Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09910 Sequoiadendron giganteum HOM05D001756 ORTHO05D001581 8.6e-51 203.4 103 100.0
BcaC09g49971 Brassica carinata HOM05D001756 ORTHO05D001581 2.6e-07 58.9 83 47.0
C01p30590 Brassica napus HOM05D001756 ORTHO05D001581 2.6e-07 58.9 83 47.0
BolC1t02995H Brassica oleracea HOM05D001756 ORTHO05D001581 2.6e-07 58.9 83 47.0
Cfa004702 Carpinus fangiana HOM05D001756 ORTHO05D001581 2.6e-07 58.9 93 43.0
A01p24530 Brassica napus HOM05D001756 ORTHO05D001581 3.4e-07 58.5 83 45.8
BraA01t02363Z Brassica rapa HOM05D001756 ORTHO05D001581 3.4e-07 58.5 83 45.8
FvH4_2g32750 Fragaria vesca HOM05D001756 ORTHO05D001581 4.5e-07 58.2 94 37.2
FAN24G1728 Fragaria x ananassa HOM05D001756 ORTHO05D001581 4.5e-07 58.2 94 37.2
Cfa013750 Carpinus fangiana HOM05D001756 ORTHO05D001581 5.8e-07 57.8 91 47.3
Hund13962 Selenicereus undatus HOM05D001756 ORTHO05D001581 5.8e-07 57.8 51 54.9
BcaC07g39442 Brassica carinata HOM05D001756 ORTHO05D001581 7.6e-07 57.4 83 45.8
C08p24800 Brassica napus HOM05D001756 ORTHO05D001581 7.6e-07 57.4 83 45.8
MD10G1110000 Malus domestica HOM05D001756 ORTHO05D001581 7.6e-07 57.4 90 41.1
Haze_10304 Corylus avellana HOM05D001756 ORTHO05D001581 9.9e-07 57.0 94 40.4
Thhalv10010875m.g Eutrema salsugineum HOM05D001756 ORTHO05D001581 9.9e-07 57.0 90 40.0
Gohir.A12G078300 Gossypium hirsutum HOM05D001756 ORTHO05D001581 9.9e-07 57.0 87 47.1
BcaB01g00674 Brassica carinata HOM05D001756 ORTHO05D001581 1.7e-06 56.2 83 45.8
Carub.0005s1613 Capsella rubella HOM05D001756 ORTHO05D001581 1.7e-06 56.2 36 69.4
BolC8t50097H Brassica oleracea HOM05D001756 ORTHO05D001581 2.2e-06 55.8 83 44.6
Potri.014G006900 Populus trichocarpa HOM05D001756 ORTHO05D001581 2.2e-06 55.8 32 81.2
FAN15G0430 Fragaria x ananassa HOM05D001756 ORTHO05D001581 2.9e-06 55.5 94 36.2
RcHm_v2.0_Chr6g0309921 Rosa chinensis HOM05D001756 ORTHO05D001581 2.9e-06 55.5 97 43.3
Sabra14G0006400 Salix brachista HOM05D001756 ORTHO05D001581 2.9e-06 55.5 35 74.3
FAN20G0846 Fragaria x ananassa HOM05D001756 ORTHO05D001581 3.8e-06 55.1 109 40.4
Sabra02G0091600 Salix brachista HOM05D001756 ORTHO05D001581 3.8e-06 55.1 49 61.2
ATR0739G092 Amborella trichopoda HOM05D001756 ORTHO05D001581 4.9e-06 54.7 85 42.4
CAN.G606.70 Capsicum annuum HOM05D001756 ORTHO05D001581 4.9e-06 54.7 90 44.4
Ca_24672_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 4.9e-06 54.7 47 59.6
Ca_30012_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 4.9e-06 54.7 47 59.6
FAN27G1437 Fragaria x ananassa HOM05D001756 ORTHO05D001581 4.9e-06 54.7 94 36.2
Glyma.17G159000 Glycine max HOM05D001756 ORTHO05D001581 4.9e-06 54.7 51 52.9
Gohir.D12G076500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 4.9e-06 54.7 87 46.0
Gorai.008G085100 Gossypium raimondii HOM05D001756 ORTHO05D001581 4.9e-06 54.7 87 46.0
Nitab4.5_0009491g0010 Nicotiana tabacum HOM05D001756 ORTHO05D001581 4.9e-06 54.7 35 68.6
Peaxi162Scf00340g00412 Petunia axillaris HOM05D001756 ORTHO05D001581 4.9e-06 54.7 34 70.6
Sp5g12310 Schrenkiella parvula HOM05D001756 ORTHO05D001581 4.9e-06 54.7 83 45.8
CARHR158860 Cardamine hirsuta HOM05D001756 ORTHO05D001581 6.4e-06 54.3 83 44.6
Dinv44936 Davidia involucrata HOM05D001756 ORTHO05D001581 6.4e-06 54.3 82 43.9
Duzib264G0169 Durio zibethinus HOM05D001756 ORTHO05D001581 6.4e-06 54.3 82 46.3
Rhsim06G0064200 Rhododendron simsii HOM05D001756 ORTHO05D001581 6.4e-06 54.3 43 60.5
BcaB05g23153 Brassica carinata HOM05D001756 ORTHO05D001581 8.4e-06 53.9 83 45.8
CANSAT25G3420 Cannabis sativa HOM05D001756 ORTHO05D001581 8.4e-06 53.9 85 44.7
Prupe.1G420000 Prunus persica HOM05D001756 ORTHO05D001581 8.4e-06 53.9 55 52.7


User provided reference genes

Program Settings