Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09769 Sequoiadendron giganteum HOM05D007176 ORTHO05D009050 4.5e-150 535.0 376 100.0
Manes.09G039600 Manihot esculenta HOM05D007176 ORTHO05D009050 1.5e-60 237.7 289 72.7
Nn2g15783 Nelumbo nucifera HOM05D007176 ORTHO05D009050 5.7e-60 235.7 290 68.6
Lju124C23T17 Lonicera japonica HOM05D007176 ORTHO05D009050 9.7e-60 235.0 289 73.0
Aa31LG10G13110 Aethionema arabicum HOM05D007176 ORTHO05D009050 5.9e-57 225.7 289 61.2
MBI01_g44281_MAGBIO Magnolia biondii HOM05D007176 ORTHO05D009050 7.7e-57 225.3 287 47.4
EL10Ac3g06857 Beta vulgaris HOM05D007176 ORTHO05D009050 1.3e-56 224.6 290 72.1
Cfa020128 Carpinus fangiana HOM05D007176 ORTHO05D009050 1.3e-56 224.6 290 47.6
TAR633G1141 Trochodendron aralioides HOM05D007176 ORTHO05D009050 8.5e-56 221.9 290 70.7
Hma1.2p1_0645F.1_g194890 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 1.1e-55 221.5 290 70.3
Migut.K00028 Erythranthe guttata HOM05D007176 ORTHO05D009050 2.5e-55 220.3 289 70.9
TAR633G0683 Trochodendron aralioides HOM05D007176 ORTHO05D009050 5.5e-55 219.2 290 70.3
Lj5g0009846 Lotus japonicus HOM05D007176 ORTHO05D009050 7.2e-55 218.8 290 70.3
A09p51090 Brassica napus HOM05D007176 ORTHO05D009050 2.1e-54 217.2 314 58.3
Dinv16365 Davidia involucrata HOM05D007176 ORTHO05D009050 4.7e-54 216.1 289 57.4
RcHm_v2.0_Chr3g0478871 Rosa chinensis HOM05D007176 ORTHO05D009050 4.7e-54 216.1 289 59.5
Gohir.A04G053500 Gossypium hirsutum HOM05D007176 ORTHO05D009050 6.1e-54 215.7 288 60.1
BcaC07g40246 Brassica carinata HOM05D007176 ORTHO05D009050 1.0e-53 214.9 288 61.5
arahy.Tifrunner.gnm1.ann1.5B5G66 Arachis hypogaea HOM05D007176 ORTHO05D009050 1.4e-53 214.5 293 69.6
FAN02G0922 Fragaria x ananassa HOM05D007176 ORTHO05D009050 2.3e-53 213.8 289 68.5
CDE04G3485 Ceratophyllum demersum HOM05D007176 ORTHO05D009050 4.0e-53 213.0 290 69.0
FvH4_6g21620 Fragaria vesca HOM05D007176 ORTHO05D009050 4.0e-53 213.0 289 68.5
FAN14G2546 Fragaria x ananassa HOM05D007176 ORTHO05D009050 5.2e-53 212.6 289 68.9
FAN05G5781 Fragaria x ananassa HOM05D007176 ORTHO05D009050 6.7e-53 212.2 295 68.5
Duzib106G0399 Durio zibethinus HOM05D007176 ORTHO05D009050 3.3e-52 209.9 288 56.6
THA.LOC104802720 Tarenaya hassleriana HOM05D007176 ORTHO05D009050 3.3e-52 209.9 289 56.4
Thecc.05G178200 Theobroma cacao HOM05D007176 ORTHO05D009050 4.4e-52 209.5 289 53.3
FAN09G2372 Fragaria x ananassa HOM05D007176 ORTHO05D009050 1.3e-51 208.0 289 67.1
HanXRQChr10g0300591 Helianthus annuus HOM05D007176 ORTHO05D009050 4.1e-50 203.0 287 67.2
arahy.Tifrunner.gnm1.ann1.I5CDLA Arachis hypogaea HOM05D007176 ORTHO05D009050 9.1e-50 201.8 306 66.0
QL07p025011 Quercus lobata HOM05D007176 ORTHO05D009050 1.2e-49 201.4 289 68.2
GSVIVG01033441001 Vitis vinifera HOM05D007176 ORTHO05D009050 1.2e-49 201.4 275 63.3
CiPaw.09G027300 Carya illinoinensis HOM05D007176 ORTHO05D009050 2.7e-49 200.3 288 68.8
ECA247G1245 Erigeron canadensis HOM05D007176 ORTHO05D009050 1.7e-48 197.6 286 67.1
Eucgr.K01865 Eucalyptus grandis HOM05D007176 ORTHO05D009050 2.2e-48 197.2 289 66.8
BolC8t50987H Brassica oleracea HOM05D000032 ORTHO05D001620 3.8e-48 196.4 268 61.9
Prupe.7G084400 Prunus persica HOM05D007176 ORTHO05D009050 3.2e-47 193.4 289 66.8
C08p33910 Brassica napus HOM05D007176 ORTHO05D009050 9.4e-47 191.8 288 58.0
Potri.006G195800 Populus trichocarpa HOM05D007176 ORTHO05D009050 1.6e-46 191.0 288 66.3
TPR.G19346 Trifolium pratense HOM05D007176 ORTHO05D009050 6.1e-46 189.1 319 61.8
AL5G40300 Arabidopsis lyrata HOM05D007176 ORTHO05D009050 4.4e-44 183.0 288 64.2
Os02g0281150 Oryza sativa ssp. japonica HOM05D007176 ORTHO05D009050 1.7e-43 181.0 290 60.7
Gohir.D04G094700 Gossypium hirsutum HOM05D007176 ORTHO05D009050 2.2e-43 180.6 268 56.3
Cpa.g.sc85.35 Carica papaya HOM05D007176 ORTHO05D009050 1.1e-42 178.3 289 65.4
Thhalv10006065m.g Eutrema salsugineum HOM05D007176 ORTHO05D009050 2.4e-42 177.2 288 63.9
Sabra06G0150500 Salix brachista HOM05D007176 ORTHO05D009050 2.4e-42 177.2 289 63.7
PGR142G3952 Punica granatum HOM05D007176 ORTHO05D009050 7.0e-42 175.6 289 63.3
CARHR168930 Cardamine hirsuta HOM05D007176 ORTHO05D009050 9.1e-42 175.3 288 54.5
MD14G1051600 Malus domestica HOM05D007176 ORTHO05D009050 1.2e-41 174.9 288 53.1
Sc13g0002490 Simmondsia chinensis HOM05D007176 ORTHO05D009050 1.2e-41 174.9 290 55.5
CANSAT64G0938 Cannabis sativa HOM05D007176 ORTHO05D009050 4.5e-41 172.9 288 62.5
Gorai.009G392400 Gossypium raimondii HOM05D007176 ORTHO05D009050 4.5e-41 172.9 303 53.5
Carub.0005s2528 Capsella rubella HOM05D007176 ORTHO05D009050 2.2e-40 170.6 288 62.8
DCAR_019856 Daucus carota HOM05D007176 ORTHO05D009050 2.2e-40 170.6 284 40.1
Sp5g04340 Schrenkiella parvula HOM05D007176 ORTHO05D009050 3.8e-40 169.9 288 50.7
SalBow1G6257 Salvia bowleyana HOM05D007176 ORTHO05D009050 5.0e-40 169.5 297 61.3
MD12G1053200 Malus domestica HOM05D007176 ORTHO05D009050 6.5e-40 169.1 289 61.9
Medtr1g054625 Medicago truncatula HOM05D007176 ORTHO05D009050 7.2e-39 165.6 290 62.1
AUR62032747 Chenopodium quinoa HOM05D007176 ORTHO05D009050 2.1e-38 164.1 276 65.9
AT3G58530 Arabidopsis thaliana HOM05D007176 ORTHO05D009050 4.7e-38 162.9 288 60.8
BcaC02g10014 Brassica carinata HOM05D007176 ORTHO05D009050 1.4e-37 161.4 288 61.1
BraA09t40553Z Brassica rapa HOM05D000032 ORTHO05D001620 1.8e-37 161.0 269 55.8
Pp3c23_2930 Physcomitrium patens HOM05D007176 ORTHO05D009050 2.3e-37 160.6 292 56.2
Rhsim04G0094400 Rhododendron simsii HOM05D007176 ORTHO05D009050 4.0e-37 159.8 289 62.6
SMO118G0524 Selaginella moellendorffii HOM05D007176 ORTHO05D009050 4.0e-37 159.8 299 57.2
CSS0044198 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 1.2e-36 158.3 287 62.7
Ca_03573_v3 Cicer arietinum L. HOM05D007176 ORTHO05D009050 2.0e-36 157.5 290 60.7
Ah.13g075580 Amaranthus hybridus HOM05D007176 ORTHO05D009050 2.6e-36 157.1 240 71.2
Glyma.09G105500 Glycine max HOM05D007176 ORTHO05D009050 3.4e-36 156.8 290 61.4
Hund24823 Selenicereus undatus HOM05D007176 ORTHO05D009050 2.8e-35 153.7 122 63.9
Sopen06g001340 Solanum pennellii HOM05D007176 ORTHO05D009050 1.1e-34 151.8 289 52.2
vmacro22113 Vaccinium macrocarpon HOM05D007176 ORTHO05D009050 1.4e-34 151.4 306 35.0
Hma1.2p1_0645F.1_g194900 Hydrangea macrophylla HOM05D007176 ORTHO05D009050 1.8e-34 151.0 240 69.6
Actinidia17284 Actinidia chinensis HOM05D007176 ORTHO05D009050 3.1e-34 150.2 290 55.5
Cc06_g15630 Coffea canephora HOM05D007176 ORTHO05D009050 1.2e-33 148.3 289 60.6
PSO541G4948 Papaver somniferum HOM05D007176 ORTHO05D009050 3.5e-33 146.7 240 65.4
HPP92_010126 Vanilla planifolia HOM05D007176 ORTHO05D009050 3.5e-33 146.7 238 69.3
BolC4t24963H Brassica oleracea HOM05D000032 ORTHO05D001620 4.5e-33 146.4 268 62.3
C04p33960 Brassica napus HOM05D007176 ORTHO05D009050 1.0e-32 145.2 268 62.3
Peaxi162Scf00258g00925 Petunia axillaris HOM05D007176 ORTHO05D009050 1.0e-32 145.2 289 60.9
Lalb_Chr02g0153821 Lupinus albus HOM05D007176 ORTHO05D009050 1.3e-32 144.8 290 59.7
PGSC0003DMG400029168 Solanum tuberosum HOM05D007176 ORTHO05D009050 1.3e-32 144.8 289 59.9
Haze_20048 Corylus avellana HOM05D007176 ORTHO05D009050 2.9e-32 143.7 322 35.4
Haze_20055 Corylus avellana HOM05D007176 ORTHO05D009050 2.9e-32 143.7 322 35.4
Solyc06g005380.3 Solanum lycopersicum HOM05D007176 ORTHO05D009050 6.6e-32 142.5 289 59.9
Zm00001eb237210 Zea mays HOM05D007176 ORTHO05D009050 1.1e-31 141.7 291 57.7
CAN.G111.5 Capsicum annuum HOM05D007176 ORTHO05D009050 1.9e-31 141.0 289 59.5
COL.COLO4_29390 Corchorus olitorius HOM05D007176 ORTHO05D009050 4.3e-31 139.8 274 48.2
Atru.BG.213.p Acer truncatum HOM05D007176 ORTHO05D009050 2.1e-30 137.5 295 58.3
AagrBONN_evm.TU.Sc2ySwM_228.1251 Anthoceros agrestis HOM05D007176 ORTHO05D009050 1.0e-29 135.2 287 56.1
CSS0035640 Camellia sinensis var. sinensis HOM05D007176 ORTHO05D009050 3.0e-29 133.7 287 59.9
PSO675G7508 Papaver somniferum HOM05D007176 ORTHO05D009050 8.3e-27 125.6 240 54.6
Mapoly0209s0007 Marchantia polymorpha HOM05D007176 ORTHO05D009050 1.1e-26 125.2 120 53.3
Lsat_1_v5_gn_9_26900 Lactuca sativa HOM05D007176 ORTHO05D009050 2.4e-26 124.0 298 39.3
VMungo0720G0788 Vigna mungo HOM05D007176 ORTHO05D009050 4.1e-26 123.2 351 29.1
Aqoxy279s002 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 2.7e-25 120.6 298 56.0
Aqoxy2G00051 Aquilegia oxysepala HOM05D007176 ORTHO05D009050 2.7e-25 120.6 298 56.0
unitig_736.g22301 Utricularia gibba HOM05D007176 ORTHO05D009050 6.6e-24 115.9 292 55.5
Nitab4.5_0008255g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.1e-23 115.2 289 31.8
Psat6g088000 Pisum sativum HOM05D007176 ORTHO05D009050 6.2e-22 109.4 290 53.8
Hund24819 Selenicereus undatus HOM05D007176 ORTHO05D001610 2.3e-21 107.5 124 49.2
A04p02540 Brassica napus HOM05D000032 ORTHO05D001620 6.4e-19 99.4 107 50.5
AUR62015309 Chenopodium quinoa HOM05D007176 ORTHO05D009050 8.3e-19 99.0 110 50.0
HanXRQChr05g0140621 Helianthus annuus HOM05D007176 ORTHO05D009050 1.1e-18 98.6 98 56.1
HanXRQChr10g0316231 Helianthus annuus HOM05D007176 ORTHO05D009050 1.1e-18 98.6 98 56.1
ATR0001G043 Amborella trichopoda HOM05D007176 ORTHO05D009050 1.4e-18 98.2 71 63.4
arahy.Tifrunner.gnm1.ann1.0S64XP Arachis hypogaea HOM05D007176 ORTHO05D009050 1.4e-18 98.2 268 35.8
Nitab4.5_0000009g0020 Nicotiana tabacum HOM05D007176 ORTHO05D009050 1.9e-18 97.8 124 46.0
SGA_v2.0_scaffold274G46490 Striga asiatica HOM05D007176 ORTHO05D009050 3.5e-17 93.6 81 58.0
SEGI_13305 Sequoiadendron giganteum HOM05D001027 ORTHO05D000844 7.3e-15 85.9 72 59.7
PRCOL_00005880 Prasinoderma coloniale HOM05D007176 ORTHO05D009050 1.2e-14 85.1 119 42.0
Phvul.007G261900 Phaseolus vulgaris HOM05D007176 ORTHO05D009050 2.1e-14 84.3 80 55.0
SEGI_26144 Sequoiadendron giganteum HOM05D000918 ORTHO05D000791 1.7e-11 74.7 59 55.9
Ciclev10012430m.g Citrus clementina HOM05D007176 ORTHO05D009050 4.9e-11 73.2 63 60.3
Atru.chr8.1185 Acer truncatum HOM05D007176 ORTHO05D009050 1.2e-09 68.6 65 53.8


User provided reference genes

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