Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_09560 Sequoiadendron giganteum HOM05D001775 ORTHO05D008700 6.9e-69 263.8 132 100.0
Hma1.2p1_1578F.1_g291820 Hydrangea macrophylla HOM05D001775 ORTHO05D008700 4.7e-09 65.1 85 43.5
Cpa.g.sc5.118 Carica papaya HOM05D001775 ORTHO05D008700 1.0e-08 63.9 93 43.0
Ciclev10012638m.g Citrus clementina HOM05D001775 ORTHO05D008700 4.0e-08 62.0 90 42.2
MD12G1101900 Malus domestica HOM05D001775 ORTHO05D008700 5.2e-08 61.6 70 48.6
Nn2g13922 Nelumbo nucifera HOM05D001775 ORTHO05D008700 8.8e-08 60.8 49 59.2
Duzib106G0620 Durio zibethinus HOM05D001775 ORTHO05D008700 1.2e-07 60.5 49 59.2
CANSAT25G3870 Cannabis sativa HOM05D001775 ORTHO05D008700 1.5e-07 60.1 59 50.8
SalBow3G4002 Salvia bowleyana HOM05D001775 ORTHO05D008700 1.5e-07 60.1 97 42.3
Thecc.05G076600 Theobroma cacao HOM05D001775 ORTHO05D008700 1.5e-07 60.1 49 61.2
Atru.chr8.1674 Acer truncatum HOM05D001775 ORTHO05D008700 2.0e-07 59.7 95 34.7
PGR142G0224 Punica granatum HOM05D001775 ORTHO05D008700 2.0e-07 59.7 52 57.7
Aqoxy2G01547 Aquilegia oxysepala HOM05D001775 ORTHO05D008700 2.6e-07 59.3 67 50.7
MELO3C009415.2 Cucumis melo HOM05D001775 ORTHO05D008700 2.6e-07 59.3 59 49.2
Hma1.2p1_1578F.1_g291810 Hydrangea macrophylla HOM05D001775 ORTHO05D008700 2.6e-07 59.3 106 34.9
HPP92_027841 Vanilla planifolia HOM05D001775 ORTHO05D008700 3.3e-07 58.9 87 44.8
COL.COLO4_22265 Corchorus olitorius HOM05D007554 ORTHO05D008700 4.4e-07 58.5 53 54.7
CsaV3_3G036610 Cucumis sativus L. HOM05D001775 ORTHO05D008700 4.4e-07 58.5 49 61.2
THA.LOC104826941 Tarenaya hassleriana HOM05D001775 ORTHO05D008700 4.4e-07 58.5 90 43.3
RcHm_v2.0_Chr3g0471471 Rosa chinensis HOM05D001775 ORTHO05D008700 5.7e-07 58.2 71 46.5
Manes.09G047800 Manihot esculenta HOM05D001775 ORTHO05D008700 7.5e-07 57.8 49 63.3
Solyc09g008650.3 Solanum lycopersicum HOM05D001775 ORTHO05D008700 7.5e-07 57.8 104 41.3
CiPaw.09G005800 Carya illinoinensis HOM05D001775 ORTHO05D008700 9.7e-07 57.4 68 42.6
Lj5g0004178 Lotus japonicus HOM05D001775 ORTHO05D008700 9.7e-07 57.4 86 40.7
Potri.016G096600 Populus trichocarpa HOM05D001775 ORTHO05D008700 9.7e-07 57.4 67 49.3
Sabra16G0099800 Salix brachista HOM05D001775 ORTHO05D008700 1.3e-06 57.0 90 36.7
Sopen09g003450 Solanum pennellii HOM05D001775 ORTHO05D008700 1.3e-06 57.0 104 40.4
SGA_v2.0_scaffold75G24814 Striga asiatica HOM05D001775 ORTHO05D008700 1.3e-06 57.0 81 43.2
PSO339G2214 Papaver somniferum HOM05D001775 ORTHO05D008700 1.7e-06 56.6 90 38.9
Sabra16G0099900 Salix brachista HOM05D001775 ORTHO05D008700 1.7e-06 56.6 98 37.8
Prupe.7G122200 Prunus persica HOM05D000031 ORTHO05D001864 2.2e-06 56.2 49 59.2
CAN.G1830.11 Capsicum annuum HOM05D001775 ORTHO05D008700 2.8e-06 55.8 74 44.6
PSO801G0321 Papaver somniferum HOM05D001775 ORTHO05D008700 2.8e-06 55.8 102 40.2
QL07p041198 Quercus lobata HOM05D001775 ORTHO05D008700 2.8e-06 55.8 87 39.1
FvH4_6g17331 Fragaria vesca HOM05D001775 ORTHO05D008700 3.7e-06 55.5 71 45.1
FAN14G0141 Fragaria x ananassa HOM05D000031 ORTHO05D001864 3.7e-06 55.5 71 45.1
AL3G21390 Arabidopsis lyrata HOM05D001775 ORTHO05D008700 4.8e-06 55.1 49 57.1
DCAR_017644 Daucus carota HOM05D001775 ORTHO05D008700 4.8e-06 55.1 50 58.0
Gohir.A01G211700 Gossypium hirsutum HOM05D001775 ORTHO05D008700 4.8e-06 55.1 49 57.1
Gohir.D01G200500 Gossypium hirsutum HOM05D001775 ORTHO05D008700 4.8e-06 55.1 49 57.1
Gorai.002G245200 Gossypium raimondii HOM05D001775 ORTHO05D008700 4.8e-06 55.1 49 57.1
FAN02G3766 Fragaria x ananassa HOM05D000031 ORTHO05D001864 6.3e-06 54.7 67 46.3
Nitab4.5_0004281g0100 Nicotiana tabacum HOM05D001775 ORTHO05D008700 6.3e-06 54.7 53 54.7
Mapoly0135s0005 Marchantia polymorpha HOM05D001775 ORTHO05D008700 8.2e-06 54.3 59 49.2
TWI77G0546 Tripterygium wilfordii HOM05D001775 ORTHO05D008700 8.2e-06 54.3 49 55.1


User provided reference genes

Program Settings