Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09974 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 1.1e-152 543.1 259 100.0
FAN15G3120 Fragaria x ananassa HOM05D006313 ORTHO05D007853 2.3e-84 316.2 268 58.2
FvH4_2g37320 Fragaria vesca HOM05D006313 ORTHO05D007853 8.7e-84 314.3 268 57.8
FAN27G1942 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.1e-83 313.9 268 57.8
Nn5g30955 Nelumbo nucifera HOM05D006313 ORTHO05D007853 1.1e-83 313.9 266 59.4
GSVIVG01013365001 Vitis vinifera HOM05D006313 ORTHO05D007853 1.5e-83 313.5 244 60.7
FAN20G0447 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.9e-83 313.2 268 57.8
RcHm_v2.0_Chr6g0304381 Rosa chinensis HOM05D006313 ORTHO05D007853 3.3e-83 312.4 263 58.6
Solyc04g082420.3 Solanum lycopersicum HOM05D006313 ORTHO05D007853 3.3e-83 312.4 280 53.9
Sopen04g036010 Solanum pennellii HOM05D006313 ORTHO05D007853 3.3e-83 312.4 280 53.9
Atru.chr13.141 Acer truncatum HOM05D006313 ORTHO05D007853 5.6e-83 311.6 263 57.4
Nitab4.5_0000588g0050 Nicotiana tabacum HOM05D006313 ORTHO05D007853 5.6e-83 311.6 263 56.7
PGSC0003DMG400009982 Solanum tuberosum HOM05D006313 ORTHO05D007853 7.3e-83 311.2 280 53.6
Hma1.2p1_0507F.1_g168580 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 1.6e-82 310.1 265 58.9
Rhsim07G0255100 Rhododendron simsii HOM05D006313 ORTHO05D007853 1.6e-82 310.1 265 57.4
Gorai.009G187700 Gossypium raimondii HOM05D006313 ORTHO05D007853 2.1e-82 309.7 263 57.8
Peaxi162Scf00711g00530 Petunia axillaris HOM05D006313 ORTHO05D007853 2.1e-82 309.7 280 53.2
vmacro04407 Vaccinium macrocarpon HOM05D006313 ORTHO05D007853 2.1e-82 309.7 282 53.5
CAN.G311.119 Capsicum annuum HOM05D006313 ORTHO05D007853 4.8e-82 308.5 280 53.6
ECA232G0012 Erigeron canadensis HOM05D006313 ORTHO05D007853 4.8e-82 308.5 280 52.9
ATR0661G251 Amborella trichopoda HOM05D006313 ORTHO05D007853 6.2e-82 308.1 260 57.7
Gohir.D05G182400 Gossypium hirsutum HOM05D006313 ORTHO05D007853 8.1e-82 307.8 263 56.7
TAR381G0755 Trochodendron aralioides HOM05D006313 ORTHO05D007853 1.1e-81 307.4 262 57.3
CiPaw.07G138200 Carya illinoinensis HOM05D006313 ORTHO05D007853 1.4e-81 307.0 261 58.2
Gohir.A05G179200 Gossypium hirsutum HOM05D006313 ORTHO05D007853 1.4e-81 307.0 263 56.7
Actinidia37918 Actinidia chinensis HOM05D006313 ORTHO05D007853 3.1e-81 305.8 267 56.6
Aqoxy5G01036 Aquilegia oxysepala HOM05D006313 ORTHO05D007853 3.1e-81 305.8 265 55.8
Haze_22787 Corylus avellana HOM05D006313 ORTHO05D007853 3.1e-81 305.8 262 57.6
Dinv31948 Davidia involucrata HOM05D006313 ORTHO05D007853 4.0e-81 305.4 279 54.8
COL.COLO4_05223 Corchorus olitorius HOM05D006313 ORTHO05D007853 5.3e-81 305.1 266 56.0
Ciclev10003249m.g Citrus clementina HOM05D006313 ORTHO05D007853 6.9e-81 304.7 266 56.0
CSS0043965 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 9.0e-81 304.3 282 52.8
PSO210G6994 Papaver somniferum HOM05D006313 ORTHO05D007853 1.2e-80 303.9 267 55.4
Cfa014086 Carpinus fangiana HOM05D006313 ORTHO05D007853 1.5e-80 303.5 262 57.3
HanXRQChr15g0492461 Helianthus annuus HOM05D006313 ORTHO05D007853 1.5e-80 303.5 273 52.7
PSO170G0983 Papaver somniferum HOM05D006313 ORTHO05D007853 1.5e-80 303.5 267 55.4
CANSAT25G3184 Cannabis sativa HOM05D006313 ORTHO05D007853 2.0e-80 303.1 288 54.9
Thecc.08G059800 Theobroma cacao HOM05D006313 ORTHO05D007853 2.6e-80 302.8 265 55.5
Lsat_1_v5_gn_9_45201 Lactuca sativa HOM05D006313 ORTHO05D007853 4.5e-80 302.0 283 52.7
TWI12G0830 Tripterygium wilfordii HOM05D006313 ORTHO05D007853 7.6e-80 301.2 262 56.5
Manes.18G004800 Manihot esculenta HOM05D006313 ORTHO05D007853 9.9e-80 300.8 279 53.8
Potri.002G010100 Populus trichocarpa HOM05D006313 ORTHO05D007853 9.9e-80 300.8 267 54.7
Lj4A10G75 Lonicera japonica HOM05D006313 ORTHO05D007853 1.3e-79 300.4 283 55.8
MD08G1002100 Malus domestica HOM05D006313 ORTHO05D007853 1.7e-79 300.1 261 56.7
PGR083G2847 Punica granatum HOM05D006313 ORTHO05D007853 1.7e-79 300.1 273 53.8
CDE04G1532 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 2.2e-79 299.7 261 56.7
Potri.005G251300 Populus trichocarpa HOM05D006313 ORTHO05D007853 2.2e-79 299.7 262 56.1
Prupe.1G353800 Prunus persica HOM05D006313 ORTHO05D007853 4.9e-79 298.5 261 57.1
Sabra02G0007500 Salix brachista HOM05D006313 ORTHO05D007853 4.9e-79 298.5 265 55.5
Cc10_g00630 Coffea canephora HOM05D006313 ORTHO05D007853 8.4e-79 297.7 266 55.3
MBI08_g24269_MAGBIO Magnolia biondii HOM05D006313 ORTHO05D007853 8.4e-79 297.7 262 56.5
SGA_v2.0_scaffold54G19673 Striga asiatica HOM05D006313 ORTHO05D007853 1.1e-78 297.4 260 56.9
EL10Ac1g01951 Beta vulgaris HOM05D006313 ORTHO05D007853 1.4e-78 297.0 262 56.1
CDE02G1829 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 5.4e-78 295.0 261 55.6
Os05g0345500 Oryza sativa ssp. japonica HOM05D006313 ORTHO05D007853 9.3e-78 294.3 280 51.4
QL02p014292 Quercus lobata HOM05D006313 ORTHO05D007853 9.3e-78 294.3 260 55.0
Migut.N02954 Erythranthe guttata HOM05D006313 ORTHO05D007853 1.2e-77 293.9 282 52.8
SHI07994 Sapria himalayana HOM05D006313 ORTHO05D007853 1.2e-77 293.9 259 55.2
Eucgr.F01772 Eucalyptus grandis HOM05D006313 ORTHO05D007853 2.1e-77 293.1 263 55.9
arahy.Tifrunner.gnm1.ann1.N9IWSS Arachis hypogaea HOM05D006313 ORTHO05D007853 3.5e-77 292.4 268 54.1
arahy.Tifrunner.gnm1.ann1.TM2XQH Arachis hypogaea HOM05D006313 ORTHO05D007853 3.5e-77 292.4 268 54.1
Lj5g0009044 Lotus japonicus HOM05D006313 ORTHO05D007853 3.5e-77 292.4 242 55.8
Sabra05G0194600 Salix brachista HOM05D006313 ORTHO05D007853 6.0e-77 291.6 259 55.2
Oeu000694.1 Olea europaea HOM05D006313 ORTHO05D007853 1.0e-76 290.8 267 55.1
AUR62040798 Chenopodium quinoa HOM05D006313 ORTHO05D007853 1.8e-76 290.0 255 55.3
Hund05111 Selenicereus undatus HOM05D006313 ORTHO05D007853 1.8e-76 290.0 264 52.7
CsaV3_4G037230 Cucumis sativus L. HOM05D006313 ORTHO05D007853 5.1e-76 288.5 277 52.0
Medtr5g066730 Medicago truncatula HOM05D006313 ORTHO05D007853 6.7e-76 288.1 256 53.5
Thhalv10016264m.g Eutrema salsugineum HOM05D006313 ORTHO05D007853 1.5e-75 287.0 264 54.2
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 2.5e-75 286.2 277 52.0
THA.LOC104825426 Tarenaya hassleriana HOM05D006313 ORTHO05D007853 3.3e-75 285.8 262 53.8
A04p23350 Brassica napus HOM05D006313 ORTHO05D007853 5.6e-75 285.0 262 53.8
BraA04t17863Z Brassica rapa HOM05D006313 ORTHO05D007853 5.6e-75 285.0 262 53.8
C04p59650 Brassica napus HOM05D006313 ORTHO05D007853 2.1e-74 283.1 257 55.3
BolC4t27473H Brassica oleracea HOM05D006313 ORTHO05D007853 2.1e-74 283.1 257 55.3
BcaB06g28382 Brassica carinata HOM05D006313 ORTHO05D007853 2.8e-74 282.7 258 55.0
Psat2g064920 Pisum sativum HOM05D006313 ORTHO05D007853 3.7e-74 282.3 257 51.8
Sed0015221 Sechium edule HOM05D006313 ORTHO05D007853 4.8e-74 282.0 276 51.4
CARHR124070 Cardamine hirsuta HOM05D006313 ORTHO05D007853 8.1e-74 281.2 256 54.7
Ca_25243_v3 Cicer arietinum L. HOM05D006313 ORTHO05D007853 8.1e-74 281.2 253 53.8
DCAR_013918 Daucus carota HOM05D006313 ORTHO05D007853 8.1e-74 281.2 259 52.5
HPP92_022696 Vanilla planifolia HOM05D006313 ORTHO05D007853 8.1e-74 281.2 278 51.1
AagrBONN_evm.TU.Sc2ySwM_228.121 Anthoceros agrestis HOM05D006313 ORTHO05D007853 1.1e-73 280.8 242 57.4
AL4G25490 Arabidopsis lyrata HOM05D006313 ORTHO05D007853 1.1e-73 280.8 270 53.0
Sp4g13150 Schrenkiella parvula HOM05D006313 ORTHO05D007853 1.1e-73 280.8 269 53.9
VMungo0647G1480 Vigna mungo HOM05D006313 ORTHO05D007853 1.4e-73 280.4 259 53.3
AT2G30600 Arabidopsis thaliana HOM05D006313 ORTHO05D007853 2.4e-73 279.6 270 52.6
TPR.G38702 Trifolium pratense HOM05D006313 ORTHO05D007853 3.1e-73 279.3 258 51.2
Phvul.001G001100 Phaseolus vulgaris HOM05D006313 ORTHO05D007853 4.0e-73 278.9 259 52.9
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 5.3e-73 278.5 265 52.1
Carub.0004s1176 Capsella rubella HOM05D006313 ORTHO05D007853 2.6e-72 276.2 274 52.2
Glyma.14G223400 Glycine max HOM05D006313 ORTHO05D007853 5.8e-72 275.0 260 53.5
Sc02g0009120 Simmondsia chinensis HOM05D006313 ORTHO05D007853 1.3e-71 273.9 267 51.7
Cpa.g.sc26.189 Carica papaya HOM05D006313 ORTHO05D007853 3.8e-71 272.3 250 56.0
Lalb_Chr01g0008341 Lupinus albus HOM05D006313 ORTHO05D007853 8.4e-71 271.2 256 50.8
Duzib093G1521 Durio zibethinus HOM05D006313 ORTHO05D007853 1.4e-70 270.4 215 57.2
Pp3c3_5520 Physcomitrium patens HOM05D006313 ORTHO05D007853 6.7e-68 261.5 250 53.6
SMO361G0777 Selaginella moellendorffii HOM05D006313 ORTHO05D007853 5.5e-62 241.9 245 50.6
SEGI_38873 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 6.5e-55 218.4 247 50.6
CBR_g18852 Chara braunii HOM05D006313 ORTHO05D007853 4.8e-50 202.2 286 39.9
Cre03.g158850 Chlamydomonas reinhardtii HOM05D006313 ORTHO05D007853 8.8e-28 128.3 185 38.4
unitig_22.g5882 Utricularia gibba HOM05D006313 ORTHO05D007853 5.3e-25 119.0 87 55.2
PRCOL_00004404 Prasinoderma coloniale HOM05D006313 ORTHO05D007853 4.7e-21 105.9 211 29.9
unitig_22.g5883 Utricularia gibba HOM05D006313 ORTHO05D007853 1.8e-09 67.4 78 46.2
Hma1.2p1_0507F.1_g168570 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 6.6e-07 58.9 62 54.8


User provided reference genes

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