Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09601 Sequoiadendron giganteum HOM05D004684 ORTHO05D006904 8.7e-54 213.4 108 100.0
SEGI_18338 Sequoiadendron giganteum HOM05D004684 ORTHO05D006904 2.5e-29 132.1 69 91.3
ECA248G0897 Erigeron canadensis HOM05D004684 ORTHO05D006904 2.4e-27 125.6 69 84.1
Solyc09g090840.3 Solanum lycopersicum HOM05D004684 ORTHO05D006904 3.1e-27 125.2 69 84.1
PGSC0003DMG400001555 Solanum tuberosum HOM05D004684 ORTHO05D006904 3.1e-27 125.2 69 84.1
Eucgr.H02859 Eucalyptus grandis HOM05D004684 ORTHO05D006904 6.9e-27 124.0 69 82.6
AagrBONN_evm.TU.Sc2ySwM_368.913 Anthoceros agrestis HOM05D004684 ORTHO05D006904 9.1e-27 123.6 69 82.6
CARHR100400 Cardamine hirsuta HOM05D004684 ORTHO05D006904 9.1e-27 123.6 69 82.6
Duzib212G0777 Durio zibethinus HOM05D004684 ORTHO05D006904 9.1e-27 123.6 69 82.6
Duzib151G0232 Durio zibethinus HOM05D004684 ORTHO05D006904 1.2e-26 123.2 69 81.2
Lsat_1_v5_gn_1_75460 Lactuca sativa HOM05D004684 ORTHO05D006904 1.2e-26 123.2 69 82.6
CANSAT78G0903 Cannabis sativa HOM05D004684 ORTHO05D006904 1.5e-26 122.9 69 82.6
Lj3A639G13 Lonicera japonica HOM05D004684 ORTHO05D006904 1.5e-26 122.9 69 84.1
Mapoly0107s0036 Marchantia polymorpha HOM05D004684 ORTHO05D006904 1.5e-26 122.9 69 82.6
PSO384G0234 Papaver somniferum HOM05D004684 ORTHO05D006904 1.5e-26 122.9 69 82.6
Sopen09g033800 Solanum pennellii HOM05D004684 ORTHO05D006904 1.5e-26 122.9 69 82.6
CAN.G812.19 Capsicum annuum HOM05D004684 ORTHO05D006904 2.0e-26 122.5 81 72.8
PSO832G1147 Papaver somniferum HOM05D004684 ORTHO05D006904 2.0e-26 122.5 69 81.2
RcHm_v2.0_Chr7g0203561 Rosa chinensis HOM05D004684 ORTHO05D006904 2.0e-26 122.5 69 81.2
HPP92_005111 Vanilla planifolia HOM05D004684 ORTHO05D006904 2.0e-26 122.5 69 84.1
Aqoxy5G00132 Aquilegia oxysepala HOM05D004684 ORTHO05D006904 2.6e-26 122.1 69 82.6
CDE02G2675 Ceratophyllum demersum HOM05D004684 ORTHO05D006904 2.6e-26 122.1 69 82.6
Nitab4.5_0001041g0120 Nicotiana tabacum HOM05D004684 ORTHO05D006904 2.6e-26 122.1 81 72.8
Nitab4.5_0005154g0090 Nicotiana tabacum HOM05D004684 ORTHO05D006904 2.6e-26 122.1 81 72.8
Prupe.1G050600 Prunus persica HOM05D004684 ORTHO05D006904 2.6e-26 122.1 81 72.8
Rhsim04G0170900 Rhododendron simsii HOM05D004684 ORTHO05D006904 2.6e-26 122.1 69 82.6
Actinidia20844 Actinidia chinensis HOM05D004684 ORTHO05D006904 3.4e-26 121.7 69 82.6
CSS0041578 Camellia sinensis var. sinensis HOM05D004684 ORTHO05D006904 3.4e-26 121.7 69 82.6
CSS0049189 Camellia sinensis var. sinensis HOM05D004684 ORTHO05D006904 3.4e-26 121.7 69 82.6
Cpa.g.sc59.16 Carica papaya HOM05D004684 ORTHO05D006904 3.4e-26 121.7 69 82.6
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 3.4e-26 121.7 69 81.2
Manes.03G157750 Manihot esculenta HOM05D004684 ORTHO05D006904 3.4e-26 121.7 69 81.2
Ah.04g153790 Amaranthus hybridus HOM05D004684 ORTHO05D006904 4.5e-26 121.3 69 81.2
Sp3g22110 Schrenkiella parvula HOM05D004684 ORTHO05D006904 4.5e-26 121.3 69 81.2
Thecc.04G266300 Theobroma cacao HOM05D004684 ORTHO05D006904 4.5e-26 121.3 69 81.2
ATR0787G095 Amborella trichopoda HOM05D004684 ORTHO05D006904 5.9e-26 120.9 69 82.6
A03p43590 Brassica napus HOM05D004684 ORTHO05D006904 5.9e-26 120.9 69 81.2
BraA03t13496Z Brassica rapa HOM05D004684 ORTHO05D006904 5.9e-26 120.9 69 81.2
Ca_04899_v3 Cicer arietinum L. HOM05D004684 ORTHO05D006904 5.9e-26 120.9 69 82.6
Thhalv10002467m.g Eutrema salsugineum HOM05D004684 ORTHO05D006904 5.9e-26 120.9 69 79.7
Gohir.A09G231100 Gossypium hirsutum HOM05D004684 ORTHO05D006904 5.9e-26 120.9 69 79.7
Gohir.D09G232200 Gossypium hirsutum HOM05D004684 ORTHO05D006904 5.9e-26 120.9 69 79.7
Gorai.006G255000 Gossypium raimondii HOM05D004684 ORTHO05D006904 5.9e-26 120.9 69 79.7
Lalb_Chr09g0330801 Lupinus albus HOM05D004684 ORTHO05D006904 5.9e-26 120.9 69 82.6
MD16G1228500 Malus domestica HOM05D004684 ORTHO05D006904 5.9e-26 120.9 81 71.6
Medtr5g055940 Medicago truncatula HOM05D004684 ORTHO05D006904 5.9e-26 120.9 69 82.6
Sed0004125 Sechium edule HOM05D004684 ORTHO05D006904 5.9e-26 120.9 69 82.6
EL10Ac3g06680 Beta vulgaris HOM05D004684 ORTHO05D006904 7.7e-26 120.6 84 69.0
AUR62015690 Chenopodium quinoa HOM05D004684 ORTHO05D006904 7.7e-26 120.6 113 56.6
Migut.G00560 Erythranthe guttata HOM05D004684 ORTHO05D006904 7.7e-26 120.6 81 71.6
FvH4_4g05030 Fragaria vesca HOM05D004684 ORTHO05D006904 7.7e-26 120.6 81 71.6
FAN12G2037 Fragaria x ananassa HOM05D004684 ORTHO05D006904 7.7e-26 120.6 81 71.6
HanXRQChr01g0023061 Helianthus annuus HOM05D004684 ORTHO05D006904 7.7e-26 120.6 69 81.2
MBI07_g08913_MAGBIO Magnolia biondii HOM05D004684 ORTHO05D006904 7.7e-26 120.6 69 81.2
PGR031G2768 Punica granatum HOM05D004684 ORTHO05D006904 7.7e-26 120.6 69 79.7
Sc19g0005610 Simmondsia chinensis HOM05D004684 ORTHO05D006904 7.7e-26 120.6 69 82.6
THA.LOC104804573 Tarenaya hassleriana HOM05D004684 ORTHO05D006904 7.7e-26 120.6 69 81.2
THA.LOC104808741 Tarenaya hassleriana HOM05D004684 ORTHO05D006904 7.7e-26 120.6 69 79.7
Zm00001eb197630 Zea mays HOM05D004684 ORTHO05D006904 7.7e-26 120.6 69 82.6
Carub.0003s2695 Capsella rubella HOM05D004684 ORTHO05D006904 1.0e-25 120.2 69 81.2
Cfa014797 Carpinus fangiana HOM05D004684 ORTHO05D006904 1.0e-25 120.2 81 72.8
ClCG06G007290 Citrullus lanatus HOM05D004684 ORTHO05D006904 1.0e-25 120.2 81 72.8
Ciclev10004652m.g Citrus clementina HOM05D004684 ORTHO05D006904 1.0e-25 120.2 69 81.2
Haze_11481 Corylus avellana HOM05D004684 ORTHO05D006904 1.0e-25 120.2 81 72.8
CsaV3_2G012390 Cucumis sativus L. HOM05D004684 ORTHO05D006904 1.0e-25 120.2 81 72.8
Nn1g02992 Nelumbo nucifera HOM05D004684 ORTHO05D006904 1.0e-25 120.2 69 81.2
QL06p021563 Quercus lobata HOM05D004684 ORTHO05D006904 1.0e-25 120.2 81 71.6
TPR.G38256 Trifolium pratense HOM05D004684 ORTHO05D006904 1.0e-25 120.2 69 81.2
TWI09G1097 Tripterygium wilfordii HOM05D004684 ORTHO05D006904 1.0e-25 120.2 69 78.3
AT1G48520 Arabidopsis thaliana HOM05D004684 ORTHO05D006904 1.3e-25 119.8 69 79.7
arahy.Tifrunner.gnm1.ann1.1TG9FP Arachis hypogaea HOM05D004684 ORTHO05D006904 1.3e-25 119.8 69 79.7
CiPaw.01G176700 Carya illinoinensis HOM05D004684 ORTHO05D006904 1.3e-25 119.8 81 71.6
AUR62031623 Chenopodium quinoa HOM05D004684 ORTHO05D006904 1.3e-25 119.8 113 56.6
Glyma.05G240000 Glycine max HOM05D004684 ORTHO05D006904 1.3e-25 119.8 81 71.6
Glyma.08G047100 Glycine max HOM05D004684 ORTHO05D006904 1.3e-25 119.8 81 71.6
Lj4g0011200 Lotus japonicus HOM05D004684 ORTHO05D006904 1.3e-25 119.8 69 79.7
Lj4g0013294 Lotus japonicus HOM05D004684 ORTHO05D006904 1.3e-25 119.8 69 79.7
Potri.008G172700 Populus trichocarpa HOM05D004684 ORTHO05D006904 1.3e-25 119.8 69 78.3
Sabra10G0042300 Salix brachista HOM05D004684 ORTHO05D006904 1.3e-25 119.8 69 78.3
vmacro08564 Vaccinium macrocarpon HOM05D004684 ORTHO05D006904 1.3e-25 119.8 69 81.2
VMungo0251G0467 Vigna mungo HOM05D004684 ORTHO05D006904 1.3e-25 119.8 81 71.6
BcaC01g03327 Brassica carinata HOM05D004684 ORTHO05D006904 1.7e-25 119.4 69 79.7
C03p53620 Brassica napus HOM05D004684 ORTHO05D006904 1.7e-25 119.4 69 79.7
BolC3t17622H Brassica oleracea HOM05D004684 ORTHO05D006904 1.7e-25 119.4 69 79.7
SalBow2G2567 Salvia bowleyana HOM05D004684 ORTHO05D006904 1.7e-25 119.4 81 71.6
Hund24872 Selenicereus undatus HOM05D004684 ORTHO05D006904 1.7e-25 119.4 70 78.6
TAR636G2335 Trochodendron aralioides HOM05D002740 ORTHO05D003126 1.7e-25 119.4 69 81.2
arahy.Tifrunner.gnm1.ann1.14QJGF Arachis hypogaea HOM05D004684 ORTHO05D006904 2.2e-25 119.0 81 70.4
Dinv29794 Davidia involucrata HOM05D004684 ORTHO05D006904 2.2e-25 119.0 67 82.1
FAN22G2229 Fragaria x ananassa HOM05D004684 ORTHO05D006904 2.2e-25 119.0 68 82.4
Os11g0544800 Oryza sativa ssp. japonica HOM05D004684 ORTHO05D006904 2.2e-25 119.0 69 81.2
Phvul.002G322100 Phaseolus vulgaris HOM05D004684 ORTHO05D006904 2.2e-25 119.0 81 70.4
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 2.9e-25 118.6 107 53.3
Lalb_Chr05g0222141 Lupinus albus HOM05D004684 ORTHO05D006904 5.0e-25 117.9 69 79.7
GSVIVG01027938001 Vitis vinifera HOM05D004684 ORTHO05D006904 5.0e-25 117.9 66 84.8
AL3G43250 Arabidopsis lyrata HOM05D004684 ORTHO05D006904 1.1e-24 116.7 69 78.3
CBR_g20386 Chara braunii HOM05D004684 ORTHO05D006904 1.4e-24 116.3 69 75.4
MELO3C023021.2 Cucumis melo HOM05D004684 ORTHO05D006904 1.4e-24 116.3 81 71.6
Oeu059392.1 Olea europaea HOM05D004684 ORTHO05D006904 3.2e-24 115.2 77 71.4
Eucgr.G01176 Eucalyptus grandis HOM05D004684 ORTHO05D006904 4.2e-24 114.8 64 82.8
SMO147G0416 Selaginella moellendorffii HOM05D004684 ORTHO05D006904 9.4e-24 113.6 69 73.9
SMO273G0058 Selaginella moellendorffii HOM05D004684 ORTHO05D006904 9.4e-24 113.6 69 73.9
Rhsim02G0163300 Rhododendron simsii HOM05D004684 ORTHO05D006904 1.2e-23 113.2 108 54.6
Aa31LG8G11000 Aethionema arabicum HOM05D004684 ORTHO05D006904 2.1e-23 112.5 64 81.2
Nitab4.5_0022682g0010 Nicotiana tabacum HOM05D004684 ORTHO05D006904 1.8e-22 109.4 81 66.7
MD13G1223700 Malus domestica HOM05D004684 ORTHO05D006904 8.8e-22 107.1 70 75.7
MCO15G005 Micromonas commoda HOM05D004684 ORTHO05D006904 4.8e-20 101.3 68 70.6
PRCOL_00005018 Prasinoderma coloniale HOM05D004684 ORTHO05D006904 6.3e-20 100.9 101 54.5
MELO3C023047.2 Cucumis melo HOM05D004684 ORTHO05D006904 5.3e-19 97.8 81 63.0
Peaxi162Scf00531g00034 Petunia axillaris HOM05D004684 ORTHO05D006904 2.6e-18 95.5 62 74.2
QL02p071976 Quercus lobata HOM05D004684 ORTHO05D006904 4.5e-18 94.7 59 76.3
RcHm_v2.0_Chr4g0395911 Rosa chinensis HOM05D004684 ORTHO05D006904 1.7e-17 92.8 53 79.2
BcaB03g14590 Brassica carinata HOM05D004684 ORTHO05D006904 8.5e-17 90.5 53 75.5
Cc03_g06430 Coffea canephora HOM05D004684 ORTHO05D006904 2.5e-16 89.0 52 76.9
Phvul.002G091800 Phaseolus vulgaris HOM05D004684 ORTHO05D006904 4.7e-15 84.7 90 53.3
Pp3s32_289 Physcomitrium patens HOM05D004684 ORTHO05D006904 5.2e-14 81.3 79 50.6
unitig_748.g8291 Utricularia gibba HOM05D004684 ORTHO05D006904 2.8e-12 75.5 48 75.0
MCO02G423 Micromonas commoda HOM05D004684 ORTHO05D006904 9.1e-11 70.5 60 55.0
Psat2g046760 Pisum sativum HOM05D004684 ORTHO05D006904 6.1e-07 57.8 31 83.9
arahy.Tifrunner.gnm1.ann1.PGR81E Arachis hypogaea HOM05D004684 ORTHO05D082538 8.0e-07 57.4 43 60.5
Potri.010G064700 Populus trichocarpa HOM05D004684 ORTHO05D006904 1.4e-06 56.6 53 52.8
arahy.Tifrunner.gnm1.ann1.G7A5RV Arachis hypogaea HOM05D004684 ORTHO05D083069 6.7e-06 54.3 38 63.2


User provided reference genes

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