-18 93.2 70 61.4
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 8.7e-18 93.2 70 61.4
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 8.7e-18 93.2 64 65.6
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 8.7e-18 93.2 64 68.8
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 1.1e-17 92.8 70 61.4
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 1.1e-17 92.8 65 67.7
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 1.5e-17 92.4 61 67.2
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.5e-17 92.4 65 66.2
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.9e-17 92.0 65 64.6
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.9e-17 92.0 65 64.6
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.9e-17 92.0 64 65.6
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.9e-17 92.0 64 67.2
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 2.5e-17 91.7 71 60.6
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 2.5e-17 91.7 72 61.1
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 3.3e-17 91.3 70 61.4
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 4.3e-17 90.9 65 63.1
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 4.3e-17 90.9 70 58.6
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 4.3e-17 90.9 69 60.9
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 4.3e-17 90.9 69 63.8
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 5.7e-17 90.5 61 65.6
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 7.4e-17 90.1 61 70.5
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 7.4e-17 90.1 70 60.0
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 7.4e-17 90.1 62 69.4
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 7.4e-17 90.1 62 69.4
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 7.4e-17 90.1 62 66.1
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 7.4e-17 90.1 65 66.2
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 9.7e-17 89.7 65 63.1
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 9.7e-17 89.7 65 66.2
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 9.7e-17 89.7 65 66.2
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 9.7e-17 89.7 64 65.6
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 1.3e-16 89.4 75 61.3
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 1.6e-16 89.0 69 59.4
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 2.2e-16 88.6 70 60.0
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.8e-16 88.2 70 57.1
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 2.8e-16 88.2 62 64.5
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 3.7e-16 87.8 61 67.2
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 3.7e-16 87.8 64 65.6
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 4.8e-16 87.4 64 64.1
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 6.3e-16 87.0 65 63.1
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 8.2e-16 86.7 70 55.7
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 1.4e-15 85.9 64 64.1
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 4.1e-15 84.3 72 59.7
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 4.1e-15 84.3 68 63.2
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 6.9e-15 83.6 63 65.1
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 6.9e-15 83.6 69 56.5
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 6.9e-15 83.6 61 63.9
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 1.7e-13 79.0 61 62.3
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 5.0e-13 77.4 82 51.2
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 6.5e-13 77.0 78 52.6
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 6.5e-13 77.0 65 60.0
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 7.9e-11 70.1 50 64.0
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 1.8e-10 68.9 61 57.4
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 2.3e-10 68.6 94 42.6
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 3.9e-10 67.8 45 68.9
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.1e-09 66.2 49 63.3
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 2.5e-09 65.1 72 48.6
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 7.4e-09 63.5 71 47.9
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.3e-08 62.8 134 31.3
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 2.2e-08 62.0 70 47.1
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 4.8e-08 60.8 120 35.0
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 5.3e-07 57.4 71 46.5
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 2.0e-06 55.5 64 43.8
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 3.4e-06 54.7 49 55.1


User provided reference genes

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