Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09682 Sequoiadendron giganteum HOM05D000926 ORTHO05D000707 1.5e-95 352.8 171 100.0
SEGI_03245 Sequoiadendron giganteum HOM05D000926 ORTHO05D000707 3.8e-27 125.6 113 57.5
SEGI_00662 Sequoiadendron giganteum HOM05D000926 ORTHO05D000707 1.3e-24 117.1 123 50.4
SEGI_08130 Sequoiadendron giganteum HOM05D000926 ORTHO05D000707 9.6e-23 110.9 119 48.7
SEGI_41126 Sequoiadendron giganteum HOM05D002809 ORTHO05D012113 2.0e-12 76.6 42 83.3
Phvul.003G149300 Phaseolus vulgaris HOM05D000926 ORTHO05D000707 2.1e-09 66.6 102 38.2
Hma1.2p1_0156F.1_g068910 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 4.6e-09 65.5 127 34.6
Hma1.2p1_0790F.1_g218420 Hydrangea macrophylla HOM05D000926 ORTHO05D000707 4.6e-09 65.5 127 34.6
QL02p096618 Quercus lobata HOM05D000926 ORTHO05D000707 6.1e-09 65.1 102 39.2
Cfa013532 Carpinus fangiana HOM05D000926 ORTHO05D000707 5.1e-08 62.0 106 42.5
CiPaw.07G188500 Carya illinoinensis HOM05D000926 ORTHO05D000707 8.7e-08 61.2 101 41.6
VMungo1215G1083 Vigna mungo HOM05D000926 ORTHO05D000707 8.7e-08 61.2 117 36.8
Ca_21193_v3 Cicer arietinum L. HOM05D000926 ORTHO05D000707 1.9e-07 60.1 99 37.4
CsaV3_1G031200 Cucumis sativus L. HOM05D000926 ORTHO05D000707 3.3e-07 59.3 112 34.8
Dinv41288 Davidia involucrata HOM05D000926 ORTHO05D000707 3.3e-07 59.3 117 31.6
Dinv42764 Davidia involucrata HOM05D000926 ORTHO05D000707 5.7e-07 58.5 108 36.1
Glyma.04G058800 Glycine max HOM05D000926 ORTHO05D000707 7.4e-07 58.2 89 39.3
Sed0018092 Sechium edule HOM05D000926 ORTHO05D000707 7.4e-07 58.2 109 37.6
CiPaw.08G038300 Carya illinoinensis HOM05D000926 ORTHO05D000707 9.7e-07 57.8 101 40.6
Sed0014083 Sechium edule HOM05D000926 ORTHO05D000707 9.7e-07 57.8 109 36.7
Ah.09g229670 Amaranthus hybridus HOM05D000926 ORTHO05D000707 1.3e-06 57.4 142 35.2
Lalb_Chr13g0300411 Lupinus albus HOM05D000926 ORTHO05D000707 1.3e-06 57.4 104 33.7
arahy.Tifrunner.gnm1.ann1.0G1U1N Arachis hypogaea HOM05D000926 ORTHO05D000707 2.2e-06 56.6 95 38.9
Glyma.13G093500 Glycine max HOM05D000926 ORTHO05D000707 2.2e-06 56.6 91 37.4
Glyma.17G066900 Glycine max HOM05D000926 ORTHO05D000707 2.2e-06 56.6 91 37.4
Medtr4g129020 Medicago truncatula HOM05D000926 ORTHO05D000707 2.2e-06 56.6 105 36.2
A01p17000 Brassica napus HOM05D000926 ORTHO05D000707 2.8e-06 56.2 112 36.6
BraA01t01656Z Brassica rapa HOM05D000926 ORTHO05D000707 2.8e-06 56.2 112 36.6
Manes.16G133400 Manihot esculenta HOM05D000926 ORTHO05D000707 2.8e-06 56.2 118 38.1
HPP92_018521 Vanilla planifolia HOM05D000926 ORTHO05D000707 2.8e-06 56.2 120 33.3
MD08G1049400 Malus domestica HOM05D000926 ORTHO05D000707 3.7e-06 55.8 105 33.3
PGR044G0045 Punica granatum HOM05D000926 ORTHO05D000707 3.7e-06 55.8 94 39.4
Thecc.09G010900 Theobroma cacao HOM05D000926 ORTHO05D000707 3.7e-06 55.8 96 39.6
CsaV3_2G032650 Cucumis sativus L. HOM05D000926 ORTHO05D000707 4.8e-06 55.5 91 38.5
Gohir.A13G211500 Gossypium hirsutum HOM05D000926 ORTHO05D000707 4.8e-06 55.5 113 38.9
Gorai.001G039700 Gossypium raimondii HOM05D000926 ORTHO05D000707 4.8e-06 55.5 105 38.1
Lj4g0013069 Lotus japonicus HOM05D000926 ORTHO05D000707 4.8e-06 55.5 106 34.0
Manes.03G005800 Manihot esculenta HOM05D000926 ORTHO05D000707 4.8e-06 55.5 101 37.6
TPR.G5343 Trifolium pratense HOM05D000926 ORTHO05D000707 4.8e-06 55.5 100 35.0
Zm00001eb040900 Zea mays HOM05D000926 ORTHO05D000707 4.8e-06 55.5 112 33.9
Gohir.D13G215500 Gossypium hirsutum HOM05D000926 ORTHO05D000707 6.3e-06 55.1 108 38.0
Gorai.013G245900 Gossypium raimondii HOM05D000926 ORTHO05D000707 6.3e-06 55.1 108 38.0
Psat4g011960 Pisum sativum HOM05D000926 ORTHO05D000707 6.3e-06 55.1 89 38.2
TWI32G1064 Tripterygium wilfordii HOM05D000926 ORTHO05D000707 6.3e-06 55.1 99 36.4
Cc06_g13710 Coffea canephora HOM05D000926 ORTHO05D000707 8.2e-06 54.7 106 37.7
Psat0s2127g0040 Pisum sativum HOM05D000926 ORTHO05D000707 8.2e-06 54.7 101 36.6
TWI34G1370 Tripterygium wilfordii HOM05D000926 ORTHO05D000707 8.2e-06 54.7 90 42.2


User provided reference genes

Program Settings