Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 7.1e-136 487.3 247 100.0
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 1.1e-117 426.8 215 100.0
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 9.2e-59 231.1 200 60.0
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 3.0e-57 226.1 198 56.6
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 3.0e-57 226.1 211 53.6
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 8.6e-57 224.6 191 59.2
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.1e-56 224.2 186 59.7
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 1.9e-56 223.4 200 59.5
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 1.9e-56 223.4 211 54.0
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 2.5e-56 223.0 203 57.1
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 2.5e-56 223.0 206 58.3
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 2.1e-55 219.9 198 55.6
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 3.6e-55 219.2 193 59.1
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 6.2e-55 218.4 189 59.3
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 1.1e-54 217.6 219 53.4
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 1.8e-54 216.9 193 58.0
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 1.8e-54 216.9 202 54.0
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 3.1e-54 216.1 204 55.4
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 3.1e-54 216.1 214 53.7
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 3.1e-54 216.1 237 52.3
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 5.2e-54 215.3 200 55.0
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 6.8e-54 214.9 206 55.3
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 6.8e-54 214.9 219 53.0
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 6.8e-54 214.9 207 54.6
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 6.8e-54 214.9 231 50.6
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 8.9e-54 214.5 191 57.6
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 1.2e-53 214.2 186 54.3
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 1.5e-53 213.8 220 53.6
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 1.5e-53 213.8 188 59.0
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 3.4e-53 212.6 215 50.7
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 3.4e-53 212.6 202 55.9
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 4.4e-53 212.2 190 56.8
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 4.4e-53 212.2 193 57.5
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 4.4e-53 212.2 191 57.6
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 5.8e-53 211.8 192 55.7
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 5.8e-53 211.8 192 55.7
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 5.8e-53 211.8 188 58.0
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 5.8e-53 211.8 205 52.2
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 9.9e-53 211.1 217 53.5
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 1.3e-52 210.7 205 53.7
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 1.3e-52 210.7 202 55.4
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 1.7e-52 210.3 192 58.3
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 1.7e-52 210.3 246 48.0
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 2.2e-52 209.9 233 47.6
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 2.2e-52 209.9 190 55.3
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 2.2e-52 209.9 184 60.3
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 3.7e-52 209.1 205 52.7
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 3.7e-52 209.1 195 53.8
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 3.7e-52 209.1 233 51.5
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 6.4e-52 208.4 206 52.4
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 8.4e-52 208.0 183 59.0
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 1.1e-51 207.6 201 53.7
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 1.1e-51 207.6 186 55.4
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 1.4e-51 207.2 192 53.1
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 3.2e-51 206.1 197 54.8
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 4.1e-51 205.7 215 50.7
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 5.4e-51 205.3 197 54.3
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 5.4e-51 205.3 203 52.2
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.4e-51 205.3 215 50.7
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 5.4e-51 205.3 189 55.6
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 7.1e-51 204.9 205 52.2
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 7.1e-51 204.9 204 54.4
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 1.2e-50 204.1 191 55.5
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 1.6e-50 203.8 181 56.9
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.6e-50 203.8 215 50.2
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 2.7e-50 203.0 204 50.0
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 2.7e-50 203.0 191 55.0
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 3.5e-50 202.6 184 56.0
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 3.5e-50 202.6 190 56.3
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 1.3e-49 200.7 202 52.0
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 1.3e-49 200.7 192 54.7
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 1.3e-49 200.7 196 54.1
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 3.0e-49 199.5 186 53.2
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 3.0e-49 199.5 186 53.2
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 3.0e-49 199.5 195 54.4
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 3.9e-49 199.1 181 57.5
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 5.1e-49 198.7 214 51.9
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 6.6e-49 198.4 212 51.9
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 6.6e-49 198.4 203 52.7
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 1.1e-48 197.6 224 49.6
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 1.5e-48 197.2 195 52.8
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 4.3e-48 195.7 182 54.4
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 5.6e-48 195.3 201 52.2
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 2.1e-47 193.4 187 54.0
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 2.1e-47 193.4 193 53.9
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 4.7e-47 192.2 205 52.7
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 1.4e-46 190.7 180 57.8
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 2.4e-46 189.9 223 49.3
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 9.9e-45 184.5 190 53.2
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 1.3e-44 184.1 188 51.1
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 2.4e-43 179.9 128 64.8
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 7.1e-43 178.3 198 49.0
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 3.9e-41 172.6 204 52.0
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 6.6e-41 171.8 191 50.8
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 2.5e-40 169.9 197 46.2
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 3.1e-38 162.9 237 43.9
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 6.9e-38 161.8 179 50.8
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 9.9e-37 157.9 189 46.0
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 5.6e-32 142.1 213 41.8
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 7.1e-19 98.6 135 43.0
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 2.1e-18 97.1 135 42.2
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 2.1e-18 97.1 135 42.2
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 1.0e-17 94.7 99 49.5
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 2.3e-17 93.6 197 36.0
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 2.3e-17 93.6 197 36.0
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 2.4e-14 83.6 143 39.2
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 2.4e-14 83.6 139 43.9
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 1.2e-13 81.3 124 38.7
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 2.0e-13 80.5 101 45.5
Sc07g0010050 Simmondsia chinensis HOM05D006578 ORTHO05D008100 2.6e-13 80.1 114 43.9
Lj1g0003243 Lotus japonicus HOM05D006578 ORTHO05D008100 3.4e-13 79.7 120 39.2
Phvul.008G068900 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 3.4e-13 79.7 107 40.2
Glyma.09G263100 Glycine max HOM05D006578 ORTHO05D008100 7.6e-13 78.6 110 42.7
arahy.Tifrunner.gnm1.ann1.6WXN94 Arachis hypogaea HOM05D006578 ORTHO05D008100 1.7e-12 77.4 101 41.6
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 1.7e-12 77.4 115 37.4
arahy.Tifrunner.gnm1.ann1.UYM9MT Arachis hypogaea HOM05D006578 ORTHO05D008100 5.0e-12 75.9 100 42.0
Sabra15G0075700 Salix brachista HOM05D000345 ORTHO05D000215 2.5e-11 73.6 123 38.2
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 5.5e-11 72.4 103 40.8
Psat3g111760 Pisum sativum HOM05D006578 ORTHO05D008100 1.2e-10 71.2 92 41.3
VMungo1383G2377 Vigna mungo HOM05D006578 ORTHO05D008100 3.5e-10 69.7 99 41.4
Glyma.18G229100 Glycine max HOM05D006578 ORTHO05D008100 1.8e-09 67.4 99 39.4
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 3.0e-09 66.6 61 54.1
Glyma.03G015000 Glycine max HOM05D006578 ORTHO05D008100 9.7e-08 61.6 81 42.0


User provided reference genes

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