Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 1.1e-41 172.9 95 100.0
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 1.7e-21 105.9 72 80.6
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 1.1e-20 103.2 72 65.3
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 1.1e-20 103.2 72 65.3
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 1.9e-20 102.4 72 80.6
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 1.9e-20 102.4 72 63.9
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 2.5e-20 102.1 72 76.4
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 3.2e-20 101.7 72 62.5
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 4.2e-20 101.3 67 85.1
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 4.2e-20 101.3 72 62.5
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 5.5e-20 100.9 69 66.7
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 7.2e-20 100.5 72 65.3
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 7.2e-20 100.5 72 79.2
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 9.4e-20 100.1 81 71.6
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 1.2e-19 99.8 81 70.4
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 1.2e-19 99.8 81 70.4
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 1.2e-19 99.8 72 77.8
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 1.2e-19 99.8 70 64.3
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 1.6e-19 99.4 72 61.1
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 1.6e-19 99.4 72 62.5
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 2.1e-19 99.0 67 82.1
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 2.1e-19 99.0 72 75.0
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 2.1e-19 99.0 72 77.8
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 2.1e-19 99.0 72 63.9
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 2.7e-19 98.6 81 56.8
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 2.7e-19 98.6 81 56.8
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 2.7e-19 98.6 81 56.8
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 3.6e-19 98.2 81 66.7
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 3.6e-19 98.2 65 84.6
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 4.7e-19 97.8 70 80.0
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 4.7e-19 97.8 81 55.6
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 8.0e-19 97.1 66 65.2
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 8.0e-19 97.1 67 64.2
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 8.0e-19 97.1 70 61.4
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 1.0e-18 96.7 72 59.7
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 1.0e-18 96.7 67 62.7
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 1.8e-18 95.9 72 75.0
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.3e-18 95.5 73 60.3
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 2.3e-18 95.5 65 83.1
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 3.0e-18 95.1 73 60.3
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 4.0e-18 94.7 69 62.3
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 4.0e-18 94.7 70 71.4
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 4.0e-18 94.7 68 77.9
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 5.2e-18 94.4 67 68.7
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 5.2e-18 94.4 71 77.5
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 5.2e-18 94.4 71 77.5
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 6.8e-18 94.0 72 58.3
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 6.8e-18 94.0 70 71.4
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 8.8e-18 93.6 65 63.1
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 8.8e-18 93.6 70 58.6
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 1.2e-17 93.2 67 64.2
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 1.2e-17 93.2 70 61.4
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 2.0e-17 92.4 67 64.2
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 2.0e-17 92.4 67 64.2
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 2.0e-17 92.4 67 64.2
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 2.0e-17 92.4 67 64.2
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 2.0e-17 92.4 67 64.2
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.0e-17 92.4 68 60.3
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 2.6e-17 92.0 67 77.6
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 2.6e-17 92.0 73 63.0
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 2.6e-17 92.0 72 69.4
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 3.4e-17 91.7 67 62.7
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 3.4e-17 91.7 69 58.0
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 4.4e-17 91.3 68 60.3
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 7.5e-17 90.5 62 83.9
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 9.8e-17 90.1 76 55.3
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 9.8e-17 90.1 76 55.3
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 9.8e-17 90.1 75 56.0
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 9.8e-17 90.1 82 53.7
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 9.8e-17 90.1 69 58.0
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 9.8e-17 90.1 72 59.7
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 9.8e-17 90.1 85 55.3
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 2.2e-16 89.0 66 62.1
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 2.8e-16 88.6 72 58.3
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 2.8e-16 88.6 72 58.3
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 6.3e-16 87.4 66 60.6
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 6.3e-16 87.4 66 71.2
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 1.4e-15 86.3 59 84.7
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 4.1e-15 84.7 74 58.1
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 5.4e-15 84.3 67 56.7
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 9.1e-15 83.6 103 44.7
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 1.2e-14 83.2 61 60.7
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 2.0e-14 82.4 64 56.2
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 1.9e-12 75.9 67 52.2
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 4.7e-11 71.2 59 69.5
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 4.7e-11 71.2 35 85.7
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 1.8e-10 69.3 38 76.3
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 2.3e-10 68.9 66 48.5
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 2.3e-10 68.9 75 46.7
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 5.2e-10 67.8 32 84.4
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 5.2e-10 67.8 38 68.4
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 6.8e-10 67.4 47 63.8
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 6.8e-10 67.4 47 63.8
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 6.8e-10 67.4 47 63.8
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 1.2e-09 66.6 32 81.2
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 2.0e-09 65.9 38 65.8
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 1.3e-08 63.2 38 65.8
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 1.1e-07 60.1 59 61.0
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 1.8e-07 59.3 33 69.7
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 2.4e-07 58.9 64 45.3
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 4.1e-07 58.2 35 62.9
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 5.4e-07 57.8 55 45.5
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 7.0e-07 57.4 33 63.6
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 9.2e-07 57.0 52 46.2
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 1.2e-06 56.6 51 51.0


User provided reference genes

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