Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09849 Sequoiadendron giganteum HOM05D004807 ORTHO05D005915 5.9e-74 280.8 143 100.0
CsaV3_7G005520 Cucumis sativus L. HOM05D004807 ORTHO05D005915 3.5e-10 68.9 37 81.1
ClCG10G017810 Citrullus lanatus HOM05D004807 ORTHO05D005915 2.5e-08 62.8 34 82.4
CsaV3_3G038490 Cucumis sativus L. HOM05D004807 ORTHO05D005915 2.5e-08 62.8 34 82.4
Cfa020114 Carpinus fangiana HOM05D004807 ORTHO05D005915 3.3e-08 62.4 35 80.0
CiPaw.09G026200 Carya illinoinensis HOM05D004807 ORTHO05D005915 5.6e-08 61.6 46 60.9
Lj1A1135G80 Lonicera japonica HOM05D004807 ORTHO05D005915 7.3e-08 61.2 45 62.2
Pp3c24_19520 Physcomitrium patens HOM05D004807 ORTHO05D005915 9.5e-08 60.8 48 62.5
TAR623G0137 Trochodendron aralioides HOM05D004807 ORTHO05D005915 1.2e-07 60.5 47 53.2
ATR0665G460 Amborella trichopoda HOM05D004807 ORTHO05D005915 1.6e-07 60.1 37 73.0
Mapoly0005s0200 Marchantia polymorpha HOM05D004807 ORTHO05D005915 1.6e-07 60.1 52 59.6
Lsat_1_v5_gn_2_58060 Lactuca sativa HOM05D004807 ORTHO05D005915 2.1e-07 59.7 54 57.4
Manes.08G040000 Manihot esculenta HOM05D004807 ORTHO05D005915 2.1e-07 59.7 34 76.5
CANSAT64G1965 Cannabis sativa HOM05D004807 ORTHO05D005915 2.8e-07 59.3 35 77.1
Atru.chr8.1221 Acer truncatum HOM05D004807 ORTHO05D005915 6.2e-07 58.2 45 57.8
PSO170G3481 Papaver somniferum HOM05D004807 ORTHO05D005915 6.2e-07 58.2 37 67.6
Phvul.001G200200 Phaseolus vulgaris HOM05D004807 ORTHO05D005915 6.2e-07 58.2 48 60.4
Prupe.7G085900 Prunus persica HOM05D004807 ORTHO05D005915 6.2e-07 58.2 35 74.3
Rhsim03G0002200 Rhododendron simsii HOM05D004807 ORTHO05D005915 6.2e-07 58.2 46 60.9
Rhsim03G0002400 Rhododendron simsii HOM05D004807 ORTHO05D005915 6.2e-07 58.2 46 60.9
Sed0007842 Sechium edule HOM05D004807 ORTHO05D005915 6.2e-07 58.2 34 73.5
Aqoxy1G00442 Aquilegia oxysepala HOM05D004807 ORTHO05D005915 8.1e-07 57.8 46 54.3
Cpa.g.sc85.17 Carica papaya HOM05D004807 ORTHO05D005915 8.1e-07 57.8 47 57.4
VMungo1383G3705 Vigna mungo HOM05D004807 ORTHO05D005915 8.1e-07 57.8 41 61.0
Actinidia22073 Actinidia chinensis HOM05D004807 ORTHO05D005915 1.1e-06 57.4 45 62.2
TWI74G1245 Tripterygium wilfordii HOM05D004807 ORTHO05D005915 1.1e-06 57.4 47 61.7
arahy.Tifrunner.gnm1.ann1.14IR3Z Arachis hypogaea HOM05D004807 ORTHO05D005915 1.4e-06 57.0 33 75.8
arahy.Tifrunner.gnm1.ann1.4PIV4R Arachis hypogaea HOM05D004807 ORTHO05D005915 1.4e-06 57.0 33 75.8
CSS0022615 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 1.4e-06 57.0 45 62.2
Dinv25024 Davidia involucrata HOM05D004807 ORTHO05D005915 1.4e-06 57.0 45 60.0
Gohir.A09G130500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 1.4e-06 57.0 45 57.8
Gohir.D09G126500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 1.4e-06 57.0 45 57.8
Gorai.006G145300 Gossypium raimondii HOM05D004807 ORTHO05D005915 1.4e-06 57.0 45 57.8
PSO528G0235 Papaver somniferum HOM05D004807 ORTHO05D005915 1.4e-06 57.0 37 67.6
Thecc.05G180400 Theobroma cacao HOM05D004807 ORTHO05D005915 1.4e-06 57.0 32 78.1
Nn7g35896 Nelumbo nucifera HOM05D004807 ORTHO05D005915 1.8e-06 56.6 59 50.8
COL.COLO4_29436 Corchorus olitorius HOM05D004807 ORTHO05D005915 2.4e-06 56.2 32 78.1
QL07p025555 Quercus lobata HOM05D004807 ORTHO05D005915 2.4e-06 56.2 34 73.5
HanXRQChr14g0438891 Helianthus annuus HOM05D004807 ORTHO05D005915 3.1e-06 55.8 35 74.3
MD14G1049600 Malus domestica HOM05D004807 ORTHO05D005915 5.2e-06 55.1 33 72.7
Ca_09097_v3 Cicer arietinum L. HOM05D004807 ORTHO05D005915 6.8e-06 54.7 41 61.0
Ciclev10011020m.g Citrus clementina HOM05D004807 ORTHO05D005915 6.8e-06 54.7 33 72.7
Lalb_Chr25g0287671 Lupinus albus HOM05D004807 ORTHO05D005915 6.8e-06 54.7 33 72.7


User provided reference genes

Program Settings