Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09604 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 2.6e-107 392.1 206 100.0
Manes.02G202700 Manihot esculenta HOM05D004360 ORTHO05D005195 9.7e-62 240.7 184 65.8
ATR1089G020 Amborella trichopoda HOM05D004360 ORTHO05D005195 1.7e-61 240.0 184 67.4
GSVIVG01037160001 Vitis vinifera HOM05D004360 ORTHO05D005195 1.7e-61 240.0 184 64.7
Hma1.2p1_0016F.1_g010960 Hydrangea macrophylla HOM05D004360 ORTHO05D005195 6.3e-61 238.0 178 66.3
Manes.18G109100 Manihot esculenta HOM05D004360 ORTHO05D005195 5.3e-60 235.0 178 66.3
MBI03_g07140_MAGBIO Magnolia biondii HOM05D004360 ORTHO05D005195 6.9e-60 234.6 187 62.6
Nn5g27232 Nelumbo nucifera HOM05D004360 ORTHO05D005195 9.1e-60 234.2 174 68.4
QL09p001278 Quercus lobata HOM05D004360 ORTHO05D005195 1.0e-58 230.7 179 65.4
Potri.013G095200 Populus trichocarpa HOM05D004360 ORTHO05D005195 1.7e-58 229.9 178 66.9
PGR083G1110 Punica granatum HOM05D004360 ORTHO05D005195 3.8e-58 228.8 184 63.0
Glyma.06G323900 Glycine max HOM05D004360 ORTHO05D005195 5.0e-58 228.4 177 65.5
Glyma.04G110500 Glycine max HOM05D004360 ORTHO05D005195 6.5e-58 228.0 184 63.0
Duzib116G0053 Durio zibethinus HOM05D004360 ORTHO05D005195 1.1e-57 227.3 174 67.2
Lalb_Chr18g0048451 Lupinus albus HOM05D004360 ORTHO05D005195 1.4e-57 226.9 176 66.5
PSO761G0584 Papaver somniferum HOM05D004360 ORTHO05D005195 1.4e-57 226.9 174 65.5
TAR628G1251 Trochodendron aralioides HOM05D004360 ORTHO05D005195 1.4e-57 226.9 182 62.6
TWI12G0674 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 2.5e-57 226.1 184 63.6
COL.COLO4_25070 Corchorus olitorius HOM05D004360 ORTHO05D005195 4.2e-57 225.3 174 66.7
Actinidia01542 Actinidia chinensis HOM05D004360 ORTHO05D005195 5.5e-57 224.9 184 63.0
Psat5g232320 Pisum sativum HOM05D004360 ORTHO05D005195 5.5e-57 224.9 182 61.0
TPR.G25525 Trifolium pratense HOM05D004360 ORTHO05D005195 5.5e-57 224.9 184 60.3
Potri.003G048300 Populus trichocarpa HOM05D004360 ORTHO05D005195 1.2e-56 223.8 184 63.6
Thecc.08G168700 Theobroma cacao HOM05D004360 ORTHO05D005195 1.2e-56 223.8 169 67.5
Medtr3g006190 Medicago truncatula HOM05D004360 ORTHO05D005195 2.1e-56 223.0 184 60.3
Cc10_g16090 Coffea canephora HOM05D004360 ORTHO05D005195 2.7e-56 222.6 180 65.0
MD05G1006100 Malus domestica HOM05D004360 ORTHO05D005195 2.7e-56 222.6 184 63.6
Phvul.005G002300 Phaseolus vulgaris HOM05D004360 ORTHO05D005195 2.7e-56 222.6 179 62.6
Lj3g0027106 Lotus japonicus HOM05D004360 ORTHO05D005195 4.7e-56 221.9 185 62.7
Oeu020627.1 Olea europaea HOM05D004360 ORTHO05D005195 4.7e-56 221.9 178 62.4
VMungo1080G0197 Vigna mungo HOM05D004360 ORTHO05D005195 4.7e-56 221.9 174 66.1
PGSC0003DMG400033136 Solanum tuberosum HOM05D004360 ORTHO05D005195 6.1e-56 221.5 177 64.4
arahy.Tifrunner.gnm1.ann1.4Y3JNF Arachis hypogaea HOM05D004360 ORTHO05D005195 7.9e-56 221.1 185 61.1
DCAR_014061 Daucus carota HOM05D004360 ORTHO05D005195 7.9e-56 221.1 179 62.6
Nitab4.5_0007335g0050 Nicotiana tabacum HOM05D004360 ORTHO05D005195 7.9e-56 221.1 174 66.7
CsaV3_2G033320 Cucumis sativus L. HOM05D004360 ORTHO05D005195 1.0e-55 220.7 174 64.9
CANSAT56G1596 Cannabis sativa HOM05D004360 ORTHO05D005195 1.4e-55 220.3 179 62.6
CSS0027083 Camellia sinensis var. sinensis HOM05D004360 ORTHO05D005195 1.8e-55 219.9 178 64.0
MELO3C008103.2 Cucumis melo HOM05D004360 ORTHO05D005195 1.8e-55 219.9 174 64.4
SGA_v2.0_scaffold118G32638 Striga asiatica HOM05D004360 ORTHO05D005195 2.3e-55 219.5 187 63.6
Lj7A416T39 Lonicera japonica HOM05D004360 ORTHO05D005195 3.0e-55 219.2 172 65.1
Sopen06g022920 Solanum pennellii HOM05D004360 ORTHO05D005195 3.9e-55 218.8 177 63.8
Nitab4.5_0007657g0070 Nicotiana tabacum HOM05D004360 ORTHO05D005195 6.7e-55 218.0 195 61.5
Peaxi162Scf00078g00103 Petunia axillaris HOM05D004360 ORTHO05D005195 6.7e-55 218.0 193 59.6
Eucgr.F04085 Eucalyptus grandis HOM05D004360 ORTHO05D005195 8.8e-55 217.6 179 62.6
Gohir.A05G248500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 8.8e-55 217.6 174 63.8
Solyc06g064450.3 Solanum lycopersicum HOM05D004360 ORTHO05D005195 8.8e-55 217.6 177 63.8
PSO210G5265 Papaver somniferum HOM05D004360 ORTHO05D005195 1.1e-54 217.2 170 64.1
Gohir.D05G250900 Gossypium hirsutum HOM05D004360 ORTHO05D005195 2.6e-54 216.1 174 63.2
Gorai.009G262300 Gossypium raimondii HOM05D004360 ORTHO05D005195 2.6e-54 216.1 174 63.2
ClCG11G008280 Citrullus lanatus HOM05D004360 ORTHO05D005195 4.4e-54 215.3 169 65.1
Aqoxy5G01853 Aquilegia oxysepala HOM05D004360 ORTHO05D005195 5.7e-54 214.9 178 62.9
Carub.0001s3168 Capsella rubella HOM05D004360 ORTHO05D005195 5.7e-54 214.9 167 63.5
Hund16918 Selenicereus undatus HOM05D004360 ORTHO05D005195 5.7e-54 214.9 184 58.7
Atru.chr13.2581 Acer truncatum HOM05D004360 ORTHO05D005195 9.7e-54 214.2 177 60.5
Prupe.8G003400 Prunus persica HOM05D004360 ORTHO05D005195 9.7e-54 214.2 173 64.2
AL1G47880 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 2.2e-53 213.0 167 63.5
AUR62013395 Chenopodium quinoa HOM05D004360 ORTHO05D005195 2.2e-53 213.0 181 61.3
Oeu028624.1 Olea europaea HOM05D004360 ORTHO05D005195 2.2e-53 213.0 197 56.9
AUR62038546 Chenopodium quinoa HOM05D004360 ORTHO05D005195 2.8e-53 212.6 181 60.8
Peaxi162Scf00818g00320 Petunia axillaris HOM05D004360 ORTHO05D005195 2.8e-53 212.6 172 62.8
THA.LOC104806751 Tarenaya hassleriana HOM05D004360 ORTHO05D005195 4.8e-53 211.8 182 62.6
CAN.G14.46 Capsicum annuum HOM05D004360 ORTHO05D005195 6.3e-53 211.5 174 62.6
CDE08G1539 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 1.1e-52 210.7 184 59.2
MD10G1002100 Malus domestica HOM05D004360 ORTHO05D005195 1.1e-52 210.7 169 63.3
HPP92_001197 Vanilla planifolia HOM05D004360 ORTHO05D005195 1.8e-52 209.9 186 55.4
Actinidia29366 Actinidia chinensis HOM05D004360 ORTHO05D005195 4.1e-52 208.8 213 54.0
Lalb_Chr01g0008181 Lupinus albus HOM05D004360 ORTHO05D005195 4.1e-52 208.8 179 60.3
CARHR261230 Cardamine hirsuta HOM05D004360 ORTHO05D005195 7.0e-52 208.0 184 58.7
AUR62038559 Chenopodium quinoa HOM05D004360 ORTHO05D005195 7.0e-52 208.0 168 63.1
EL10Ac1g01286 Beta vulgaris HOM05D004360 ORTHO05D005195 1.2e-51 207.2 183 59.0
Os05g0105500 Oryza sativa ssp. japonica HOM05D004360 ORTHO05D005195 1.2e-51 207.2 164 62.2
Solyc11g045030.2 Solanum lycopersicum HOM05D004360 ORTHO05D005195 1.6e-51 206.8 193 56.5
MSTRG.1609 Avicennia marina HOM05D004360 ORTHO05D005195 3.5e-51 205.7 187 60.4
Sed0011254 Sechium edule HOM05D004360 ORTHO05D005195 3.5e-51 205.7 174 59.8
HPP92_009217 Vanilla planifolia HOM05D004360 ORTHO05D005195 3.5e-51 205.7 185 58.4
BcaC08g43849 Brassica carinata HOM05D004360 ORTHO05D005195 4.5e-51 205.3 181 57.5
A09p32780 Brassica napus HOM05D004360 ORTHO05D005195 4.5e-51 205.3 179 58.1
BolC6t36383H Brassica oleracea HOM05D004360 ORTHO05D005195 4.5e-51 205.3 181 57.5
BraA09t38813Z Brassica rapa HOM05D004360 ORTHO05D005195 4.5e-51 205.3 179 58.1
unitig_8.g4904 Utricularia gibba HOM05D004360 ORTHO05D005195 4.5e-51 205.3 177 58.8
Sopen11g020480 Solanum pennellii HOM05D004360 ORTHO05D005195 5.9e-51 204.9 193 57.5
Psat7g229800 Pisum sativum HOM05D004360 ORTHO05D005195 1.0e-50 204.1 178 59.6
AL6G43950 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 1.3e-50 203.8 185 58.4
RcHm_v2.0_Chr6g0249591 Rosa chinensis HOM05D004360 ORTHO05D005195 1.7e-50 203.4 169 60.9
Medtr4g030060 Medicago truncatula HOM05D004360 ORTHO05D005195 2.2e-50 203.0 178 57.9
Carub.0006s2871 Capsella rubella HOM05D004360 ORTHO05D005195 2.9e-50 202.6 184 57.1
Sp6g07270 Schrenkiella parvula HOM05D004360 ORTHO05D005195 2.9e-50 202.6 184 57.6
Sed0002471 Sechium edule HOM05D004360 ORTHO05D005195 2.9e-50 202.6 160 64.4
AT4G10140 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 3.8e-50 202.2 184 57.6
A02p26710 Brassica napus HOM05D004360 ORTHO05D005195 3.8e-50 202.2 167 60.5
BraA02t07674Z Brassica rapa HOM05D004360 ORTHO05D005195 3.8e-50 202.2 167 60.5
Thhalv10008879m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 3.8e-50 202.2 181 56.9
C06p12320 Brassica napus HOM05D004360 ORTHO05D005195 5.0e-50 201.8 181 56.9
BcaB07g32992 Brassica carinata HOM05D004360 ORTHO05D005195 8.5e-50 201.1 165 61.8
BcaC03g16418 Brassica carinata HOM05D004360 ORTHO05D005195 8.5e-50 201.1 167 60.5
C02p42460 Brassica napus HOM05D004360 ORTHO05D005195 8.5e-50 201.1 167 60.5
Ciclev10022474m.g Citrus clementina HOM05D004360 ORTHO05D005195 1.1e-49 200.7 173 59.0
Thhalv10029009m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 1.1e-49 200.7 166 60.8
FvH4_2g00310 Fragaria vesca HOM05D004360 ORTHO05D005195 1.1e-49 200.7 170 61.2
PGSC0003DMG400006668 Solanum tuberosum HOM05D004360 ORTHO05D005195 1.9e-49 199.9 193 54.9
FAN20G2250 Fragaria x ananassa HOM05D004360 ORTHO05D005195 4.2e-49 198.7 170 60.0
Gohir.D08G249500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 4.2e-49 198.7 154 63.6
Gorai.004G266100 Gossypium raimondii HOM05D004360 ORTHO05D005195 4.2e-49 198.7 154 63.6
TWI18G1157 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 4.2e-49 198.7 170 62.4
BcaB05g23914 Brassica carinata HOM05D004360 ORTHO05D005195 5.5e-49 198.4 167 59.3
ECA247G3060 Erigeron canadensis HOM05D004360 ORTHO05D005195 5.5e-49 198.4 185 55.7
Gohir.A08G229200 Gossypium hirsutum HOM05D004360 ORTHO05D005195 5.5e-49 198.4 154 63.0
A09p28790 Brassica napus HOM05D004360 ORTHO05D005195 7.2e-49 198.0 181 56.4
Aa31LG6G7960 Aethionema arabicum HOM05D004360 ORTHO05D005195 1.2e-48 197.2 173 58.4
Lsat_1_v5_gn_1_24560 Lactuca sativa HOM05D004360 ORTHO05D005195 1.2e-48 197.2 182 57.7
HanXRQChr08g0226271 Helianthus annuus HOM05D004360 ORTHO05D005195 1.6e-48 196.8 162 60.5
Lsat_1_v5_gn_6_109600 Lactuca sativa HOM05D004360 ORTHO05D005195 1.6e-48 196.8 166 60.2
HanXRQChr05g0150501 Helianthus annuus HOM05D004360 ORTHO05D005195 2.1e-48 196.4 178 55.6
arahy.Tifrunner.gnm1.ann1.19X5J5 Arachis hypogaea HOM05D004360 ORTHO05D005195 2.7e-48 196.1 160 63.8
Nitab4.5_0000079g0160 Nicotiana tabacum HOM05D004360 ORTHO05D005195 2.7e-48 196.1 193 56.5
CAN.G970.20 Capsicum annuum HOM05D004360 ORTHO05D005195 3.0e-47 192.6 196 55.1
C09p36560 Brassica napus HOM05D004360 ORTHO05D005195 6.7e-47 191.4 145 64.8
Zm00001eb207120 Zea mays HOM05D004360 ORTHO05D005195 6.7e-47 191.4 171 53.8
CDE02G3351 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 2.6e-46 189.5 160 60.6
HanXRQChr12g0369241 Helianthus annuus HOM05D004360 ORTHO05D005195 1.3e-45 187.2 174 55.2
Zm00001eb289060 Zea mays HOM05D004360 ORTHO05D005195 1.7e-45 186.8 164 55.5
Aa31LG9G11860 Aethionema arabicum HOM05D004360 ORTHO05D005195 2.2e-45 186.4 208 51.4
Rhsim12G0001800 Rhododendron simsii HOM05D004360 ORTHO05D005195 6.3e-45 184.9 225 47.6
AagrBONN_evm.TU.Sc2ySwM_368.413 Anthoceros agrestis HOM05D004360 ORTHO05D005195 3.1e-44 182.6 141 63.8
BolC2t10286H Brassica oleracea HOM05D004360 ORTHO05D005195 3.1e-44 182.6 142 64.8
BraA09t38441Z Brassica rapa HOM05D004360 ORTHO05D005195 3.1e-44 182.6 210 48.6
Sabra13G0081200 Salix brachista HOM05D004360 ORTHO05D005195 4.5e-43 178.7 130 68.5
BcaC04g21022 Brassica carinata HOM05D004360 ORTHO05D005195 5.9e-43 178.3 134 65.7
CiPaw.03G012600 Carya illinoinensis HOM05D004360 ORTHO05D005195 1.0e-42 177.6 130 66.9
Sc06g0000070 Simmondsia chinensis HOM05D004360 ORTHO05D005195 1.7e-42 176.8 130 66.9
Haze_14005 Corylus avellana HOM05D004360 ORTHO05D005195 2.2e-42 176.4 129 68.2
Duzib116G0205 Durio zibethinus HOM05D004360 ORTHO05D005195 2.2e-42 176.4 125 70.4
BolC9t56489H Brassica oleracea HOM05D004360 ORTHO05D005195 2.9e-42 176.0 174 54.0
CARHR032930 Cardamine hirsuta HOM05D004360 ORTHO05D005195 1.5e-41 173.7 130 66.9
AT1G33490 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 4.2e-41 172.2 130 67.7
Sp1g28930 Schrenkiella parvula HOM05D004360 ORTHO05D002912 1.2e-40 170.6 130 65.4
Migut.C01399 Erythranthe guttata HOM05D004360 ORTHO05D005195 4.7e-40 168.7 126 64.3
Pp3c17_19860 Physcomitrium patens HOM05D004360 ORTHO05D005195 6.1e-40 168.3 158 51.3
Mapoly0022s0158 Marchantia polymorpha HOM05D004360 ORTHO05D005195 1.4e-39 167.2 149 55.0
Pp3c23_11640 Physcomitrium patens HOM05D004360 ORTHO05D005195 5.2e-39 165.2 158 51.9
CBR_g61487 Chara braunii HOM05D004360 ORTHO05D005195 1.2e-38 164.1 177 51.4
DCAR_003506 Daucus carota HOM05D005117 ORTHO05D005956 2.6e-38 162.9 125 62.4
SMO143G0101 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 4.4e-38 162.2 166 48.8
SMO356G0006 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 1.1e-36 157.5 152 50.7
Ah.05g170480 Amaranthus hybridus HOM05D004360 ORTHO05D005195 7.0e-36 154.8 132 61.4
SHI16862 Sapria himalayana HOM05D004360 ORTHO05D005195 7.0e-36 154.8 136 61.0
PSO210G7326 Papaver somniferum HOM05D004360 ORTHO05D005195 1.6e-35 153.7 130 60.8
BcaB01g01456 Brassica carinata HOM05D004360 ORTHO05D005195 5.9e-35 151.8 155 55.5
Dinv37400 Davidia involucrata HOM05D004360 ORTHO05D005195 1.3e-34 150.6 123 63.4
SEGI_01847 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 1.3e-34 150.6 189 44.4
TPR.G4421 Trifolium pratense HOM05D004360 ORTHO05D001407 1.7e-34 150.2 130 60.8
unitig_578.g16114 Utricularia gibba HOM05D004360 ORTHO05D005195 5.9e-27 125.2 120 54.2
BcaB01g01455 Brassica carinata HOM05D004360 ORTHO05D005195 1.1e-25 120.9 95 63.2
ECA246G3009 Erigeron canadensis HOM05D004360 ORTHO05D005195 2.3e-23 113.2 100 56.0
TAR375G0667 Trochodendron aralioides HOM05D004360 ORTHO05D005195 1.3e-21 107.5 110 55.5
HanXRQChr09g0244511 Helianthus annuus HOM05D004360 ORTHO05D005195 1.7e-18 97.1 90 55.6
FAN24G1049 Fragaria x ananassa HOM05D004360 ORTHO05D005195 1.1e-17 94.4 150 38.7
Pp3c14_12450 Physcomitrium patens HOM05D004360 ORTHO05D005195 5.8e-14 82.0 96 39.6
TPR.G39583 Trifolium pratense HOM05D004360 ORTHO05D005195 1.6e-08 63.9 49 57.1
arahy.Tifrunner.gnm1.ann1.B7FYB2 Arachis hypogaea HOM05D001689 ORTHO05D001643 6.2e-08 62.0 44 65.9
Dinv02982 Davidia involucrata HOM05D004360 ORTHO05D005195 6.2e-08 62.0 46 67.4
Dinv17160 Davidia involucrata HOM05D004360 ORTHO05D005195 6.2e-08 62.0 46 67.4
Dinv08764 Davidia involucrata HOM05D004360 ORTHO05D005195 1.8e-07 60.5 46 65.2
Dinv04074 Davidia involucrata HOM05D004360 ORTHO05D005195 4.0e-07 59.3 47 63.8


User provided reference genes

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