Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09940 Sequoiadendron giganteum HOM05D005274 ORTHO05D006485 9.8e-101 370.2 191 100.0
ECA238G2078 Erigeron canadensis HOM05D005274 ORTHO05D006485 1.3e-12 77.4 103 42.7
Oeu020806.2 Olea europaea HOM05D005274 ORTHO05D006485 1.3e-12 77.4 108 41.7
Cpa.g.sc70.54 Carica papaya HOM05D005274 ORTHO05D006485 2.2e-12 76.6 124 40.3
vmacro18391 Vaccinium macrocarpon HOM05D005274 ORTHO05D006485 1.5e-11 73.9 119 35.3
TAR624G0372 Trochodendron aralioides HOM05D005274 ORTHO05D006485 2.5e-11 73.2 123 35.8
FAN24G2993 Fragaria x ananassa HOM05D005274 ORTHO05D006485 4.2e-11 72.4 102 40.2
Sopen10g034190 Solanum pennellii HOM05D005274 ORTHO05D006485 4.2e-11 72.4 109 37.6
Nn8g41301 Nelumbo nucifera HOM05D005274 ORTHO05D006485 5.5e-11 72.0 104 40.4
Hma1.2p1_0474F.1_g160740 Hydrangea macrophylla HOM05D005274 ORTHO05D006485 7.2e-11 71.6 120 36.7
Oeu034171.3 Olea europaea HOM05D005274 ORTHO05D006485 9.4e-11 71.2 108 39.8
CSS0033174 Camellia sinensis var. sinensis HOM05D005274 ORTHO05D006485 1.2e-10 70.9 102 46.1
FAN27G1266 Fragaria x ananassa HOM05D005274 ORTHO05D006485 1.6e-10 70.5 101 39.6
Rhsim08G0038500 Rhododendron simsii HOM05D005274 ORTHO05D006485 1.6e-10 70.5 102 41.2
FvH4_2g10500 Fragaria vesca HOM05D005274 ORTHO05D006485 2.1e-10 70.1 102 39.2
FAN15G2064 Fragaria x ananassa HOM05D005274 ORTHO05D006485 2.7e-10 69.7 101 39.6
Sabra04G0133600 Salix brachista HOM05D005274 ORTHO05D006485 2.7e-10 69.7 108 42.6
GSVIVG01032972001 Vitis vinifera HOM05D005274 ORTHO05D006485 2.7e-10 69.7 104 37.5
VMungo1309G1271 Vigna mungo HOM05D005274 ORTHO05D006485 3.6e-10 69.3 129 37.2
Medtr5g071380 Medicago truncatula HOM05D005274 ORTHO05D006485 4.7e-10 68.9 126 33.3
Medtr2g097630 Medicago truncatula HOM05D005274 ORTHO05D006485 6.1e-10 68.6 126 33.3
CAN.G792.79 Capsicum annuum HOM05D005274 ORTHO05D006485 8.0e-10 68.2 121 33.9
ATR1136G175 Amborella trichopoda HOM05D005274 ORTHO05D006485 1.0e-09 67.8 102 39.2
CSS0005176 Camellia sinensis var. sinensis HOM05D005274 ORTHO05D006485 1.0e-09 67.8 111 37.8
Nn8g40353 Nelumbo nucifera HOM05D005274 ORTHO05D006485 1.4e-09 67.4 102 38.2
THA.LOC104802536 Tarenaya hassleriana HOM05D005274 ORTHO05D006485 1.4e-09 67.4 123 38.2
Psat2g056880 Pisum sativum HOM05D005274 ORTHO05D006485 1.8e-09 67.0 128 32.8
Dinv33272 Davidia involucrata HOM05D005274 ORTHO05D006485 2.3e-09 66.6 106 37.7
TAR381G1230 Trochodendron aralioides HOM05D005274 ORTHO05D006485 2.3e-09 66.6 108 41.7
SGA_v2.0_scaffold32G13165 Striga asiatica HOM05D005274 ORTHO05D006485 3.0e-09 66.2 102 37.3
RcHm_v2.0_Chr6g0267991 Rosa chinensis HOM05D005274 ORTHO05D006485 5.2e-09 65.5 102 37.3
Lsat_1_v5_gn_2_86720 Lactuca sativa HOM05D005274 ORTHO05D006485 6.8e-09 65.1 119 37.0
Lalb_Chr10g0096401 Lupinus albus HOM05D005274 ORTHO05D006485 6.8e-09 65.1 126 34.1
PGSC0003DMG400005779 Solanum tuberosum HOM05D005274 ORTHO05D006485 6.8e-09 65.1 104 35.6
Thecc.04G049000 Theobroma cacao HOM05D005274 ORTHO05D006485 6.8e-09 65.1 125 34.4
MSTRG.20092 Avicennia marina HOM05D005274 ORTHO05D006485 8.8e-09 64.7 102 35.3
Cfa007146 Carpinus fangiana HOM05D005274 ORTHO05D006485 8.8e-09 64.7 118 37.3
CiPaw.04G000800 Carya illinoinensis HOM05D005274 ORTHO05D006485 8.8e-09 64.7 107 38.3
Duzib187G0989 Durio zibethinus HOM05D005274 ORTHO05D006485 8.8e-09 64.7 107 37.4
Gohir.D11G068400 Gossypium hirsutum HOM05D005274 ORTHO05D006485 8.8e-09 64.7 122 33.6
Potri.004G197200 Populus trichocarpa HOM05D005274 ORTHO05D006485 8.8e-09 64.7 103 39.8
PGSC0003DMG400011003 Solanum tuberosum HOM05D005274 ORTHO05D006485 8.8e-09 64.7 122 32.8
TPR.G27812 Trifolium pratense HOM05D005274 ORTHO05D006485 8.8e-09 64.7 131 31.3
Gorai.007G073200 Gossypium raimondii HOM05D005274 ORTHO05D006485 1.5e-08 63.9 122 33.6
MD09G1264600 Malus domestica HOM05D005274 ORTHO05D006485 1.5e-08 63.9 108 37.0
Manes.11G112500 Manihot esculenta HOM05D005274 ORTHO05D006485 1.5e-08 63.9 99 36.4
Nitab4.5_0004836g0020 Nicotiana tabacum HOM05D005274 ORTHO05D006485 1.5e-08 63.9 122 33.6
Glyma.14G044800 Glycine max HOM05D005274 ORTHO05D006485 2.0e-08 63.5 125 32.0
Atru.chr6.2707 Acer truncatum HOM05D005274 ORTHO05D006485 2.6e-08 63.2 104 36.5
HanXRQChr07g0200241 Helianthus annuus HOM05D005274 ORTHO05D006485 2.6e-08 63.2 125 34.4
LjContig00564g0024425 Lotus japonicus HOM05D005274 ORTHO05D006485 2.6e-08 63.2 127 32.3
Glyma.02G271800 Glycine max HOM05D005274 ORTHO05D006485 3.4e-08 62.8 129 31.8
Peaxi162Scf00102g01534 Petunia axillaris HOM05D005274 ORTHO05D006485 3.4e-08 62.8 125 31.2
Ca_26258_v3 Cicer arietinum L. HOM05D005274 ORTHO05D006485 4.4e-08 62.4 131 30.5
Cc00_g24660 Coffea canephora HOM05D005274 ORTHO05D006485 7.5e-08 61.6 122 33.6
QL02p069234 Quercus lobata HOM05D005274 ORTHO05D006485 7.5e-08 61.6 122 32.0
Cc06_g13990 Coffea canephora HOM05D005274 ORTHO05D006485 9.8e-08 61.2 122 33.6
Ciclev10016162m.g Citrus clementina HOM05D005274 ORTHO05D006485 1.7e-07 60.5 104 34.6
Solyc08g008040.3 Solanum lycopersicum HOM05D005274 ORTHO05D006485 2.2e-07 60.1 102 33.3
Lj9A368G50 Lonicera japonica HOM05D005274 ORTHO05D006485 3.7e-07 59.3 123 31.7
Aa31LG10G6820 Aethionema arabicum HOM05D005274 ORTHO05D006485 4.8e-07 58.9 102 38.2
Nitab4.5_0006090g0030 Nicotiana tabacum HOM05D005274 ORTHO05D006485 4.8e-07 58.9 120 30.8
arahy.Tifrunner.gnm1.ann1.5GP605 Arachis hypogaea HOM05D005274 ORTHO05D006485 6.3e-07 58.5 122 31.1
Eucgr.I01592 Eucalyptus grandis HOM05D005274 ORTHO05D006485 6.3e-07 58.5 104 36.5
PGR142G3427 Punica granatum HOM05D005274 ORTHO05D006485 8.3e-07 58.2 104 38.5
arahy.Tifrunner.gnm1.ann1.T7P6Q4 Arachis hypogaea HOM05D005274 ORTHO05D006485 1.4e-06 57.4 122 30.3
Phvul.005G158400 Phaseolus vulgaris HOM05D005274 ORTHO05D006485 1.8e-06 57.0 122 34.4
Sopen08g003920 Solanum pennellii HOM05D005274 ORTHO05D006485 1.8e-06 57.0 100 32.0
Migut.B00249 Erythranthe guttata HOM05D005274 ORTHO05D006485 2.4e-06 56.6 122 29.5
AagrBONN_evm.TU.Sc2ySwM_228.2974 Anthoceros agrestis HOM05D005274 ORTHO05D006485 4.1e-06 55.8 103 34.0
Gohir.A11G064100 Gossypium hirsutum HOM05D005274 ORTHO05D006485 7.0e-06 55.1 118 30.5
Nitab4.5_0000568g0280 Nicotiana tabacum HOM05D005274 ORTHO05D006485 7.0e-06 55.1 110 33.6
Prupe.5G024800 Prunus persica HOM05D005274 ORTHO05D006485 7.0e-06 55.1 108 35.2
MELO3C005096.2 Cucumis melo HOM05D005274 ORTHO05D006485 9.1e-06 54.7 105 32.4
CsaV3_5G024970 Cucumis sativus L. HOM05D005274 ORTHO05D006485 9.1e-06 54.7 102 32.4
DCAR_022112 Daucus carota HOM05D005274 ORTHO05D006485 9.1e-06 54.7 107 33.6


User provided reference genes

Program Settings